data_4IXS # _model_server_result.job_id A9mk0rYTEI6pG6QNrtY5-Q _model_server_result.datetime_utc '2024-11-23 16:34:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ixs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4IXS # _exptl.entry_id 4IXS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IXS _cell.length_a 85.722 _cell.length_b 124.357 _cell.length_c 146.164 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IXS _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 85.722 0 73.082 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 209 A THR 209 1_555 A N LLP 210 A LLP 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale2 A C LLP 210 A LLP 210 1_555 A N TYR 211 A TYR 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 ? covale ? covale3 B C THR 209 B THR 209 1_555 B N LLP 210 B LLP 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.307 ? covale ? covale4 B C LLP 210 B LLP 210 1_555 B N TYR 211 B TYR 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 132 n n C1 C2 GOL sing 133 n n C1 H11 GOL sing 134 n n C1 H12 GOL sing 135 n n O1 HO1 GOL sing 136 n n C2 O2 GOL sing 137 n n C2 C3 GOL sing 138 n n C2 H2 GOL sing 139 n n O2 HO2 GOL sing 140 n n C3 O3 GOL sing 141 n n C3 H31 GOL sing 142 n n C3 H32 GOL sing 143 n n O3 HO3 GOL sing 144 n n # _atom_sites.entry_id 4IXS _atom_sites.fract_transf_matrix[1][1] 0.011666 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008041 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006842 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 401 401 GOL GOL . D 3 CO3 B 1 401 401 CO3 CO3 . E 4 HOH A 1 501 501 HOH HOH . E 4 HOH A 2 502 502 HOH HOH . E 4 HOH A 3 503 503 HOH HOH . E 4 HOH A 4 504 504 HOH HOH . E 4 HOH A 5 505 505 HOH HOH . E 4 HOH A 6 506 506 HOH HOH . E 4 HOH A 7 507 507 HOH HOH . E 4 HOH A 8 508 508 HOH HOH . E 4 HOH A 9 509 509 HOH HOH . E 4 HOH A 10 510 510 HOH HOH . E 4 HOH A 11 511 511 HOH HOH . E 4 HOH A 12 512 512 HOH HOH . E 4 HOH A 13 513 513 HOH HOH . E 4 HOH A 14 514 514 HOH HOH . E 4 HOH A 15 515 515 HOH HOH . E 4 HOH A 16 516 516 HOH HOH . E 4 HOH A 17 517 517 HOH HOH . E 4 HOH A 18 518 518 HOH HOH . E 4 HOH A 19 519 519 HOH HOH . E 4 HOH A 20 520 520 HOH HOH . E 4 HOH A 21 521 521 HOH HOH . E 4 HOH A 22 522 522 HOH HOH . E 4 HOH A 23 523 523 HOH HOH . E 4 HOH A 24 524 524 HOH HOH . E 4 HOH A 25 525 525 HOH HOH . E 4 HOH A 26 526 526 HOH HOH . E 4 HOH A 27 527 527 HOH HOH . E 4 HOH A 28 528 528 HOH HOH . E 4 HOH A 29 529 529 HOH HOH . E 4 HOH A 30 530 530 HOH HOH . E 4 HOH A 31 531 531 HOH HOH . E 4 HOH A 32 532 532 HOH HOH . E 4 HOH A 33 533 533 HOH HOH . E 4 HOH A 34 534 534 HOH HOH . E 4 HOH A 35 535 535 HOH HOH . E 4 HOH A 36 536 536 HOH HOH . E 4 HOH A 37 537 537 HOH HOH . E 4 HOH A 38 538 538 HOH HOH . E 4 HOH A 39 539 539 HOH HOH . E 4 HOH A 40 540 540 HOH HOH . E 4 HOH A 41 541 541 HOH HOH . E 4 HOH A 42 542 542 HOH HOH . E 4 HOH A 43 543 543 HOH HOH . E 4 HOH A 44 544 544 HOH HOH . E 4 HOH A 45 545 545 HOH HOH . E 4 HOH A 46 546 546 HOH HOH . E 4 HOH A 47 547 547 HOH HOH . E 4 HOH A 48 548 548 HOH HOH . E 4 HOH A 49 549 549 HOH HOH . E 4 HOH A 50 550 550 HOH HOH . E 4 HOH A 51 551 551 HOH HOH . E 4 HOH A 52 552 552 HOH HOH . E 4 HOH A 53 553 553 HOH HOH . E 4 HOH A 54 554 554 HOH HOH . E 4 HOH A 55 555 555 HOH HOH . E 4 HOH A 56 556 556 HOH HOH . E 4 HOH A 57 557 557 HOH HOH . E 4 HOH A 58 558 558 HOH HOH . E 4 HOH A 59 559 559 HOH HOH . E 4 HOH A 60 560 560 HOH HOH . E 4 HOH A 61 561 561 HOH HOH . E 4 HOH A 62 562 562 HOH HOH . E 4 HOH A 63 563 563 HOH HOH . E 4 HOH A 64 564 564 HOH HOH . E 4 HOH A 65 565 565 HOH HOH . E 4 HOH A 66 566 566 HOH HOH . E 4 HOH A 67 567 567 HOH HOH . E 4 HOH A 68 568 568 HOH HOH . E 4 HOH A 69 569 569 HOH HOH . E 4 HOH A 70 570 570 HOH HOH . E 4 HOH A 71 571 571 HOH HOH . E 4 HOH A 72 572 572 HOH HOH . E 4 HOH A 73 573 573 HOH HOH . E 4 HOH A 74 574 574 HOH HOH . E 4 HOH A 75 575 575 HOH HOH . E 4 HOH A 76 576 576 HOH HOH . E 4 HOH A 77 577 577 HOH HOH . E 4 HOH A 78 578 578 HOH HOH . E 4 HOH A 79 579 579 HOH HOH . E 4 HOH A 80 580 580 HOH HOH . E 4 HOH A 81 581 581 HOH HOH . E 4 HOH A 82 582 582 HOH HOH . E 4 HOH A 83 583 583 HOH HOH . E 4 HOH A 84 584 584 HOH HOH . E 4 HOH A 85 585 585 HOH HOH . E 4 HOH A 86 586 586 HOH HOH . E 4 HOH A 87 587 587 HOH HOH . E 4 HOH A 88 588 588 HOH HOH . E 4 HOH A 89 589 589 HOH HOH . E 4 HOH A 90 590 590 HOH HOH . E 4 HOH A 91 591 591 HOH HOH . E 4 HOH A 92 592 592 HOH HOH . E 4 HOH A 93 593 593 HOH HOH . E 4 HOH A 94 594 594 HOH HOH . E 4 HOH A 95 595 595 HOH HOH . E 4 HOH A 96 596 596 HOH HOH . E 4 HOH A 97 597 597 HOH HOH . E 4 HOH A 98 598 598 HOH HOH . E 4 HOH A 99 599 599 HOH HOH . E 4 HOH A 100 600 600 HOH HOH . E 4 HOH A 101 601 601 HOH HOH . E 4 HOH A 102 602 602 HOH HOH . E 4 HOH A 103 603 603 HOH HOH . E 4 HOH A 104 604 604 HOH HOH . E 4 HOH A 105 605 605 HOH HOH . E 4 HOH A 106 606 606 HOH HOH . E 4 HOH A 107 607 607 HOH HOH . E 4 HOH A 108 608 608 HOH HOH . E 4 HOH A 109 609 609 HOH HOH . E 4 HOH A 110 610 610 HOH HOH . E 4 HOH A 111 611 611 HOH HOH . E 4 HOH A 112 612 612 HOH HOH . E 4 HOH A 113 613 613 HOH HOH . E 4 HOH A 114 614 614 HOH HOH . E 4 HOH A 115 615 615 HOH HOH . E 4 HOH A 116 616 616 HOH HOH . E 4 HOH A 117 617 617 HOH HOH . E 4 HOH A 118 618 618 HOH HOH . E 4 HOH A 119 619 619 HOH HOH . E 4 HOH A 120 620 620 HOH HOH . E 4 HOH A 121 621 621 HOH HOH . E 4 HOH A 122 622 622 HOH HOH . E 4 HOH A 123 623 623 HOH HOH . F 4 HOH B 1 501 501 HOH HOH . F 4 HOH B 2 502 502 HOH HOH . F 4 HOH B 3 503 503 HOH HOH . F 4 HOH B 4 504 504 HOH HOH . F 4 HOH B 5 505 505 HOH HOH . F 4 HOH B 6 506 506 HOH HOH . F 4 HOH B 7 507 507 HOH HOH . F 4 HOH B 8 508 508 HOH HOH . F 4 HOH B 9 509 509 HOH HOH . F 4 HOH B 10 510 510 HOH HOH . F 4 HOH B 11 511 511 HOH HOH . F 4 HOH B 12 512 512 HOH HOH . F 4 HOH B 13 513 513 HOH HOH . F 4 HOH B 14 514 514 HOH HOH . F 4 HOH B 15 515 515 HOH HOH . F 4 HOH B 16 516 516 HOH HOH . F 4 HOH B 17 517 517 HOH HOH . F 4 HOH B 18 518 518 HOH HOH . F 4 HOH B 19 519 519 HOH HOH . F 4 HOH B 20 520 520 HOH HOH . F 4 HOH B 21 521 521 HOH HOH . F 4 HOH B 22 522 522 HOH HOH . F 4 HOH B 23 523 523 HOH HOH . F 4 HOH B 24 524 524 HOH HOH . F 4 HOH B 25 525 525 HOH HOH . F 4 HOH B 26 526 526 HOH HOH . F 4 HOH B 27 527 527 HOH HOH . F 4 HOH B 28 528 528 HOH HOH . F 4 HOH B 29 529 529 HOH HOH . F 4 HOH B 30 530 530 HOH HOH . F 4 HOH B 31 531 531 HOH HOH . F 4 HOH B 32 532 532 HOH HOH . F 4 HOH B 33 533 533 HOH HOH . F 4 HOH B 34 534 534 HOH HOH . F 4 HOH B 35 535 535 HOH HOH . F 4 HOH B 36 536 536 HOH HOH . F 4 HOH B 37 537 537 HOH HOH . F 4 HOH B 38 538 538 HOH HOH . F 4 HOH B 39 539 539 HOH HOH . F 4 HOH B 40 540 540 HOH HOH . F 4 HOH B 41 541 541 HOH HOH . F 4 HOH B 42 542 542 HOH HOH . F 4 HOH B 43 543 543 HOH HOH . F 4 HOH B 44 544 544 HOH HOH . F 4 HOH B 45 545 545 HOH HOH . F 4 HOH B 46 546 546 HOH HOH . F 4 HOH B 47 547 547 HOH HOH . F 4 HOH B 48 548 548 HOH HOH . F 4 HOH B 49 549 549 HOH HOH . F 4 HOH B 50 550 550 HOH HOH . F 4 HOH B 51 551 551 HOH HOH . F 4 HOH B 52 552 552 HOH HOH . F 4 HOH B 53 553 553 HOH HOH . F 4 HOH B 54 554 554 HOH HOH . F 4 HOH B 55 555 555 HOH HOH . F 4 HOH B 56 556 556 HOH HOH . F 4 HOH B 57 557 557 HOH HOH . F 4 HOH B 58 558 558 HOH HOH . F 4 HOH B 59 559 559 HOH HOH . F 4 HOH B 60 560 560 HOH HOH . F 4 HOH B 61 561 561 HOH HOH . F 4 HOH B 62 562 562 HOH HOH . F 4 HOH B 63 563 563 HOH HOH . F 4 HOH B 64 564 564 HOH HOH . F 4 HOH B 65 565 565 HOH HOH . F 4 HOH B 66 566 566 HOH HOH . F 4 HOH B 67 567 567 HOH HOH . F 4 HOH B 68 568 568 HOH HOH . F 4 HOH B 69 569 569 HOH HOH . F 4 HOH B 70 570 570 HOH HOH . F 4 HOH B 71 571 571 HOH HOH . F 4 HOH B 72 572 572 HOH HOH . F 4 HOH B 73 573 573 HOH HOH . F 4 HOH B 74 574 574 HOH HOH . F 4 HOH B 75 575 575 HOH HOH . F 4 HOH B 76 576 576 HOH HOH . F 4 HOH B 77 577 577 HOH HOH . F 4 HOH B 78 578 578 HOH HOH . F 4 HOH B 79 579 579 HOH HOH . F 4 HOH B 80 580 580 HOH HOH . F 4 HOH B 81 581 581 HOH HOH . F 4 HOH B 82 582 582 HOH HOH . F 4 HOH B 83 583 583 HOH HOH . F 4 HOH B 84 584 584 HOH HOH . F 4 HOH B 85 585 585 HOH HOH . F 4 HOH B 86 586 586 HOH HOH . F 4 HOH B 87 587 587 HOH HOH . F 4 HOH B 88 588 588 HOH HOH . F 4 HOH B 89 589 589 HOH HOH . F 4 HOH B 90 590 590 HOH HOH . F 4 HOH B 91 591 591 HOH HOH . F 4 HOH B 92 592 592 HOH HOH . F 4 HOH B 93 593 593 HOH HOH . F 4 HOH B 94 594 594 HOH HOH . F 4 HOH B 95 595 595 HOH HOH . F 4 HOH B 96 596 596 HOH HOH . F 4 HOH B 97 597 597 HOH HOH . F 4 HOH B 98 598 598 HOH HOH . F 4 HOH B 99 599 599 HOH HOH . F 4 HOH B 100 600 600 HOH HOH . F 4 HOH B 101 601 601 HOH HOH . F 4 HOH B 102 602 602 HOH HOH . F 4 HOH B 103 603 603 HOH HOH . F 4 HOH B 104 604 604 HOH HOH . F 4 HOH B 105 605 605 HOH HOH . F 4 HOH B 106 606 606 HOH HOH . F 4 HOH B 107 607 607 HOH HOH . F 4 HOH B 108 608 608 HOH HOH . F 4 HOH B 109 609 609 HOH HOH . F 4 HOH B 110 610 610 HOH HOH . F 4 HOH B 111 611 611 HOH HOH . F 4 HOH B 112 612 612 HOH HOH . F 4 HOH B 113 613 613 HOH HOH . F 4 HOH B 114 614 614 HOH HOH . F 4 HOH B 115 615 615 HOH HOH . F 4 HOH B 116 616 616 HOH HOH . F 4 HOH B 117 617 617 HOH HOH . F 4 HOH B 118 618 618 HOH HOH . F 4 HOH B 119 619 619 HOH HOH . F 4 HOH B 120 620 620 HOH HOH . F 4 HOH B 121 621 621 HOH HOH . F 4 HOH B 122 622 622 HOH HOH . F 4 HOH B 123 623 623 HOH HOH . F 4 HOH B 124 624 624 HOH HOH . F 4 HOH B 125 625 625 HOH HOH . F 4 HOH B 126 626 626 HOH HOH . F 4 HOH B 127 627 627 HOH HOH . F 4 HOH B 128 628 628 HOH HOH . F 4 HOH B 129 629 629 HOH HOH . F 4 HOH B 130 630 630 HOH HOH . F 4 HOH B 131 631 631 HOH HOH . F 4 HOH B 132 632 632 HOH HOH . F 4 HOH B 133 633 633 HOH HOH . F 4 HOH B 134 634 634 HOH HOH . F 4 HOH B 135 635 635 HOH HOH . F 4 HOH B 136 636 636 HOH HOH . F 4 HOH B 137 637 637 HOH HOH . F 4 HOH B 138 638 638 HOH HOH . F 4 HOH B 139 639 639 HOH HOH . F 4 HOH B 140 640 640 HOH HOH . F 4 HOH B 141 641 641 HOH HOH . F 4 HOH B 142 642 642 HOH HOH . F 4 HOH B 143 643 643 HOH HOH . F 4 HOH B 144 644 644 HOH HOH . F 4 HOH B 145 645 645 HOH HOH . F 4 HOH B 146 646 646 HOH HOH . F 4 HOH B 147 647 647 HOH HOH . F 4 HOH B 148 648 648 HOH HOH . F 4 HOH B 149 649 649 HOH HOH . F 4 HOH B 150 650 650 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 26.681 -10.341 9.893 1 42.76 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . C 2 25.539 -11.142 9.743 1 38.19 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . C 2 27.535 -10.776 11.109 1 42.85 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . C 2 28.049 -12.085 10.917 1 44.37 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . C 2 28.725 -9.837 11.204 1 44.16 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . C 2 29.576 -9.98 10.063 1 46.75 ? O3 GOL 401 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #