data_4IVV # _model_server_result.job_id QPOPVGYMxYh3YH65kvistg _model_server_result.datetime_utc '2024-11-01 23:31:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ivv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 4IVV # _exptl.entry_id 4IVV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4IVV _cell.length_a 50.44 _cell.length_b 50.44 _cell.length_c 72.61 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IVV _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 28 A HIS 26 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc2 A ND1 HIS 135 A HIS 133 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc3 A OD2 ASP 151 A ASP 149 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc4 B ZN ZN . A ZN 201 1_555 D O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc5 B ZN ZN . A ZN 201 1_555 D O HOH . A HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc6 B ZN ZN . A ZN 201 1_555 D O HOH . A HOH 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4IVV _atom_sites.fract_transf_matrix[1][1] 0.019826 _atom_sites.fract_transf_matrix[1][2] 0.011446 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022893 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013772 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 201 200 ZN ZN . C 3 EDO A 1 202 1 EDO EDO . D 4 HOH A 1 301 2 HOH HOH . D 4 HOH A 2 302 3 HOH HOH . D 4 HOH A 3 303 4 HOH HOH . D 4 HOH A 4 304 6 HOH HOH . D 4 HOH A 5 305 7 HOH HOH . D 4 HOH A 6 306 8 HOH HOH . D 4 HOH A 7 307 9 HOH HOH . D 4 HOH A 8 308 10 HOH HOH . D 4 HOH A 9 309 11 HOH HOH . D 4 HOH A 10 310 12 HOH HOH . D 4 HOH A 11 311 13 HOH HOH . D 4 HOH A 12 312 14 HOH HOH . D 4 HOH A 13 313 15 HOH HOH . D 4 HOH A 14 314 16 HOH HOH . D 4 HOH A 15 315 17 HOH HOH . D 4 HOH A 16 316 18 HOH HOH . D 4 HOH A 17 317 19 HOH HOH . D 4 HOH A 18 318 20 HOH HOH . D 4 HOH A 19 319 21 HOH HOH . D 4 HOH A 20 320 22 HOH HOH . D 4 HOH A 21 321 23 HOH HOH . D 4 HOH A 22 322 24 HOH HOH . D 4 HOH A 23 323 25 HOH HOH . D 4 HOH A 24 324 26 HOH HOH . D 4 HOH A 25 325 27 HOH HOH . D 4 HOH A 26 326 28 HOH HOH . D 4 HOH A 27 327 29 HOH HOH . D 4 HOH A 28 328 30 HOH HOH . D 4 HOH A 29 329 31 HOH HOH . D 4 HOH A 30 330 32 HOH HOH . D 4 HOH A 31 331 33 HOH HOH . D 4 HOH A 32 332 34 HOH HOH . D 4 HOH A 33 333 35 HOH HOH . D 4 HOH A 34 334 36 HOH HOH . D 4 HOH A 35 335 37 HOH HOH . D 4 HOH A 36 336 38 HOH HOH . D 4 HOH A 37 337 39 HOH HOH . D 4 HOH A 38 338 40 HOH HOH . D 4 HOH A 39 339 41 HOH HOH . D 4 HOH A 40 340 43 HOH HOH . D 4 HOH A 41 341 44 HOH HOH . D 4 HOH A 42 342 45 HOH HOH . D 4 HOH A 43 343 46 HOH HOH . D 4 HOH A 44 344 48 HOH HOH . D 4 HOH A 45 345 49 HOH HOH . D 4 HOH A 46 346 50 HOH HOH . D 4 HOH A 47 347 51 HOH HOH . D 4 HOH A 48 348 52 HOH HOH . D 4 HOH A 49 349 53 HOH HOH . D 4 HOH A 50 350 54 HOH HOH . D 4 HOH A 51 351 55 HOH HOH . D 4 HOH A 52 352 56 HOH HOH . D 4 HOH A 53 353 57 HOH HOH . D 4 HOH A 54 354 58 HOH HOH . D 4 HOH A 55 355 59 HOH HOH . D 4 HOH A 56 356 60 HOH HOH . D 4 HOH A 57 357 61 HOH HOH . D 4 HOH A 58 358 62 HOH HOH . D 4 HOH A 59 359 63 HOH HOH . D 4 HOH A 60 360 64 HOH HOH . D 4 HOH A 61 361 65 HOH HOH . D 4 HOH A 62 362 66 HOH HOH . D 4 HOH A 63 363 67 HOH HOH . D 4 HOH A 64 364 68 HOH HOH . D 4 HOH A 65 365 69 HOH HOH . D 4 HOH A 66 366 70 HOH HOH . D 4 HOH A 67 367 71 HOH HOH . D 4 HOH A 68 368 72 HOH HOH . D 4 HOH A 69 369 74 HOH HOH . D 4 HOH A 70 370 75 HOH HOH . D 4 HOH A 71 371 76 HOH HOH . D 4 HOH A 72 372 77 HOH HOH . D 4 HOH A 73 373 78 HOH HOH . D 4 HOH A 74 374 79 HOH HOH . D 4 HOH A 75 375 80 HOH HOH . D 4 HOH A 76 376 81 HOH HOH . D 4 HOH A 77 377 82 HOH HOH . D 4 HOH A 78 378 83 HOH HOH . D 4 HOH A 79 379 84 HOH HOH . D 4 HOH A 80 380 85 HOH HOH . D 4 HOH A 81 381 86 HOH HOH . D 4 HOH A 82 382 87 HOH HOH . D 4 HOH A 83 383 88 HOH HOH . D 4 HOH A 84 384 89 HOH HOH . D 4 HOH A 85 385 90 HOH HOH . D 4 HOH A 86 386 91 HOH HOH . D 4 HOH A 87 387 92 HOH HOH . D 4 HOH A 88 388 93 HOH HOH . D 4 HOH A 89 389 94 HOH HOH . D 4 HOH A 90 390 95 HOH HOH . D 4 HOH A 91 391 96 HOH HOH . D 4 HOH A 92 392 97 HOH HOH . D 4 HOH A 93 393 98 HOH HOH . D 4 HOH A 94 394 99 HOH HOH . D 4 HOH A 95 395 100 HOH HOH . D 4 HOH A 96 396 101 HOH HOH . D 4 HOH A 97 397 103 HOH HOH . D 4 HOH A 98 398 106 HOH HOH . D 4 HOH A 99 399 107 HOH HOH . D 4 HOH A 100 400 108 HOH HOH . D 4 HOH A 101 401 109 HOH HOH . D 4 HOH A 102 402 110 HOH HOH . D 4 HOH A 103 403 111 HOH HOH . D 4 HOH A 104 404 113 HOH HOH . D 4 HOH A 105 405 114 HOH HOH . D 4 HOH A 106 406 115 HOH HOH . D 4 HOH A 107 407 116 HOH HOH . D 4 HOH A 108 408 117 HOH HOH . D 4 HOH A 109 409 118 HOH HOH . D 4 HOH A 110 410 122 HOH HOH . D 4 HOH A 111 411 125 HOH HOH . D 4 HOH A 112 412 126 HOH HOH . D 4 HOH A 113 413 127 HOH HOH . D 4 HOH A 114 414 129 HOH HOH . D 4 HOH A 115 415 130 HOH HOH . D 4 HOH A 116 416 131 HOH HOH . D 4 HOH A 117 417 134 HOH HOH . D 4 HOH A 118 418 135 HOH HOH . D 4 HOH A 119 419 136 HOH HOH . D 4 HOH A 120 420 138 HOH HOH . D 4 HOH A 121 421 139 HOH HOH . D 4 HOH A 122 422 140 HOH HOH . D 4 HOH A 123 423 141 HOH HOH . D 4 HOH A 124 424 142 HOH HOH . D 4 HOH A 125 425 143 HOH HOH . D 4 HOH A 126 426 144 HOH HOH . D 4 HOH A 127 427 145 HOH HOH . D 4 HOH A 128 428 146 HOH HOH . D 4 HOH A 129 429 147 HOH HOH . D 4 HOH A 130 430 148 HOH HOH . D 4 HOH A 131 431 149 HOH HOH . D 4 HOH A 132 432 150 HOH HOH . D 4 HOH A 133 433 152 HOH HOH . D 4 HOH A 134 434 154 HOH HOH . D 4 HOH A 135 435 157 HOH HOH . D 4 HOH A 136 436 158 HOH HOH . D 4 HOH A 137 437 160 HOH HOH . D 4 HOH A 138 438 161 HOH HOH . D 4 HOH A 139 439 163 HOH HOH . D 4 HOH A 140 440 164 HOH HOH . D 4 HOH A 141 441 165 HOH HOH . D 4 HOH A 142 442 166 HOH HOH . D 4 HOH A 143 443 167 HOH HOH . D 4 HOH A 144 444 168 HOH HOH . D 4 HOH A 145 445 169 HOH HOH . D 4 HOH A 146 446 170 HOH HOH . D 4 HOH A 147 447 171 HOH HOH . D 4 HOH A 148 448 172 HOH HOH . D 4 HOH A 149 449 173 HOH HOH . D 4 HOH A 150 450 174 HOH HOH . D 4 HOH A 151 451 175 HOH HOH . D 4 HOH A 152 452 176 HOH HOH . D 4 HOH A 153 453 1 HOH HOH . D 4 HOH A 154 454 2 HOH HOH . D 4 HOH A 155 455 3 HOH HOH . D 4 HOH A 156 456 2 HOH HOH . D 4 HOH A 157 457 3 HOH HOH . D 4 HOH A 158 458 4 HOH HOH . D 4 HOH A 159 459 5 HOH HOH . D 4 HOH A 160 460 6 HOH HOH . D 4 HOH A 161 461 7 HOH HOH . D 4 HOH A 162 462 8 HOH HOH . D 4 HOH A 163 463 9 HOH HOH . D 4 HOH A 164 464 10 HOH HOH . D 4 HOH A 165 465 11 HOH HOH . D 4 HOH A 166 466 12 HOH HOH . D 4 HOH A 167 467 13 HOH HOH . D 4 HOH A 168 468 14 HOH HOH . D 4 HOH A 169 469 15 HOH HOH . D 4 HOH A 170 470 16 HOH HOH . D 4 HOH A 171 471 17 HOH HOH . D 4 HOH A 172 472 18 HOH HOH . D 4 HOH A 173 473 19 HOH HOH . D 4 HOH A 174 474 20 HOH HOH . D 4 HOH A 175 475 21 HOH HOH . D 4 HOH A 176 476 22 HOH HOH . D 4 HOH A 177 477 23 HOH HOH . D 4 HOH A 178 478 24 HOH HOH . D 4 HOH A 179 479 25 HOH HOH . D 4 HOH A 180 480 26 HOH HOH . D 4 HOH A 181 481 27 HOH HOH . D 4 HOH A 182 482 28 HOH HOH . D 4 HOH A 183 483 29 HOH HOH . D 4 HOH A 184 484 31 HOH HOH . D 4 HOH A 185 485 32 HOH HOH . D 4 HOH A 186 486 33 HOH HOH . D 4 HOH A 187 487 34 HOH HOH . D 4 HOH A 188 488 35 HOH HOH . D 4 HOH A 189 489 36 HOH HOH . D 4 HOH A 190 490 39 HOH HOH . D 4 HOH A 191 491 41 HOH HOH . D 4 HOH A 192 492 44 HOH HOH . D 4 HOH A 193 493 45 HOH HOH . D 4 HOH A 194 494 46 HOH HOH . D 4 HOH A 195 495 47 HOH HOH . D 4 HOH A 196 496 48 HOH HOH . D 4 HOH A 197 497 51 HOH HOH . D 4 HOH A 198 498 52 HOH HOH . D 4 HOH A 199 499 53 HOH HOH . D 4 HOH A 200 500 54 HOH HOH . D 4 HOH A 201 501 55 HOH HOH . D 4 HOH A 202 502 56 HOH HOH . D 4 HOH A 203 503 57 HOH HOH . D 4 HOH A 204 504 58 HOH HOH . D 4 HOH A 205 505 59 HOH HOH . D 4 HOH A 206 506 60 HOH HOH . D 4 HOH A 207 507 61 HOH HOH . D 4 HOH A 208 508 63 HOH HOH . D 4 HOH A 209 509 64 HOH HOH . D 4 HOH A 210 510 65 HOH HOH . D 4 HOH A 211 511 66 HOH HOH . D 4 HOH A 212 512 67 HOH HOH . D 4 HOH A 213 513 68 HOH HOH . D 4 HOH A 214 514 69 HOH HOH . D 4 HOH A 215 515 70 HOH HOH . D 4 HOH A 216 516 71 HOH HOH . D 4 HOH A 217 517 72 HOH HOH . D 4 HOH A 218 518 73 HOH HOH . D 4 HOH A 219 519 74 HOH HOH . D 4 HOH A 220 520 75 HOH HOH . D 4 HOH A 221 521 76 HOH HOH . D 4 HOH A 222 522 77 HOH HOH . D 4 HOH A 223 523 78 HOH HOH . D 4 HOH A 224 524 79 HOH HOH . D 4 HOH A 225 525 80 HOH HOH . D 4 HOH A 226 526 81 HOH HOH . D 4 HOH A 227 527 82 HOH HOH . D 4 HOH A 228 528 83 HOH HOH . D 4 HOH A 229 529 84 HOH HOH . D 4 HOH A 230 530 85 HOH HOH . D 4 HOH A 231 531 86 HOH HOH . D 4 HOH A 232 532 87 HOH HOH . D 4 HOH A 233 533 88 HOH HOH . D 4 HOH A 234 534 89 HOH HOH . D 4 HOH A 235 535 90 HOH HOH . D 4 HOH A 236 536 91 HOH HOH . D 4 HOH A 237 537 92 HOH HOH . D 4 HOH A 238 538 93 HOH HOH . D 4 HOH A 239 539 94 HOH HOH . D 4 HOH A 240 540 95 HOH HOH . D 4 HOH A 241 541 96 HOH HOH . D 4 HOH A 242 542 97 HOH HOH . D 4 HOH A 243 543 98 HOH HOH . D 4 HOH A 244 544 100 HOH HOH . D 4 HOH A 245 545 101 HOH HOH . D 4 HOH A 246 546 102 HOH HOH . D 4 HOH A 247 547 103 HOH HOH . D 4 HOH A 248 548 104 HOH HOH . D 4 HOH A 249 549 105 HOH HOH . D 4 HOH A 250 550 106 HOH HOH . D 4 HOH A 251 551 107 HOH HOH . D 4 HOH A 252 552 108 HOH HOH . D 4 HOH A 253 553 109 HOH HOH . D 4 HOH A 254 554 110 HOH HOH . D 4 HOH A 255 555 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 36.784 26.515 12.417 1 18.76 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . C 3 37.267 25.163 12.467 1 22.33 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . C 3 37.943 27.493 12.172 1 13.35 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . C 3 37.455 28.817 11.971 1 15.31 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 4 #