data_4IXG
#
_model_server_result.job_id            txUONWg9TQ1pPITOq0i4AQ 
_model_server_result.datetime_utc      '2024-11-24 08:59:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ixg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    4IXG 
#
_exptl.entry_id    4IXG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.82 
_cell.angle_gamma         90 
_cell.entry_id            4IXG 
_cell.length_a            37.211 
_cell.length_b            42.603 
_cell.length_c            60.534 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4IXG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 273 n n 
PA O2A NDP sing 274 n n 
PA O5B NDP sing 275 n n 
PA O3 NDP sing 276 n n 
O2A HOA2 NDP sing 277 n n 
O5B C5B NDP sing 278 n n 
C5B C4B NDP sing 279 n n 
C5B H51A NDP sing 280 n n 
C5B H52A NDP sing 281 n n 
C4B O4B NDP sing 282 n n 
C4B C3B NDP sing 283 n n 
C4B H4B NDP sing 284 n n 
O4B C1B NDP sing 285 n n 
C3B O3B NDP sing 286 n n 
C3B C2B NDP sing 287 n n 
C3B H3B NDP sing 288 n n 
O3B HO3A NDP sing 289 n n 
C2B O2B NDP sing 290 n n 
C2B C1B NDP sing 291 n n 
C2B H2B NDP sing 292 n n 
O2B P2B NDP sing 293 n n 
C1B N9A NDP sing 294 n n 
C1B H1B NDP sing 295 n n 
N9A C8A NDP sing 296 n y 
N9A C4A NDP sing 297 n y 
C8A N7A NDP doub 298 n y 
C8A H8A NDP sing 299 n n 
N7A C5A NDP sing 300 n y 
C5A C6A NDP sing 301 n y 
C5A C4A NDP doub 302 n y 
C6A N6A NDP sing 303 n n 
C6A N1A NDP doub 304 n y 
N6A H61A NDP sing 305 n n 
N6A H62A NDP sing 306 n n 
N1A C2A NDP sing 307 n y 
C2A N3A NDP doub 308 n y 
C2A H2A NDP sing 309 n n 
N3A C4A NDP sing 310 n y 
O3 PN NDP sing 311 n n 
PN O1N NDP doub 312 n n 
PN O2N NDP sing 313 n n 
PN O5D NDP sing 314 n n 
O2N H21N NDP sing 315 n n 
O5D C5D NDP sing 316 n n 
C5D C4D NDP sing 317 n n 
C5D H51N NDP sing 318 n n 
C5D H52N NDP sing 319 n n 
C4D O4D NDP sing 320 n n 
C4D C3D NDP sing 321 n n 
C4D H4D NDP sing 322 n n 
O4D C1D NDP sing 323 n n 
C3D O3D NDP sing 324 n n 
C3D C2D NDP sing 325 n n 
C3D H3D NDP sing 326 n n 
O3D HO3N NDP sing 327 n n 
C2D O2D NDP sing 328 n n 
C2D C1D NDP sing 329 n n 
C2D H2D NDP sing 330 n n 
O2D HO2N NDP sing 331 n n 
C1D N1N NDP sing 332 n n 
C1D H1D NDP sing 333 n n 
N1N C2N NDP sing 334 n n 
N1N C6N NDP sing 335 n n 
C2N C3N NDP doub 336 n n 
C2N H2N NDP sing 337 n n 
C3N C7N NDP sing 338 n n 
C3N C4N NDP sing 339 n n 
C7N O7N NDP doub 340 n n 
C7N N7N NDP sing 341 n n 
N7N H71N NDP sing 342 n n 
N7N H72N NDP sing 343 n n 
C4N C5N NDP sing 344 n n 
C4N H41N NDP sing 345 n n 
C4N H42N NDP sing 346 n n 
C5N C6N NDP doub 347 n n 
C5N H5N NDP sing 348 n n 
C6N H6N NDP sing 349 n n 
P2B O1X NDP doub 350 n n 
P2B O2X NDP sing 351 n n 
P2B O3X NDP sing 352 n n 
O2X HOP2 NDP sing 353 n n 
O3X HOP3 NDP sing 354 n n 
#
_atom_sites.entry_id                     4IXG 
_atom_sites.fract_transf_matrix[1][1]    0.026873 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002264 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023472 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016578 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NDP X 1 301 1 NDP NDP . 
C 3 IXG X 1 302 1 IXG IXG . 
D 4 HOH X 1 401 1 HOH HOH . 
D 4 HOH X 2 402 2 HOH HOH . 
D 4 HOH X 3 403 3 HOH HOH . 
D 4 HOH X 4 404 4 HOH HOH . 
D 4 HOH X 5 405 5 HOH HOH . 
D 4 HOH X 6 406 6 HOH HOH . 
D 4 HOH X 7 407 7 HOH HOH . 
D 4 HOH X 8 408 8 HOH HOH . 
D 4 HOH X 9 409 9 HOH HOH . 
D 4 HOH X 10 410 10 HOH HOH . 
D 4 HOH X 11 411 11 HOH HOH . 
D 4 HOH X 12 412 12 HOH HOH . 
D 4 HOH X 13 413 13 HOH HOH . 
D 4 HOH X 14 414 14 HOH HOH . 
D 4 HOH X 15 415 16 HOH HOH . 
D 4 HOH X 16 416 18 HOH HOH . 
D 4 HOH X 17 417 19 HOH HOH . 
D 4 HOH X 18 418 20 HOH HOH . 
D 4 HOH X 19 419 21 HOH HOH . 
D 4 HOH X 20 420 22 HOH HOH . 
D 4 HOH X 21 421 23 HOH HOH . 
D 4 HOH X 22 422 24 HOH HOH . 
D 4 HOH X 23 423 25 HOH HOH . 
D 4 HOH X 24 424 26 HOH HOH . 
D 4 HOH X 25 425 27 HOH HOH . 
D 4 HOH X 26 426 28 HOH HOH . 
D 4 HOH X 27 427 29 HOH HOH . 
D 4 HOH X 28 428 30 HOH HOH . 
D 4 HOH X 29 429 31 HOH HOH . 
D 4 HOH X 30 430 32 HOH HOH . 
D 4 HOH X 31 431 33 HOH HOH . 
D 4 HOH X 32 432 34 HOH HOH . 
D 4 HOH X 33 433 35 HOH HOH . 
D 4 HOH X 34 434 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . B 2 15.722 4.112 23.258 1 25.47 ? PA NDP 301 X 1 
HETATM 2 O O1A NDP . . . B 2 14.609 3.578 24.052 1 25.84 ? O1A NDP 301 X 1 
HETATM 3 O O2A NDP . . . B 2 15.557 4.53 21.835 1 23.19 ? O2A NDP 301 X 1 
HETATM 4 O O5B NDP . . . B 2 16.279 5.498 23.864 1 23.61 ? O5B NDP 301 X 1 
HETATM 5 C C5B NDP . . . B 2 16.466 5.46 25.312 1 25.56 ? C5B NDP 301 X 1 
HETATM 6 C C4B NDP . . . B 2 16.506 6.846 25.774 1 25.22 ? C4B NDP 301 X 1 
HETATM 7 O O4B NDP . . . B 2 15.384 7.548 25.2 1 23.99 ? O4B NDP 301 X 1 
HETATM 8 C C3B NDP . . . B 2 16.407 7.086 27.29 1 28.1 ? C3B NDP 301 X 1 
HETATM 9 O O3B NDP . . . B 2 17.696 7.186 27.869 1 29.85 ? O3B NDP 301 X 1 
HETATM 10 C C2B NDP . . . B 2 15.718 8.434 27.336 1 28.55 ? C2B NDP 301 X 1 
HETATM 11 O O2B NDP . . . B 2 16.482 9.451 26.772 1 29.69 ? O2B NDP 301 X 1 
HETATM 12 C C1B NDP . . . B 2 14.632 8.211 26.279 1 25.53 ? C1B NDP 301 X 1 
HETATM 13 N N9A NDP . . . B 2 13.394 7.509 26.836 1 26.6 ? N9A NDP 301 X 1 
HETATM 14 C C8A NDP . . . B 2 12.974 6.281 26.524 1 23.54 ? C8A NDP 301 X 1 
HETATM 15 N N7A NDP . . . B 2 11.872 5.984 27.165 1 24.64 ? N7A NDP 301 X 1 
HETATM 16 C C5A NDP . . . B 2 11.55 7.092 27.856 1 26.95 ? C5A NDP 301 X 1 
HETATM 17 C C6A NDP . . . B 2 10.511 7.389 28.713 1 28.86 ? C6A NDP 301 X 1 
HETATM 18 N N6A NDP . . . B 2 9.535 6.473 28.956 1 30.48 ? N6A NDP 301 X 1 
HETATM 19 N N1A NDP . . . B 2 10.492 8.609 29.269 1 26.37 ? N1A NDP 301 X 1 
HETATM 20 C C2A NDP . . . B 2 11.425 9.51 29.053 1 23.94 ? C2A NDP 301 X 1 
HETATM 21 N N3A NDP . . . B 2 12.458 9.24 28.264 1 24.54 ? N3A NDP 301 X 1 
HETATM 22 C C4A NDP . . . B 2 12.526 8.05 27.671 1 25.44 ? C4A NDP 301 X 1 
HETATM 23 O O3 NDP . . . B 2 16.988 3.173 23.383 1 24.37 ? O3 NDP 301 X 1 
HETATM 24 P PN NDP . . . B 2 17.273 1.748 23.826 1 29.93 ? PN NDP 301 X 1 
HETATM 25 O O1N NDP . . . B 2 16.36 1.228 24.841 1 29.46 ? O1N NDP 301 X 1 
HETATM 26 O O2N NDP . . . B 2 18.743 1.759 24.109 1 33.33 ? O2N NDP 301 X 1 
HETATM 27 O O5D NDP . . . B 2 17.048 0.946 22.496 1 30.85 ? O5D NDP 301 X 1 
HETATM 28 C C5D NDP . . . B 2 17.914 1.274 21.394 1 30.63 ? C5D NDP 301 X 1 
HETATM 29 C C4D NDP . . . B 2 18.173 0.033 20.528 1 29.25 ? C4D NDP 301 X 1 
HETATM 30 O O4D NDP . . . B 2 16.899 -0.318 19.867 1 27.59 ? O4D NDP 301 X 1 
HETATM 31 C C3D NDP . . . B 2 19.168 0.391 19.409 1 24.99 ? C3D NDP 301 X 1 
HETATM 32 O O3D NDP . . . B 2 20.015 -0.743 19.11 1 26.17 ? O3D NDP 301 X 1 
HETATM 33 C C2D NDP . . . B 2 18.308 0.518 18.183 1 24.99 ? C2D NDP 301 X 1 
HETATM 34 O O2D NDP . . . B 2 19.035 0.022 17.086 1 24.38 ? O2D NDP 301 X 1 
HETATM 35 C C1D NDP . . . B 2 17.241 -0.556 18.493 1 24.2 ? C1D NDP 301 X 1 
HETATM 36 N N1N NDP . . . B 2 15.972 -0.475 17.829 1 22.3 ? N1N NDP 301 X 1 
HETATM 37 C C2N NDP . . . B 2 15.51 -1.676 17.241 1 21.85 ? C2N NDP 301 X 1 
HETATM 38 C C3N NDP . . . B 2 14.275 -1.677 16.635 1 24.94 ? C3N NDP 301 X 1 
HETATM 39 C C7N NDP . . . B 2 13.734 -2.953 15.958 1 21.04 ? C7N NDP 301 X 1 
HETATM 40 O O7N NDP . . . B 2 14.443 -3.935 15.718 1 20.49 ? O7N NDP 301 X 1 
HETATM 41 N N7N NDP . . . B 2 12.461 -2.9 15.726 1 20.69 ? N7N NDP 301 X 1 
HETATM 42 C C4N NDP . . . B 2 13.538 -0.486 16.633 1 22.74 ? C4N NDP 301 X 1 
HETATM 43 C C5N NDP . . . B 2 14.022 0.717 17.182 1 21.34 ? C5N NDP 301 X 1 
HETATM 44 C C6N NDP . . . B 2 15.259 0.714 17.849 1 21 ? C6N NDP 301 X 1 
HETATM 45 P P2B NDP . . . B 2 17.459 10.558 27.678 1 30.37 ? P2B NDP 301 X 1 
HETATM 46 O O1X NDP . . . B 2 18.616 9.605 28.17 1 28.1 ? O1X NDP 301 X 1 
HETATM 47 O O2X NDP . . . B 2 17.605 11.628 26.678 1 25.48 ? O2X NDP 301 X 1 
HETATM 48 O O3X NDP . . . B 2 16.648 10.871 29.024 1 30.23 ? O3X NDP 301 X 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           48 
#