data_4IVO
#
_model_server_result.job_id            XdKlSANJXJHDVyh9CtIdTw 
_model_server_result.datetime_utc      '2024-12-26 13:51:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ivo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    4IVO 
#
_exptl.entry_id    4IVO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4IVO 
_cell.length_a            135.809 
_cell.length_b            135.809 
_cell.length_c            158.338 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4IVO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 11_444 x-y-1/3,-y-2/3,-z-2/3 1 0 0 0 -1 0 0 0 -1 0 -78.409363 -105.558667 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 115 n n 
PA O2A FAD sing 116 n n 
PA O5B FAD sing 117 n n 
PA O3P FAD sing 118 n n 
O2A HOA2 FAD sing 119 n n 
O5B C5B FAD sing 120 n n 
C5B C4B FAD sing 121 n n 
C5B H51A FAD sing 122 n n 
C5B H52A FAD sing 123 n n 
C4B O4B FAD sing 124 n n 
C4B C3B FAD sing 125 n n 
C4B H4B FAD sing 126 n n 
O4B C1B FAD sing 127 n n 
C3B O3B FAD sing 128 n n 
C3B C2B FAD sing 129 n n 
C3B H3B FAD sing 130 n n 
O3B HO3A FAD sing 131 n n 
C2B O2B FAD sing 132 n n 
C2B C1B FAD sing 133 n n 
C2B H2B FAD sing 134 n n 
O2B HO2A FAD sing 135 n n 
C1B N9A FAD sing 136 n n 
C1B H1B FAD sing 137 n n 
N9A C8A FAD sing 138 n y 
N9A C4A FAD sing 139 n y 
C8A N7A FAD doub 140 n y 
C8A H8A FAD sing 141 n n 
N7A C5A FAD sing 142 n y 
C5A C6A FAD sing 143 n y 
C5A C4A FAD doub 144 n y 
C6A N6A FAD sing 145 n n 
C6A N1A FAD doub 146 n y 
N6A H61A FAD sing 147 n n 
N6A H62A FAD sing 148 n n 
N1A C2A FAD sing 149 n y 
C2A N3A FAD doub 150 n y 
C2A H2A FAD sing 151 n n 
N3A C4A FAD sing 152 n y 
N1 C2 FAD sing 153 n n 
N1 C10 FAD doub 154 n n 
C2 O2 FAD doub 155 n n 
C2 N3 FAD sing 156 n n 
N3 C4 FAD sing 157 n n 
N3 HN3 FAD sing 158 n n 
C4 O4 FAD doub 159 n n 
C4 C4X FAD sing 160 n n 
C4X N5 FAD doub 161 n n 
C4X C10 FAD sing 162 n n 
N5 C5X FAD sing 163 n n 
C5X C6 FAD doub 164 n y 
C5X C9A FAD sing 165 n y 
C6 C7 FAD sing 166 n y 
C6 H6 FAD sing 167 n n 
C7 C7M FAD sing 168 n n 
C7 C8 FAD doub 169 n y 
C7M HM71 FAD sing 170 n n 
C7M HM72 FAD sing 171 n n 
C7M HM73 FAD sing 172 n n 
C8 C8M FAD sing 173 n n 
C8 C9 FAD sing 174 n y 
C8M HM81 FAD sing 175 n n 
C8M HM82 FAD sing 176 n n 
C8M HM83 FAD sing 177 n n 
C9 C9A FAD doub 178 n y 
C9 H9 FAD sing 179 n n 
C9A N10 FAD sing 180 n n 
N10 C10 FAD sing 181 n n 
N10 C1' FAD sing 182 n n 
C1' C2' FAD sing 183 n n 
C1' "H1'1" FAD sing 184 n n 
C1' "H1'2" FAD sing 185 n n 
C2' O2' FAD sing 186 n n 
C2' C3' FAD sing 187 n n 
C2' H2' FAD sing 188 n n 
O2' HO2' FAD sing 189 n n 
C3' O3' FAD sing 190 n n 
C3' C4' FAD sing 191 n n 
C3' H3' FAD sing 192 n n 
O3' HO3' FAD sing 193 n n 
C4' O4' FAD sing 194 n n 
C4' C5' FAD sing 195 n n 
C4' H4' FAD sing 196 n n 
O4' HO4' FAD sing 197 n n 
C5' O5' FAD sing 198 n n 
C5' "H5'1" FAD sing 199 n n 
C5' "H5'2" FAD sing 200 n n 
O5' P FAD sing 201 n n 
P O1P FAD doub 202 n n 
P O2P FAD sing 203 n n 
P O3P FAD sing 204 n n 
O2P HOP2 FAD sing 205 n n 
#
_atom_sites.entry_id                     4IVO 
_atom_sites.fract_transf_matrix[1][1]    0.007363 
_atom_sites.fract_transf_matrix[1][2]    0.004251 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008502 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006316 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACJ B 1 501 501 ACJ ACJ . 
C 3 FAD B 1 502 502 FAD FAD . 
D 4 GOL B 1 503 503 GOL GOL . 
E 4 GOL B 1 504 504 GOL GOL . 
F 5 HOH B 1 601 601 HOH HOH . 
F 5 HOH B 2 602 602 HOH HOH . 
F 5 HOH B 3 603 603 HOH HOH . 
F 5 HOH B 4 604 604 HOH HOH . 
F 5 HOH B 5 605 605 HOH HOH . 
F 5 HOH B 6 606 606 HOH HOH . 
F 5 HOH B 7 607 607 HOH HOH . 
F 5 HOH B 8 608 608 HOH HOH . 
F 5 HOH B 9 609 609 HOH HOH . 
F 5 HOH B 10 610 610 HOH HOH . 
F 5 HOH B 11 611 611 HOH HOH . 
F 5 HOH B 12 612 612 HOH HOH . 
F 5 HOH B 13 613 613 HOH HOH . 
F 5 HOH B 14 614 614 HOH HOH . 
F 5 HOH B 15 615 615 HOH HOH . 
F 5 HOH B 16 616 616 HOH HOH . 
F 5 HOH B 17 617 617 HOH HOH . 
F 5 HOH B 18 618 618 HOH HOH . 
F 5 HOH B 19 619 619 HOH HOH . 
F 5 HOH B 20 620 620 HOH HOH . 
F 5 HOH B 21 621 621 HOH HOH . 
F 5 HOH B 22 622 622 HOH HOH . 
F 5 HOH B 23 623 623 HOH HOH . 
F 5 HOH B 24 624 624 HOH HOH . 
F 5 HOH B 25 625 625 HOH HOH . 
F 5 HOH B 26 626 626 HOH HOH . 
F 5 HOH B 27 627 627 HOH HOH . 
F 5 HOH B 28 628 628 HOH HOH . 
F 5 HOH B 29 629 629 HOH HOH . 
F 5 HOH B 30 630 630 HOH HOH . 
F 5 HOH B 31 631 631 HOH HOH . 
F 5 HOH B 32 632 632 HOH HOH . 
F 5 HOH B 33 633 633 HOH HOH . 
F 5 HOH B 34 634 634 HOH HOH . 
F 5 HOH B 35 635 635 HOH HOH . 
F 5 HOH B 36 636 636 HOH HOH . 
F 5 HOH B 37 637 637 HOH HOH . 
F 5 HOH B 38 638 638 HOH HOH . 
F 5 HOH B 39 639 639 HOH HOH . 
F 5 HOH B 40 640 640 HOH HOH . 
F 5 HOH B 41 641 641 HOH HOH . 
F 5 HOH B 42 642 642 HOH HOH . 
F 5 HOH B 43 643 643 HOH HOH . 
F 5 HOH B 44 644 644 HOH HOH . 
F 5 HOH B 45 645 645 HOH HOH . 
F 5 HOH B 46 646 646 HOH HOH . 
F 5 HOH B 47 647 647 HOH HOH . 
F 5 HOH B 48 648 648 HOH HOH . 
F 5 HOH B 49 649 649 HOH HOH . 
F 5 HOH B 50 650 650 HOH HOH . 
F 5 HOH B 51 651 651 HOH HOH . 
F 5 HOH B 52 652 652 HOH HOH . 
F 5 HOH B 53 653 653 HOH HOH . 
F 5 HOH B 54 654 654 HOH HOH . 
F 5 HOH B 55 655 655 HOH HOH . 
F 5 HOH B 56 656 656 HOH HOH . 
F 5 HOH B 57 657 657 HOH HOH . 
F 5 HOH B 58 658 658 HOH HOH . 
F 5 HOH B 59 659 659 HOH HOH . 
F 5 HOH B 60 660 660 HOH HOH . 
F 5 HOH B 61 661 661 HOH HOH . 
F 5 HOH B 62 662 662 HOH HOH . 
F 5 HOH B 63 663 663 HOH HOH . 
F 5 HOH B 64 664 664 HOH HOH . 
F 5 HOH B 65 665 665 HOH HOH . 
F 5 HOH B 66 666 666 HOH HOH . 
F 5 HOH B 67 667 667 HOH HOH . 
F 5 HOH B 68 668 668 HOH HOH . 
F 5 HOH B 69 669 669 HOH HOH . 
F 5 HOH B 70 670 670 HOH HOH . 
F 5 HOH B 71 671 671 HOH HOH . 
F 5 HOH B 72 672 672 HOH HOH . 
F 5 HOH B 73 673 673 HOH HOH . 
F 5 HOH B 74 674 674 HOH HOH . 
F 5 HOH B 75 675 675 HOH HOH . 
F 5 HOH B 76 676 676 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 3 11.335 -25.134 -28.686 1 17.2 ? PA FAD 502 B 1 
HETATM 2 O O1A FAD . . . C 3 12.587 -24.381 -29.033 1 17.81 ? O1A FAD 502 B 1 
HETATM 3 O O2A FAD . . . C 3 11.511 -26.583 -29.086 1 21.64 ? O2A FAD 502 B 1 
HETATM 4 O O5B FAD . . . C 3 11.118 -25.003 -27.097 1 18.21 ? O5B FAD 502 B 1 
HETATM 5 C C5B FAD . . . C 3 10.188 -25.801 -26.403 1 19.1 ? C5B FAD 502 B 1 
HETATM 6 C C4B FAD . . . C 3 10.806 -26.106 -25.045 1 22.02 ? C4B FAD 502 B 1 
HETATM 7 O O4B FAD . . . C 3 9.869 -26.722 -24.18 1 20.47 ? O4B FAD 502 B 1 
HETATM 8 C C3B FAD . . . C 3 12.001 -27.044 -25.167 1 24.88 ? C3B FAD 502 B 1 
HETATM 9 O O3B FAD . . . C 3 13.17 -26.402 -24.705 1 28.49 ? O3B FAD 502 B 1 
HETATM 10 C C2B FAD . . . C 3 11.65 -28.224 -24.283 1 22.85 ? C2B FAD 502 B 1 
HETATM 11 O O2B FAD . . . C 3 12.767 -28.622 -23.531 1 21.44 ? O2B FAD 502 B 1 
HETATM 12 C C1B FAD . . . C 3 10.559 -27.665 -23.389 1 20.87 ? C1B FAD 502 B 1 
HETATM 13 N N9A FAD . . . C 3 9.679 -28.693 -22.795 1 22.75 ? N9A FAD 502 B 1 
HETATM 14 C C8A FAD . . . C 3 9.163 -29.825 -23.396 1 24.66 ? C8A FAD 502 B 1 
HETATM 15 N N7A FAD . . . C 3 8.413 -30.495 -22.483 1 25.07 ? N7A FAD 502 B 1 
HETATM 16 C C5A FAD . . . C 3 8.446 -29.815 -21.311 1 25.04 ? C5A FAD 502 B 1 
HETATM 17 C C6A FAD . . . C 3 7.866 -30.046 -20.063 1 24.16 ? C6A FAD 502 B 1 
HETATM 18 N N6A FAD . . . C 3 7.018 -31.052 -19.893 1 28.32 ? N6A FAD 502 B 1 
HETATM 19 N N1A FAD . . . C 3 8.085 -29.146 -19.033 1 26.37 ? N1A FAD 502 B 1 
HETATM 20 C C2A FAD . . . C 3 8.873 -28.027 -19.225 1 26.09 ? C2A FAD 502 B 1 
HETATM 21 N N3A FAD . . . C 3 9.445 -27.806 -20.466 1 24.99 ? N3A FAD 502 B 1 
HETATM 22 C C4A FAD . . . C 3 9.238 -28.679 -21.492 1 22.73 ? C4A FAD 502 B 1 
HETATM 23 N N1 FAD . . . C 3 13.833 -20.387 -37.547 1 20.14 ? N1 FAD 502 B 1 
HETATM 24 C C2 FAD . . . C 3 14.129 -19.204 -38.187 1 23.41 ? C2 FAD 502 B 1 
HETATM 25 O O2 FAD . . . C 3 13.387 -18.232 -38.086 1 25.58 ? O2 FAD 502 B 1 
HETATM 26 N N3 FAD . . . C 3 15.266 -19.089 -38.956 1 26.03 ? N3 FAD 502 B 1 
HETATM 27 C C4 FAD . . . C 3 16.131 -20.147 -39.108 1 27.82 ? C4 FAD 502 B 1 
HETATM 28 O O4 FAD . . . C 3 17.313 -19.891 -39.34 1 34.91 ? O4 FAD 502 B 1 
HETATM 29 C C4X FAD . . . C 3 15.837 -21.346 -38.473 1 23.7 ? C4X FAD 502 B 1 
HETATM 30 N N5 FAD . . . C 3 16.701 -22.412 -38.632 1 24.31 ? N5 FAD 502 B 1 
HETATM 31 C C5X FAD . . . C 3 16.461 -23.607 -38.002 1 19.93 ? C5X FAD 502 B 1 
HETATM 32 C C6 FAD . . . C 3 17.357 -24.674 -38.16 1 17.59 ? C6 FAD 502 B 1 
HETATM 33 C C7 FAD . . . C 3 17.125 -25.891 -37.516 1 19.86 ? C7 FAD 502 B 1 
HETATM 34 C C7M FAD . . . C 3 18.293 -26.82 -37.356 1 19.93 ? C7M FAD 502 B 1 
HETATM 35 C C8 FAD . . . C 3 15.994 -26.029 -36.706 1 22.05 ? C8 FAD 502 B 1 
HETATM 36 C C8M FAD . . . C 3 16.007 -26.989 -35.546 1 19.33 ? C8M FAD 502 B 1 
HETATM 37 C C9 FAD . . . C 3 15.108 -24.963 -36.572 1 20.29 ? C9 FAD 502 B 1 
HETATM 38 C C9A FAD . . . C 3 15.327 -23.742 -37.205 1 20.02 ? C9A FAD 502 B 1 
HETATM 39 N N10 FAD . . . C 3 14.439 -22.684 -37.052 1 16.79 ? N10 FAD 502 B 1 
HETATM 40 C C10 FAD . . . C 3 14.695 -21.472 -37.684 1 21.5 ? C10 FAD 502 B 1 
HETATM 41 C C1' FAD . . . C 3 13.077 -22.934 -36.456 1 15.52 ? C1' FAD 502 B 1 
HETATM 42 C C2' FAD . . . C 3 12.996 -22.289 -35.078 1 16.22 ? C2' FAD 502 B 1 
HETATM 43 O O2' FAD . . . C 3 14.295 -22.261 -34.511 1 15.61 ? O2' FAD 502 B 1 
HETATM 44 C C3' FAD . . . C 3 12.048 -23.038 -34.139 1 16.51 ? C3' FAD 502 B 1 
HETATM 45 O O3' FAD . . . C 3 10.763 -23.201 -34.711 1 15.69 ? O3' FAD 502 B 1 
HETATM 46 C C4' FAD . . . C 3 11.869 -22.311 -32.806 1 17.59 ? C4' FAD 502 B 1 
HETATM 47 O O4' FAD . . . C 3 13.113 -22.019 -32.207 1 16.9 ? O4' FAD 502 B 1 
HETATM 48 C C5' FAD . . . C 3 11.065 -23.192 -31.867 1 17.65 ? C5' FAD 502 B 1 
HETATM 49 O O5' FAD . . . C 3 10.851 -22.464 -30.694 1 18.19 ? O5' FAD 502 B 1 
HETATM 50 P P FAD . . . C 3 9.716 -22.916 -29.677 1 19.87 ? P FAD 502 B 1 
HETATM 51 O O1P FAD . . . C 3 9.761 -22.069 -28.431 1 20.32 ? O1P FAD 502 B 1 
HETATM 52 O O2P FAD . . . C 3 8.362 -22.758 -30.31 1 20.57 ? O2P FAD 502 B 1 
HETATM 53 O O3P FAD . . . C 3 10.006 -24.48 -29.354 1 18.79 ? O3P FAD 502 B 1 
#
_model_server_stats.io_time_ms              43 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           53 
#