data_4IXE # _model_server_result.job_id B6o4Jruvgt0G3g9_DMeSRQ _model_server_result.datetime_utc '2024-11-28 03:29:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ixe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4IXE # _exptl.entry_id 4IXE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 320.273 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~6~-methyl-N~6~-(3,4,5-trifluorophenyl)pyrido[2,3-d]pyrimidine-2,4,6-triamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.59 _cell.angle_gamma 90 _cell.entry_id 4IXE _cell.length_a 36.708 _cell.length_b 42.719 _cell.length_c 58.481 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IXE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H11 F3 N6' _chem_comp.formula_weight 320.273 _chem_comp.id IXE _chem_comp.mon_nstd_flag . _chem_comp.name N~6~-methyl-N~6~-(3,4,5-trifluorophenyl)pyrido[2,3-d]pyrimidine-2,4,6-triamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F2 C12 IXE sing 173 n n F3 C13 IXE sing 174 n n C13 C12 IXE doub 175 n y C13 C14 IXE sing 176 n y C12 C11 IXE sing 177 n y F1 C11 IXE sing 178 n n C11 C10 IXE doub 179 n y C14 C9 IXE doub 180 n y N2 C6 IXE doub 181 n y N2 C5 IXE sing 182 n y C6 C2 IXE sing 183 n y C9 C10 IXE sing 184 n y C9 N1 IXE sing 185 n n N3 C5 IXE doub 186 n y N3 C7 IXE sing 187 n y C5 C4 IXE sing 188 n y N4 C7 IXE sing 189 n n C2 N1 IXE sing 190 n n C2 C3 IXE doub 191 n y N1 C1 IXE sing 192 n n C7 N5 IXE doub 193 n y C4 C3 IXE sing 194 n y C4 C8 IXE doub 195 n y N5 C8 IXE sing 196 n y C8 N6 IXE sing 197 n n C3 H1 IXE sing 198 n n N6 H2 IXE sing 199 n n N6 H3 IXE sing 200 n n N4 H4 IXE sing 201 n n N4 H5 IXE sing 202 n n C6 H6 IXE sing 203 n n C1 H7 IXE sing 204 n n C1 H8 IXE sing 205 n n C1 H9 IXE sing 206 n n C10 H10 IXE sing 207 n n C14 H11 IXE sing 208 n n # _atom_sites.entry_id 4IXE _atom_sites.fract_transf_matrix[1][1] 0.027242 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001709 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023409 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017133 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IXE D 1 301 1 IXE IXE . C 3 NDP D 1 302 1 NDP NDP . D 4 HOH D 1 401 1 HOH HOH . D 4 HOH D 2 402 2 HOH HOH . D 4 HOH D 3 403 3 HOH HOH . D 4 HOH D 4 404 4 HOH HOH . D 4 HOH D 5 405 5 HOH HOH . D 4 HOH D 6 406 6 HOH HOH . D 4 HOH D 7 407 7 HOH HOH . D 4 HOH D 8 408 8 HOH HOH . D 4 HOH D 9 409 9 HOH HOH . D 4 HOH D 10 410 10 HOH HOH . D 4 HOH D 11 411 11 HOH HOH . D 4 HOH D 12 412 12 HOH HOH . D 4 HOH D 13 413 13 HOH HOH . D 4 HOH D 14 414 14 HOH HOH . D 4 HOH D 15 415 15 HOH HOH . D 4 HOH D 16 416 16 HOH HOH . D 4 HOH D 17 417 17 HOH HOH . D 4 HOH D 18 418 18 HOH HOH . D 4 HOH D 19 419 19 HOH HOH . D 4 HOH D 20 420 20 HOH HOH . D 4 HOH D 21 421 21 HOH HOH . D 4 HOH D 22 422 22 HOH HOH . D 4 HOH D 23 423 23 HOH HOH . D 4 HOH D 24 424 24 HOH HOH . D 4 HOH D 25 425 25 HOH HOH . D 4 HOH D 26 426 26 HOH HOH . D 4 HOH D 27 427 27 HOH HOH . D 4 HOH D 28 428 28 HOH HOH . D 4 HOH D 29 429 29 HOH HOH . D 4 HOH D 30 430 30 HOH HOH . D 4 HOH D 31 431 31 HOH HOH . D 4 HOH D 32 432 32 HOH HOH . D 4 HOH D 33 433 33 HOH HOH . D 4 HOH D 34 434 34 HOH HOH . D 4 HOH D 35 435 35 HOH HOH . D 4 HOH D 36 436 36 HOH HOH . D 4 HOH D 37 437 37 HOH HOH . D 4 HOH D 38 438 38 HOH HOH . D 4 HOH D 39 439 39 HOH HOH . D 4 HOH D 40 440 40 HOH HOH . D 4 HOH D 41 441 41 HOH HOH . D 4 HOH D 42 442 42 HOH HOH . D 4 HOH D 43 443 43 HOH HOH . D 4 HOH D 44 444 44 HOH HOH . D 4 HOH D 45 445 45 HOH HOH . D 4 HOH D 46 446 46 HOH HOH . D 4 HOH D 47 447 47 HOH HOH . D 4 HOH D 48 448 48 HOH HOH . D 4 HOH D 49 449 49 HOH HOH . D 4 HOH D 50 450 50 HOH HOH . D 4 HOH D 51 451 51 HOH HOH . D 4 HOH D 52 452 52 HOH HOH . D 4 HOH D 53 453 53 HOH HOH . D 4 HOH D 54 454 54 HOH HOH . D 4 HOH D 55 455 55 HOH HOH . D 4 HOH D 56 456 56 HOH HOH . D 4 HOH D 57 457 57 HOH HOH . D 4 HOH D 58 458 58 HOH HOH . D 4 HOH D 59 459 59 HOH HOH . D 4 HOH D 60 460 61 HOH HOH . D 4 HOH D 61 461 62 HOH HOH . D 4 HOH D 62 462 63 HOH HOH . D 4 HOH D 63 463 64 HOH HOH . D 4 HOH D 64 464 65 HOH HOH . D 4 HOH D 65 465 66 HOH HOH . D 4 HOH D 66 466 67 HOH HOH . D 4 HOH D 67 467 68 HOH HOH . D 4 HOH D 68 468 69 HOH HOH . D 4 HOH D 69 469 71 HOH HOH . D 4 HOH D 70 470 72 HOH HOH . D 4 HOH D 71 471 74 HOH HOH . D 4 HOH D 72 472 75 HOH HOH . D 4 HOH D 73 473 76 HOH HOH . D 4 HOH D 74 474 77 HOH HOH . D 4 HOH D 75 475 79 HOH HOH . D 4 HOH D 76 476 80 HOH HOH . D 4 HOH D 77 477 81 HOH HOH . D 4 HOH D 78 478 82 HOH HOH . D 4 HOH D 79 479 83 HOH HOH . D 4 HOH D 80 480 84 HOH HOH . D 4 HOH D 81 481 85 HOH HOH . D 4 HOH D 82 482 86 HOH HOH . D 4 HOH D 83 483 87 HOH HOH . D 4 HOH D 84 484 88 HOH HOH . D 4 HOH D 85 485 89 HOH HOH . D 4 HOH D 86 486 90 HOH HOH . D 4 HOH D 87 487 91 HOH HOH . D 4 HOH D 88 488 92 HOH HOH . D 4 HOH D 89 489 93 HOH HOH . D 4 HOH D 90 490 94 HOH HOH . D 4 HOH D 91 491 95 HOH HOH . D 4 HOH D 92 492 96 HOH HOH . D 4 HOH D 93 493 97 HOH HOH . D 4 HOH D 94 494 98 HOH HOH . D 4 HOH D 95 495 99 HOH HOH . D 4 HOH D 96 496 100 HOH HOH . D 4 HOH D 97 497 101 HOH HOH . D 4 HOH D 98 498 102 HOH HOH . D 4 HOH D 99 499 103 HOH HOH . D 4 HOH D 100 500 104 HOH HOH . D 4 HOH D 101 501 105 HOH HOH . D 4 HOH D 102 502 106 HOH HOH . D 4 HOH D 103 503 107 HOH HOH . D 4 HOH D 104 504 108 HOH HOH . D 4 HOH D 105 505 109 HOH HOH . D 4 HOH D 106 506 110 HOH HOH . D 4 HOH D 107 507 111 HOH HOH . D 4 HOH D 108 508 112 HOH HOH . D 4 HOH D 109 509 113 HOH HOH . D 4 HOH D 110 510 114 HOH HOH . D 4 HOH D 111 511 115 HOH HOH . D 4 HOH D 112 512 116 HOH HOH . D 4 HOH D 113 513 117 HOH HOH . D 4 HOH D 114 514 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 IXE . . . B 2 13.135 0.775 12.077 1 10.36 ? C3 IXE 301 D 1 HETATM 2 C C4 IXE . . . B 2 12.357 -0.369 11.869 1 9 ? C4 IXE 301 D 1 HETATM 3 C C8 IXE . . . B 2 11.242 -0.776 12.705 1 8.07 ? C8 IXE 301 D 1 HETATM 4 N N6 IXE . . . B 2 10.872 -0.063 13.772 1 8.24 ? N6 IXE 301 D 1 HETATM 5 N N5 IXE . . . B 2 10.515 -1.853 12.42 1 7.82 ? N5 IXE 301 D 1 HETATM 6 C C7 IXE . . . B 2 10.767 -2.608 11.324 1 7.81 ? C7 IXE 301 D 1 HETATM 7 N N4 IXE . . . B 2 10.034 -3.687 11.029 1 7.78 ? N4 IXE 301 D 1 HETATM 8 N N3 IXE . . . B 2 11.765 -2.267 10.461 1 8.76 ? N3 IXE 301 D 1 HETATM 9 C C5 IXE . . . B 2 12.601 -1.194 10.724 1 9.57 ? C5 IXE 301 D 1 HETATM 10 N N2 IXE . . . B 2 13.582 -0.908 9.827 1 10.67 ? N2 IXE 301 D 1 HETATM 11 C C6 IXE . . . B 2 14.359 0.184 10.067 1 12.26 ? C6 IXE 301 D 1 HETATM 12 C C2 IXE . . . B 2 14.189 1.032 11.137 1 12.11 ? C2 IXE 301 D 1 HETATM 13 N N1 IXE . . . B 2 14.995 2.128 11.26 1 13.75 ? N1 IXE 301 D 1 HETATM 14 C C1 IXE . . . B 2 15.29 2.691 12.592 1 18.58 ? C1 IXE 301 D 1 HETATM 15 C C9 IXE . . . B 2 15.478 2.817 10.179 1 16.77 ? C9 IXE 301 D 1 HETATM 16 C C10 IXE . . . B 2 16.829 3.244 10.2 1 20.28 ? C10 IXE 301 D 1 HETATM 17 C C11 IXE . . . B 2 17.175 3.962 9.052 1 23.29 ? C11 IXE 301 D 1 HETATM 18 F F1 IXE . . . B 2 18.54 4.498 8.873 1 28.7 ? F1 IXE 301 D 1 HETATM 19 C C12 IXE . . . B 2 16.281 4.257 8.005 1 20.83 ? C12 IXE 301 D 1 HETATM 20 F F2 IXE . . . B 2 16.678 5.063 6.822 1 23.76 ? F2 IXE 301 D 1 HETATM 21 C C13 IXE . . . B 2 15.013 3.831 8.005 1 20.88 ? C13 IXE 301 D 1 HETATM 22 F F3 IXE . . . B 2 14.131 4.111 6.939 1 23.82 ? F3 IXE 301 D 1 HETATM 23 C C14 IXE . . . B 2 14.608 3.142 9.134 1 16.92 ? C14 IXE 301 D 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #