data_4ITH # _model_server_result.job_id NvXGQEC2u8LUzzhtIYUH2g _model_server_result.datetime_utc '2025-01-10 12:03:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ith # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":306}' # _entry.id 4ITH # _exptl.entry_id 4ITH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ITH _cell.length_a 47.128 _cell.length_b 93.605 _cell.length_c 129.07 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ITH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,Q 1 1 B,J,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 O N N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4ITH _atom_sites.fract_transf_matrix[1][1] 0.021219 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007748 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IOD A 1 301 1 IOD IOD . D 2 IOD A 1 302 2 IOD IOD . E 2 IOD A 1 303 3 IOD IOD . F 2 IOD A 1 304 4 IOD IOD . G 2 IOD A 1 305 10 IOD IOD . H 3 NA A 1 306 1 NA NA . I 4 RCM A 1 307 1 RCM RCM . J 2 IOD B 1 301 5 IOD IOD . K 2 IOD B 1 302 6 IOD IOD . L 2 IOD B 1 303 7 IOD IOD . M 2 IOD B 1 304 8 IOD IOD . N 2 IOD B 1 305 9 IOD IOD . O 3 NA B 1 306 2 NA NA . P 4 RCM B 1 307 2 RCM RCM . Q 5 HOH A 1 401 1 HOH HOH . Q 5 HOH A 2 402 2 HOH HOH . Q 5 HOH A 3 403 3 HOH HOH . Q 5 HOH A 4 404 4 HOH HOH . Q 5 HOH A 5 405 5 HOH HOH . Q 5 HOH A 6 406 10 HOH HOH . Q 5 HOH A 7 407 13 HOH HOH . Q 5 HOH A 8 408 16 HOH HOH . Q 5 HOH A 9 409 17 HOH HOH . Q 5 HOH A 10 410 19 HOH HOH . Q 5 HOH A 11 411 20 HOH HOH . Q 5 HOH A 12 412 23 HOH HOH . Q 5 HOH A 13 413 24 HOH HOH . Q 5 HOH A 14 414 26 HOH HOH . Q 5 HOH A 15 415 27 HOH HOH . Q 5 HOH A 16 416 28 HOH HOH . Q 5 HOH A 17 417 29 HOH HOH . Q 5 HOH A 18 418 31 HOH HOH . Q 5 HOH A 19 419 34 HOH HOH . Q 5 HOH A 20 420 35 HOH HOH . Q 5 HOH A 21 421 37 HOH HOH . Q 5 HOH A 22 422 39 HOH HOH . Q 5 HOH A 23 423 41 HOH HOH . Q 5 HOH A 24 424 42 HOH HOH . Q 5 HOH A 25 425 44 HOH HOH . Q 5 HOH A 26 426 46 HOH HOH . Q 5 HOH A 27 427 49 HOH HOH . Q 5 HOH A 28 428 50 HOH HOH . Q 5 HOH A 29 429 52 HOH HOH . Q 5 HOH A 30 430 53 HOH HOH . Q 5 HOH A 31 431 54 HOH HOH . Q 5 HOH A 32 432 55 HOH HOH . Q 5 HOH A 33 433 58 HOH HOH . Q 5 HOH A 34 434 59 HOH HOH . Q 5 HOH A 35 435 60 HOH HOH . Q 5 HOH A 36 436 62 HOH HOH . Q 5 HOH A 37 437 63 HOH HOH . Q 5 HOH A 38 438 65 HOH HOH . Q 5 HOH A 39 439 66 HOH HOH . Q 5 HOH A 40 440 68 HOH HOH . Q 5 HOH A 41 441 70 HOH HOH . Q 5 HOH A 42 442 71 HOH HOH . Q 5 HOH A 43 443 72 HOH HOH . Q 5 HOH A 44 444 73 HOH HOH . Q 5 HOH A 45 445 75 HOH HOH . Q 5 HOH A 46 446 76 HOH HOH . Q 5 HOH A 47 447 77 HOH HOH . Q 5 HOH A 48 448 79 HOH HOH . Q 5 HOH A 49 449 80 HOH HOH . Q 5 HOH A 50 450 82 HOH HOH . Q 5 HOH A 51 451 83 HOH HOH . Q 5 HOH A 52 452 84 HOH HOH . Q 5 HOH A 53 453 85 HOH HOH . Q 5 HOH A 54 454 86 HOH HOH . Q 5 HOH A 55 455 87 HOH HOH . Q 5 HOH A 56 456 89 HOH HOH . Q 5 HOH A 57 457 90 HOH HOH . Q 5 HOH A 58 458 95 HOH HOH . Q 5 HOH A 59 459 110 HOH HOH . Q 5 HOH A 60 460 111 HOH HOH . Q 5 HOH A 61 461 112 HOH HOH . Q 5 HOH A 62 462 113 HOH HOH . Q 5 HOH A 63 463 114 HOH HOH . Q 5 HOH A 64 464 115 HOH HOH . Q 5 HOH A 65 465 130 HOH HOH . Q 5 HOH A 66 466 131 HOH HOH . R 5 HOH B 1 401 6 HOH HOH . R 5 HOH B 2 402 7 HOH HOH . R 5 HOH B 3 403 8 HOH HOH . R 5 HOH B 4 404 9 HOH HOH . R 5 HOH B 5 405 11 HOH HOH . R 5 HOH B 6 406 12 HOH HOH . R 5 HOH B 7 407 14 HOH HOH . R 5 HOH B 8 408 15 HOH HOH . R 5 HOH B 9 409 18 HOH HOH . R 5 HOH B 10 410 21 HOH HOH . R 5 HOH B 11 411 22 HOH HOH . R 5 HOH B 12 412 25 HOH HOH . R 5 HOH B 13 413 30 HOH HOH . R 5 HOH B 14 414 32 HOH HOH . R 5 HOH B 15 415 33 HOH HOH . R 5 HOH B 16 416 36 HOH HOH . R 5 HOH B 17 417 38 HOH HOH . R 5 HOH B 18 418 40 HOH HOH . R 5 HOH B 19 419 43 HOH HOH . R 5 HOH B 20 420 45 HOH HOH . R 5 HOH B 21 421 47 HOH HOH . R 5 HOH B 22 422 48 HOH HOH . R 5 HOH B 23 423 51 HOH HOH . R 5 HOH B 24 424 56 HOH HOH . R 5 HOH B 25 425 57 HOH HOH . R 5 HOH B 26 426 61 HOH HOH . R 5 HOH B 27 427 64 HOH HOH . R 5 HOH B 28 428 67 HOH HOH . R 5 HOH B 29 429 69 HOH HOH . R 5 HOH B 30 430 74 HOH HOH . R 5 HOH B 31 431 78 HOH HOH . R 5 HOH B 32 432 81 HOH HOH . R 5 HOH B 33 433 88 HOH HOH . R 5 HOH B 34 434 91 HOH HOH . R 5 HOH B 35 435 92 HOH HOH . R 5 HOH B 36 436 93 HOH HOH . R 5 HOH B 37 437 94 HOH HOH . R 5 HOH B 38 438 96 HOH HOH . R 5 HOH B 39 439 97 HOH HOH . R 5 HOH B 40 440 98 HOH HOH . R 5 HOH B 41 441 99 HOH HOH . R 5 HOH B 42 442 100 HOH HOH . R 5 HOH B 43 443 101 HOH HOH . R 5 HOH B 44 444 102 HOH HOH . R 5 HOH B 45 445 103 HOH HOH . R 5 HOH B 46 446 104 HOH HOH . R 5 HOH B 47 447 105 HOH HOH . R 5 HOH B 48 448 106 HOH HOH . R 5 HOH B 49 449 107 HOH HOH . R 5 HOH B 50 450 108 HOH HOH . R 5 HOH B 51 451 109 HOH HOH . R 5 HOH B 52 452 116 HOH HOH . R 5 HOH B 53 453 117 HOH HOH . R 5 HOH B 54 454 118 HOH HOH . R 5 HOH B 55 455 119 HOH HOH . R 5 HOH B 56 456 120 HOH HOH . R 5 HOH B 57 457 121 HOH HOH . R 5 HOH B 58 458 122 HOH HOH . R 5 HOH B 59 459 123 HOH HOH . R 5 HOH B 60 460 124 HOH HOH . R 5 HOH B 61 461 125 HOH HOH . R 5 HOH B 62 462 126 HOH HOH . R 5 HOH B 63 463 127 HOH HOH . R 5 HOH B 64 464 128 HOH HOH . R 5 HOH B 65 465 129 HOH HOH . R 5 HOH B 66 466 132 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 3 _atom_site.Cartn_x -28.639 _atom_site.Cartn_y -35.902 _atom_site.Cartn_z 32.489 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 306 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #