data_4IXF # _model_server_result.job_id qNV19GxwTjZq7hL0L3ntmA _model_server_result.datetime_utc '2024-11-25 02:39:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ixf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 4IXF # _exptl.entry_id 4IXF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 308.381 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~6~-methyl-N~6~-[4-(propan-2-yl)phenyl]pyrido[2,3-d]pyrimidine-2,4,6-triamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.46 _cell.angle_gamma 90 _cell.entry_id 4IXF _cell.length_a 37.365 _cell.length_b 42.749 _cell.length_c 60.918 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IXF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H20 N6' _chem_comp.formula_weight 308.381 _chem_comp.id IXF _chem_comp.mon_nstd_flag . _chem_comp.name N~6~-methyl-N~6~-[4-(propan-2-yl)phenyl]pyrido[2,3-d]pyrimidine-2,4,6-triamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAB CAV IXF sing 173 n n CAA CAV IXF sing 174 n n CAV CAQ IXF sing 175 n n CAQ CAF IXF doub 176 n y CAQ CAG IXF sing 177 n y CAF CAH IXF sing 178 n y CAG CAI IXF doub 179 n y CAH CAR IXF doub 180 n y NAL CAJ IXF doub 181 n y NAL C4 IXF sing 182 n y CAI CAR IXF sing 183 n y CAJ CAS IXF sing 184 n y CAR NAW IXF sing 185 n n N3 C4 IXF doub 186 n y N3 C2 IXF sing 187 n y C4 C5 IXF sing 188 n y NAD C2 IXF sing 189 n n C2 N1 IXF doub 190 n y CAS NAW IXF sing 191 n n CAS CAK IXF doub 192 n y NAW CAC IXF sing 193 n n C5 CAK IXF sing 194 n y C5 C6 IXF doub 195 n y N1 C6 IXF sing 196 n y C6 NAE IXF sing 197 n n CAA H1 IXF sing 198 n n CAA H2 IXF sing 199 n n CAA H3 IXF sing 200 n n CAV H4 IXF sing 201 n n CAB H5 IXF sing 202 n n CAB H6 IXF sing 203 n n CAB H7 IXF sing 204 n n CAG H8 IXF sing 205 n n CAI H9 IXF sing 206 n n CAF H10 IXF sing 207 n n CAH H11 IXF sing 208 n n CAC H12 IXF sing 209 n n CAC H13 IXF sing 210 n n CAC H14 IXF sing 211 n n CAK H15 IXF sing 212 n n NAE H16 IXF sing 213 n n NAE H17 IXF sing 214 n n NAD H18 IXF sing 215 n n NAD H19 IXF sing 216 n n CAJ H20 IXF sing 217 n n # _atom_sites.entry_id 4IXF _atom_sites.fract_transf_matrix[1][1] 0.026763 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002558 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023392 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01649 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP X 1 301 1 NDP NDP . C 3 IXF X 1 302 1 IXF IXF . D 4 HOH X 1 401 1 HOH HOH . D 4 HOH X 2 402 2 HOH HOH . D 4 HOH X 3 403 3 HOH HOH . D 4 HOH X 4 404 4 HOH HOH . D 4 HOH X 5 405 5 HOH HOH . D 4 HOH X 6 406 6 HOH HOH . D 4 HOH X 7 407 7 HOH HOH . D 4 HOH X 8 408 8 HOH HOH . D 4 HOH X 9 409 9 HOH HOH . D 4 HOH X 10 410 10 HOH HOH . D 4 HOH X 11 411 11 HOH HOH . D 4 HOH X 12 412 12 HOH HOH . D 4 HOH X 13 413 13 HOH HOH . D 4 HOH X 14 414 14 HOH HOH . D 4 HOH X 15 415 15 HOH HOH . D 4 HOH X 16 416 16 HOH HOH . D 4 HOH X 17 417 17 HOH HOH . D 4 HOH X 18 418 18 HOH HOH . D 4 HOH X 19 419 19 HOH HOH . D 4 HOH X 20 420 20 HOH HOH . D 4 HOH X 21 421 21 HOH HOH . D 4 HOH X 22 422 22 HOH HOH . D 4 HOH X 23 423 23 HOH HOH . D 4 HOH X 24 424 24 HOH HOH . D 4 HOH X 25 425 25 HOH HOH . D 4 HOH X 26 426 26 HOH HOH . D 4 HOH X 27 427 27 HOH HOH . D 4 HOH X 28 428 28 HOH HOH . D 4 HOH X 29 429 29 HOH HOH . D 4 HOH X 30 430 30 HOH HOH . D 4 HOH X 31 431 31 HOH HOH . D 4 HOH X 32 432 32 HOH HOH . D 4 HOH X 33 433 33 HOH HOH . D 4 HOH X 34 434 34 HOH HOH . D 4 HOH X 35 435 35 HOH HOH . D 4 HOH X 36 436 36 HOH HOH . D 4 HOH X 37 437 37 HOH HOH . D 4 HOH X 38 438 38 HOH HOH . D 4 HOH X 39 439 39 HOH HOH . D 4 HOH X 40 440 40 HOH HOH . D 4 HOH X 41 441 41 HOH HOH . D 4 HOH X 42 442 42 HOH HOH . D 4 HOH X 43 443 43 HOH HOH . D 4 HOH X 44 444 44 HOH HOH . D 4 HOH X 45 445 45 HOH HOH . D 4 HOH X 46 446 46 HOH HOH . D 4 HOH X 47 447 47 HOH HOH . D 4 HOH X 48 448 48 HOH HOH . D 4 HOH X 49 449 49 HOH HOH . D 4 HOH X 50 450 50 HOH HOH . D 4 HOH X 51 451 51 HOH HOH . D 4 HOH X 52 452 52 HOH HOH . D 4 HOH X 53 453 53 HOH HOH . D 4 HOH X 54 454 54 HOH HOH . D 4 HOH X 55 455 55 HOH HOH . D 4 HOH X 56 456 56 HOH HOH . D 4 HOH X 57 457 57 HOH HOH . D 4 HOH X 58 458 58 HOH HOH . D 4 HOH X 59 459 59 HOH HOH . D 4 HOH X 60 460 60 HOH HOH . D 4 HOH X 61 461 61 HOH HOH . D 4 HOH X 62 462 62 HOH HOH . D 4 HOH X 63 463 63 HOH HOH . D 4 HOH X 64 464 64 HOH HOH . D 4 HOH X 65 465 65 HOH HOH . D 4 HOH X 66 466 66 HOH HOH . D 4 HOH X 67 467 67 HOH HOH . D 4 HOH X 68 468 68 HOH HOH . D 4 HOH X 69 469 69 HOH HOH . D 4 HOH X 70 470 70 HOH HOH . D 4 HOH X 71 471 71 HOH HOH . D 4 HOH X 72 472 72 HOH HOH . D 4 HOH X 73 473 73 HOH HOH . D 4 HOH X 74 474 74 HOH HOH . D 4 HOH X 75 475 75 HOH HOH . D 4 HOH X 76 476 76 HOH HOH . D 4 HOH X 77 477 77 HOH HOH . D 4 HOH X 78 478 78 HOH HOH . D 4 HOH X 79 479 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA IXF . . . C 3 -3.131 5.528 7.441 1 38.88 ? CAA IXF 302 X 1 HETATM 2 C CAV IXF . . . C 3 -2.19 4.399 7.944 1 37.46 ? CAV IXF 302 X 1 HETATM 3 C CAB IXF . . . C 3 -1.951 3.326 6.856 1 35.57 ? CAB IXF 302 X 1 HETATM 4 C CAQ IXF . . . C 3 -2.742 3.729 9.253 1 32.15 ? CAQ IXF 302 X 1 HETATM 5 C CAG IXF . . . C 3 -1.852 3.378 10.26 1 31.62 ? CAG IXF 302 X 1 HETATM 6 C CAI IXF . . . C 3 -2.306 2.776 11.46 1 30.71 ? CAI IXF 302 X 1 HETATM 7 C CAF IXF . . . C 3 -4.097 3.446 9.452 1 30.81 ? CAF IXF 302 X 1 HETATM 8 C CAH IXF . . . C 3 -4.526 2.855 10.629 1 30.27 ? CAH IXF 302 X 1 HETATM 9 C CAR IXF . . . C 3 -3.664 2.491 11.651 1 29.45 ? CAR IXF 302 X 1 HETATM 10 N NAW IXF . . . C 3 -4.156 1.843 12.8 1 26.86 ? NAW IXF 302 X 1 HETATM 11 C CAC IXF . . . C 3 -4.098 2.454 14.123 1 28.2 ? CAC IXF 302 X 1 HETATM 12 C CAS IXF . . . C 3 -4.984 0.763 12.603 1 24.2 ? CAS IXF 302 X 1 HETATM 13 C CAK IXF . . . C 3 -6.122 0.551 13.453 1 20.7 ? CAK IXF 302 X 1 HETATM 14 C C5 IXF . . . C 3 -6.932 -0.544 13.176 1 20.76 ? C5 IXF 302 X 1 HETATM 15 C C6 IXF . . . C 3 -8.109 -0.859 13.953 1 18.41 ? C6 IXF 302 X 1 HETATM 16 N NAE IXF . . . C 3 -8.52 -0.087 15.004 1 18.44 ? NAE IXF 302 X 1 HETATM 17 N N1 IXF . . . C 3 -8.832 -1.892 13.55 1 19.21 ? N1 IXF 302 X 1 HETATM 18 C C2 IXF . . . C 3 -8.526 -2.682 12.487 1 18.81 ? C2 IXF 302 X 1 HETATM 19 N NAD IXF . . . C 3 -9.266 -3.756 12.092 1 18.04 ? NAD IXF 302 X 1 HETATM 20 N N3 IXF . . . C 3 -7.401 -2.427 11.793 1 19.43 ? N3 IXF 302 X 1 HETATM 21 C C4 IXF . . . C 3 -6.625 -1.367 12.066 1 19.6 ? C4 IXF 302 X 1 HETATM 22 N NAL IXF . . . C 3 -5.516 -1.178 11.251 1 24.29 ? NAL IXF 302 X 1 HETATM 23 C CAJ IXF . . . C 3 -4.743 -0.131 11.544 1 23.98 ? CAJ IXF 302 X 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #