data_4IXF
#
_model_server_result.job_id            '_ET2irBTaNpmgMRhQ1PQRA' 
_model_server_result.datetime_utc      '2024-11-28 19:12:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ixf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    4IXF 
#
_exptl.entry_id    4IXF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.46 
_cell.angle_gamma         90 
_cell.entry_id            4IXF 
_cell.length_a            37.365 
_cell.length_b            42.749 
_cell.length_c            60.918 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4IXF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 282 n n 
PA O2A NDP sing 283 n n 
PA O5B NDP sing 284 n n 
PA O3 NDP sing 285 n n 
O2A HOA2 NDP sing 286 n n 
O5B C5B NDP sing 287 n n 
C5B C4B NDP sing 288 n n 
C5B H51A NDP sing 289 n n 
C5B H52A NDP sing 290 n n 
C4B O4B NDP sing 291 n n 
C4B C3B NDP sing 292 n n 
C4B H4B NDP sing 293 n n 
O4B C1B NDP sing 294 n n 
C3B O3B NDP sing 295 n n 
C3B C2B NDP sing 296 n n 
C3B H3B NDP sing 297 n n 
O3B HO3A NDP sing 298 n n 
C2B O2B NDP sing 299 n n 
C2B C1B NDP sing 300 n n 
C2B H2B NDP sing 301 n n 
O2B P2B NDP sing 302 n n 
C1B N9A NDP sing 303 n n 
C1B H1B NDP sing 304 n n 
N9A C8A NDP sing 305 n y 
N9A C4A NDP sing 306 n y 
C8A N7A NDP doub 307 n y 
C8A H8A NDP sing 308 n n 
N7A C5A NDP sing 309 n y 
C5A C6A NDP sing 310 n y 
C5A C4A NDP doub 311 n y 
C6A N6A NDP sing 312 n n 
C6A N1A NDP doub 313 n y 
N6A H61A NDP sing 314 n n 
N6A H62A NDP sing 315 n n 
N1A C2A NDP sing 316 n y 
C2A N3A NDP doub 317 n y 
C2A H2A NDP sing 318 n n 
N3A C4A NDP sing 319 n y 
O3 PN NDP sing 320 n n 
PN O1N NDP doub 321 n n 
PN O2N NDP sing 322 n n 
PN O5D NDP sing 323 n n 
O2N H21N NDP sing 324 n n 
O5D C5D NDP sing 325 n n 
C5D C4D NDP sing 326 n n 
C5D H51N NDP sing 327 n n 
C5D H52N NDP sing 328 n n 
C4D O4D NDP sing 329 n n 
C4D C3D NDP sing 330 n n 
C4D H4D NDP sing 331 n n 
O4D C1D NDP sing 332 n n 
C3D O3D NDP sing 333 n n 
C3D C2D NDP sing 334 n n 
C3D H3D NDP sing 335 n n 
O3D HO3N NDP sing 336 n n 
C2D O2D NDP sing 337 n n 
C2D C1D NDP sing 338 n n 
C2D H2D NDP sing 339 n n 
O2D HO2N NDP sing 340 n n 
C1D N1N NDP sing 341 n n 
C1D H1D NDP sing 342 n n 
N1N C2N NDP sing 343 n n 
N1N C6N NDP sing 344 n n 
C2N C3N NDP doub 345 n n 
C2N H2N NDP sing 346 n n 
C3N C7N NDP sing 347 n n 
C3N C4N NDP sing 348 n n 
C7N O7N NDP doub 349 n n 
C7N N7N NDP sing 350 n n 
N7N H71N NDP sing 351 n n 
N7N H72N NDP sing 352 n n 
C4N C5N NDP sing 353 n n 
C4N H41N NDP sing 354 n n 
C4N H42N NDP sing 355 n n 
C5N C6N NDP doub 356 n n 
C5N H5N NDP sing 357 n n 
C6N H6N NDP sing 358 n n 
P2B O1X NDP doub 359 n n 
P2B O2X NDP sing 360 n n 
P2B O3X NDP sing 361 n n 
O2X HOP2 NDP sing 362 n n 
O3X HOP3 NDP sing 363 n n 
#
_atom_sites.entry_id                     4IXF 
_atom_sites.fract_transf_matrix[1][1]    0.026763 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002558 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023392 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01649 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NDP X 1 301 1 NDP NDP . 
C 3 IXF X 1 302 1 IXF IXF . 
D 4 HOH X 1 401 1 HOH HOH . 
D 4 HOH X 2 402 2 HOH HOH . 
D 4 HOH X 3 403 3 HOH HOH . 
D 4 HOH X 4 404 4 HOH HOH . 
D 4 HOH X 5 405 5 HOH HOH . 
D 4 HOH X 6 406 6 HOH HOH . 
D 4 HOH X 7 407 7 HOH HOH . 
D 4 HOH X 8 408 8 HOH HOH . 
D 4 HOH X 9 409 9 HOH HOH . 
D 4 HOH X 10 410 10 HOH HOH . 
D 4 HOH X 11 411 11 HOH HOH . 
D 4 HOH X 12 412 12 HOH HOH . 
D 4 HOH X 13 413 13 HOH HOH . 
D 4 HOH X 14 414 14 HOH HOH . 
D 4 HOH X 15 415 15 HOH HOH . 
D 4 HOH X 16 416 16 HOH HOH . 
D 4 HOH X 17 417 17 HOH HOH . 
D 4 HOH X 18 418 18 HOH HOH . 
D 4 HOH X 19 419 19 HOH HOH . 
D 4 HOH X 20 420 20 HOH HOH . 
D 4 HOH X 21 421 21 HOH HOH . 
D 4 HOH X 22 422 22 HOH HOH . 
D 4 HOH X 23 423 23 HOH HOH . 
D 4 HOH X 24 424 24 HOH HOH . 
D 4 HOH X 25 425 25 HOH HOH . 
D 4 HOH X 26 426 26 HOH HOH . 
D 4 HOH X 27 427 27 HOH HOH . 
D 4 HOH X 28 428 28 HOH HOH . 
D 4 HOH X 29 429 29 HOH HOH . 
D 4 HOH X 30 430 30 HOH HOH . 
D 4 HOH X 31 431 31 HOH HOH . 
D 4 HOH X 32 432 32 HOH HOH . 
D 4 HOH X 33 433 33 HOH HOH . 
D 4 HOH X 34 434 34 HOH HOH . 
D 4 HOH X 35 435 35 HOH HOH . 
D 4 HOH X 36 436 36 HOH HOH . 
D 4 HOH X 37 437 37 HOH HOH . 
D 4 HOH X 38 438 38 HOH HOH . 
D 4 HOH X 39 439 39 HOH HOH . 
D 4 HOH X 40 440 40 HOH HOH . 
D 4 HOH X 41 441 41 HOH HOH . 
D 4 HOH X 42 442 42 HOH HOH . 
D 4 HOH X 43 443 43 HOH HOH . 
D 4 HOH X 44 444 44 HOH HOH . 
D 4 HOH X 45 445 45 HOH HOH . 
D 4 HOH X 46 446 46 HOH HOH . 
D 4 HOH X 47 447 47 HOH HOH . 
D 4 HOH X 48 448 48 HOH HOH . 
D 4 HOH X 49 449 49 HOH HOH . 
D 4 HOH X 50 450 50 HOH HOH . 
D 4 HOH X 51 451 51 HOH HOH . 
D 4 HOH X 52 452 52 HOH HOH . 
D 4 HOH X 53 453 53 HOH HOH . 
D 4 HOH X 54 454 54 HOH HOH . 
D 4 HOH X 55 455 55 HOH HOH . 
D 4 HOH X 56 456 56 HOH HOH . 
D 4 HOH X 57 457 57 HOH HOH . 
D 4 HOH X 58 458 58 HOH HOH . 
D 4 HOH X 59 459 59 HOH HOH . 
D 4 HOH X 60 460 60 HOH HOH . 
D 4 HOH X 61 461 61 HOH HOH . 
D 4 HOH X 62 462 62 HOH HOH . 
D 4 HOH X 63 463 63 HOH HOH . 
D 4 HOH X 64 464 64 HOH HOH . 
D 4 HOH X 65 465 65 HOH HOH . 
D 4 HOH X 66 466 66 HOH HOH . 
D 4 HOH X 67 467 67 HOH HOH . 
D 4 HOH X 68 468 68 HOH HOH . 
D 4 HOH X 69 469 69 HOH HOH . 
D 4 HOH X 70 470 70 HOH HOH . 
D 4 HOH X 71 471 71 HOH HOH . 
D 4 HOH X 72 472 72 HOH HOH . 
D 4 HOH X 73 473 73 HOH HOH . 
D 4 HOH X 74 474 74 HOH HOH . 
D 4 HOH X 75 475 75 HOH HOH . 
D 4 HOH X 76 476 76 HOH HOH . 
D 4 HOH X 77 477 77 HOH HOH . 
D 4 HOH X 78 478 78 HOH HOH . 
D 4 HOH X 79 479 79 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . B 2 -3.172 4.04 23.484 1 25.05 ? PA NDP 301 X 1 
HETATM 2 O O1A NDP . . . B 2 -4.34 3.499 24.281 1 26.14 ? O1A NDP 301 X 1 
HETATM 3 O O2A NDP . . . B 2 -3.209 4.459 22.094 1 23.78 ? O2A NDP 301 X 1 
HETATM 4 O O5B NDP . . . B 2 -2.506 5.399 24.218 1 26.21 ? O5B NDP 301 X 1 
HETATM 5 C C5B NDP . . . B 2 -2.572 5.433 25.659 1 25.7 ? C5B NDP 301 X 1 
HETATM 6 C C4B NDP . . . B 2 -2.483 6.873 26.031 1 24.23 ? C4B NDP 301 X 1 
HETATM 7 O O4B NDP . . . B 2 -3.662 7.577 25.495 1 24.58 ? O4B NDP 301 X 1 
HETATM 8 C C3B NDP . . . B 2 -2.438 7.07 27.57 1 26.15 ? C3B NDP 301 X 1 
HETATM 9 O O3B NDP . . . B 2 -1.052 7.229 27.974 1 26.66 ? O3B NDP 301 X 1 
HETATM 10 C C2B NDP . . . B 2 -3.171 8.386 27.656 1 26.3 ? C2B NDP 301 X 1 
HETATM 11 O O2B NDP . . . B 2 -2.477 9.454 27.087 1 25 ? O2B NDP 301 X 1 
HETATM 12 C C1B NDP . . . B 2 -4.333 8.204 26.644 1 23.48 ? C1B NDP 301 X 1 
HETATM 13 N N9A NDP . . . B 2 -5.492 7.452 27.107 1 26.24 ? N9A NDP 301 X 1 
HETATM 14 C C8A NDP . . . B 2 -5.867 6.2 26.774 1 24.01 ? C8A NDP 301 X 1 
HETATM 15 N N7A NDP . . . B 2 -6.977 5.854 27.401 1 24.59 ? N7A NDP 301 X 1 
HETATM 16 C C5A NDP . . . B 2 -7.367 6.954 28.113 1 27.17 ? C5A NDP 301 X 1 
HETATM 17 C C6A NDP . . . B 2 -8.454 7.244 28.941 1 29.22 ? C6A NDP 301 X 1 
HETATM 18 N N6A NDP . . . B 2 -9.445 6.365 29.184 1 31.5 ? N6A NDP 301 X 1 
HETATM 19 N N1A NDP . . . B 2 -8.486 8.461 29.512 1 28.75 ? N1A NDP 301 X 1 
HETATM 20 C C2A NDP . . . B 2 -7.554 9.405 29.323 1 27.48 ? C2A NDP 301 X 1 
HETATM 21 N N3A NDP . . . B 2 -6.499 9.166 28.543 1 29.41 ? N3A NDP 301 X 1 
HETATM 22 C C4A NDP . . . B 2 -6.398 7.952 27.953 1 25.64 ? C4A NDP 301 X 1 
HETATM 23 O O3 NDP . . . B 2 -1.877 3.156 23.747 1 25.23 ? O3 NDP 301 X 1 
HETATM 24 P PN NDP . . . B 2 -1.571 1.71 24.03 1 26.49 ? PN NDP 301 X 1 
HETATM 25 O O1N NDP . . . B 2 -2.489 1.03 24.997 1 28.76 ? O1N NDP 301 X 1 
HETATM 26 O O2N NDP . . . B 2 -0.064 1.588 24.341 1 28.25 ? O2N NDP 301 X 1 
HETATM 27 O O5D NDP . . . B 2 -1.709 0.983 22.687 1 25.55 ? O5D NDP 301 X 1 
HETATM 28 C C5D NDP . . . B 2 -1.015 1.448 21.454 1 25.92 ? C5D NDP 301 X 1 
HETATM 29 C C4D NDP . . . B 2 -0.461 0.212 20.731 1 25.83 ? C4D NDP 301 X 1 
HETATM 30 O O4D NDP . . . B 2 -1.7 -0.342 20.195 1 25.74 ? O4D NDP 301 X 1 
HETATM 31 C C3D NDP . . . B 2 0.456 0.401 19.51 1 23.96 ? C3D NDP 301 X 1 
HETATM 32 O O3D NDP . . . B 2 1.219 -0.805 19.306 1 25.29 ? O3D NDP 301 X 1 
HETATM 33 C C2D NDP . . . B 2 -0.506 0.471 18.357 1 23.43 ? C2D NDP 301 X 1 
HETATM 34 O O2D NDP . . . B 2 0.097 0.047 17.118 1 24.24 ? O2D NDP 301 X 1 
HETATM 35 C C1D NDP . . . B 2 -1.527 -0.584 18.754 1 24.84 ? C1D NDP 301 X 1 
HETATM 36 N N1N NDP . . . B 2 -2.867 -0.472 18.073 1 23.62 ? N1N NDP 301 X 1 
HETATM 37 C C2N NDP . . . B 2 -3.349 -1.674 17.484 1 20.41 ? C2N NDP 301 X 1 
HETATM 38 C C3N NDP . . . B 2 -4.596 -1.689 16.892 1 20.65 ? C3N NDP 301 X 1 
HETATM 39 C C7N NDP . . . B 2 -5.076 -2.999 16.172 1 20.83 ? C7N NDP 301 X 1 
HETATM 40 O O7N NDP . . . B 2 -4.341 -4.021 15.994 1 19.79 ? O7N NDP 301 X 1 
HETATM 41 N N7N NDP . . . B 2 -6.335 -2.913 15.813 1 17.52 ? N7N NDP 301 X 1 
HETATM 42 C C4N NDP . . . B 2 -5.32 -0.472 16.8 1 22.38 ? C4N NDP 301 X 1 
HETATM 43 C C5N NDP . . . B 2 -4.835 0.691 17.425 1 25.4 ? C5N NDP 301 X 1 
HETATM 44 C C6N NDP . . . B 2 -3.601 0.705 18.067 1 22.96 ? C6N NDP 301 X 1 
HETATM 45 P P2B NDP . . . B 2 -1.425 10.521 27.923 1 26.77 ? P2B NDP 301 X 1 
HETATM 46 O O1X NDP . . . B 2 -0.287 9.573 28.334 1 26.48 ? O1X NDP 301 X 1 
HETATM 47 O O2X NDP . . . B 2 -1.097 11.556 26.895 1 25.7 ? O2X NDP 301 X 1 
HETATM 48 O O3X NDP . . . B 2 -2.242 10.981 29.266 1 26.09 ? O3X NDP 301 X 1 
#
_model_server_stats.io_time_ms              56 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           48 
#