data_4IWX # _model_server_result.job_id TVPKbtFYTfpeIuX4OwLvKA _model_server_result.datetime_utc '2024-11-27 15:31:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4iwx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 4IWX # _exptl.entry_id 4IWX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 147.129 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLUTAMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4IWX _cell.length_a 129.802 _cell.length_b 129.802 _cell.length_c 171.239 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IWX _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 -64.901 112.411829 0 3 'crystal symmetry operation' 9_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 114.159333 4 'crystal symmetry operation' 12_565 x,x-y+1,-z+2/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -64.901 112.411829 114.159333 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H9 N O4' _chem_comp.formula_weight 147.129 _chem_comp.id GLU _chem_comp.mon_nstd_flag y _chem_comp.name 'GLUTAMIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLU sing 146 n n N H GLU sing 147 n n N H2 GLU sing 148 n n CA C GLU sing 149 n n CA CB GLU sing 150 n n CA HA GLU sing 151 n n C O GLU doub 152 n n C OXT GLU sing 153 n n CB CG GLU sing 154 n n CB HB2 GLU sing 155 n n CB HB3 GLU sing 156 n n CG CD GLU sing 157 n n CG HG2 GLU sing 158 n n CG HG3 GLU sing 159 n n CD OE1 GLU doub 160 n n CD OE2 GLU sing 161 n n OE2 HE2 GLU sing 162 n n OXT HXT GLU sing 163 n n # _atom_sites.entry_id 4IWX _atom_sites.fract_transf_matrix[1][1] 0.007704 _atom_sites.fract_transf_matrix[1][2] 0.004448 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008896 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00584 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 401 320 ADP ADP . C 3 GLU A 1 402 321 GLU GLU . D 4 SO4 A 1 403 1 SO4 SO4 . E 4 SO4 A 1 404 2 SO4 SO4 . F 4 SO4 A 1 405 3 SO4 SO4 . G 4 SO4 A 1 406 4 SO4 SO4 . H 4 SO4 A 1 407 5 SO4 SO4 . I 5 HOH A 1 501 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLU . . . C 3 -5.035 60.433 55.681 1 96.35 ? N GLU 402 A 1 HETATM 2 C CA GLU . . . C 3 -4.268 61.547 55.124 1 99.36 ? CA GLU 402 A 1 HETATM 3 C C GLU . . . C 3 -2.765 61.283 54.983 1 101.87 ? C GLU 402 A 1 HETATM 4 O O GLU . . . C 3 -2.327 60.224 54.521 1 102.38 ? O GLU 402 A 1 HETATM 5 C CB GLU . . . C 3 -4.484 62.815 55.948 1 87.69 ? CB GLU 402 A 1 HETATM 6 C CG GLU . . . C 3 -5.861 63.371 55.868 1 64.35 ? CG GLU 402 A 1 HETATM 7 C CD GLU . . . C 3 -5.881 64.817 56.223 1 58.44 ? CD GLU 402 A 1 HETATM 8 O OE1 GLU . . . C 3 -4.795 65.405 56.334 1 60.31 ? OE1 GLU 402 A 1 HETATM 9 O OE2 GLU . . . C 3 -6.971 65.373 56.397 1 62.39 ? OE2 GLU 402 A 1 HETATM 10 O OXT GLU . . . C 3 -1.958 62.156 55.321 1 100.02 ? OXT GLU 402 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #