data_4IXX
#
_model_server_result.job_id            -qryxYikoL0MOsasCZuuHQ 
_model_server_result.datetime_utc      '2024-11-07 06:31:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ixx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":401}' 
#
_entry.id    4IXX 
#
_exptl.entry_id    4IXX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.72 
_cell.angle_gamma         90 
_cell.entry_id            4IXX 
_cell.length_a            73.064 
_cell.length_b            132.432 
_cell.length_c            75.028 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4IXX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
? 2 J N N 
? 2 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 63 A CYS 63 1_555 E MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? 
metalc ? metalc2 A NE2 HIS 270 A HIS 270 1_555 E MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc3 A OE2 GLU 304 A GLU 304 1_555 E MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc4 A OD2 ASP 324 A ASP 324 1_555 E MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc5 B SG CYS 63 B CYS 63 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? 
metalc ? metalc6 B NE2 HIS 270 B HIS 270 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? 
metalc ? metalc7 B OE2 GLU 304 B GLU 304 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.775 ? 
metalc ? metalc8 B OD2 ASP 324 B ASP 324 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? 
metalc ? metalc9 C SG CYS 63 C CYS 63 1_555 J MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? 
metalc ? metalc10 C NE2 HIS 270 C HIS 270 1_555 J MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc11 C OE2 GLU 304 C GLU 304 1_555 J MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc12 C OD2 ASP 324 C ASP 324 1_555 J MN MN . C MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.756 ? 
metalc ? metalc13 D SG CYS 63 D CYS 63 1_555 M MN MN . D MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? 
metalc ? metalc14 D NE2 HIS 270 D HIS 270 1_555 M MN MN . D MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc15 D OE2 GLU 304 D GLU 304 1_555 M MN MN . D MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.78 ? 
metalc ? metalc16 D OD2 ASP 324 D ASP 324 1_555 M MN MN . D MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.786 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4IXX 
_atom_sites.fract_transf_matrix[1][1]    0.013687 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001371 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007551 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013395 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 MN A 1 401 1 MN MN . 
F 3 SO4 A 1 402 2 SO4 SO4 . 
G 3 SO4 A 1 403 5 SO4 SO4 . 
H 2 MN B 1 401 2 MN MN . 
I 3 SO4 B 1 402 4 SO4 SO4 . 
J 2 MN C 1 401 3 MN MN . 
K 3 SO4 C 1 402 3 SO4 SO4 . 
L 3 SO4 C 1 403 7 SO4 SO4 . 
M 2 MN D 1 401 4 MN MN . 
N 3 SO4 D 1 402 1 SO4 SO4 . 
O 3 SO4 D 1 403 6 SO4 SO4 . 
P 4 HOH A 1 501 1 HOH HOH . 
P 4 HOH A 2 502 15 HOH HOH . 
P 4 HOH A 3 503 16 HOH HOH . 
P 4 HOH A 4 504 17 HOH HOH . 
P 4 HOH A 5 505 19 HOH HOH . 
P 4 HOH A 6 506 23 HOH HOH . 
P 4 HOH A 7 507 26 HOH HOH . 
P 4 HOH A 8 508 27 HOH HOH . 
P 4 HOH A 9 509 28 HOH HOH . 
P 4 HOH A 10 510 29 HOH HOH . 
P 4 HOH A 11 511 31 HOH HOH . 
P 4 HOH A 12 512 32 HOH HOH . 
P 4 HOH A 13 513 34 HOH HOH . 
P 4 HOH A 14 514 41 HOH HOH . 
P 4 HOH A 15 515 42 HOH HOH . 
P 4 HOH A 16 516 43 HOH HOH . 
P 4 HOH A 17 517 44 HOH HOH . 
P 4 HOH A 18 518 45 HOH HOH . 
P 4 HOH A 19 519 46 HOH HOH . 
P 4 HOH A 20 520 47 HOH HOH . 
P 4 HOH A 21 521 48 HOH HOH . 
P 4 HOH A 22 522 55 HOH HOH . 
P 4 HOH A 23 523 56 HOH HOH . 
P 4 HOH A 24 524 57 HOH HOH . 
P 4 HOH A 25 525 58 HOH HOH . 
P 4 HOH A 26 526 59 HOH HOH . 
P 4 HOH A 27 527 60 HOH HOH . 
P 4 HOH A 28 528 65 HOH HOH . 
P 4 HOH A 29 529 71 HOH HOH . 
P 4 HOH A 30 530 73 HOH HOH . 
P 4 HOH A 31 531 76 HOH HOH . 
P 4 HOH A 32 532 77 HOH HOH . 
P 4 HOH A 33 533 78 HOH HOH . 
P 4 HOH A 34 534 80 HOH HOH . 
P 4 HOH A 35 535 81 HOH HOH . 
P 4 HOH A 36 536 84 HOH HOH . 
P 4 HOH A 37 537 85 HOH HOH . 
P 4 HOH A 38 538 90 HOH HOH . 
P 4 HOH A 39 539 95 HOH HOH . 
P 4 HOH A 40 540 99 HOH HOH . 
Q 4 HOH B 1 501 3 HOH HOH . 
Q 4 HOH B 2 502 18 HOH HOH . 
Q 4 HOH B 3 503 21 HOH HOH . 
Q 4 HOH B 4 504 33 HOH HOH . 
Q 4 HOH B 5 505 35 HOH HOH . 
Q 4 HOH B 6 506 50 HOH HOH . 
Q 4 HOH B 7 507 51 HOH HOH . 
Q 4 HOH B 8 508 52 HOH HOH . 
Q 4 HOH B 9 509 67 HOH HOH . 
Q 4 HOH B 10 510 68 HOH HOH . 
Q 4 HOH B 11 511 74 HOH HOH . 
Q 4 HOH B 12 512 82 HOH HOH . 
Q 4 HOH B 13 513 86 HOH HOH . 
Q 4 HOH B 14 514 100 HOH HOH . 
Q 4 HOH B 15 515 101 HOH HOH . 
Q 4 HOH B 16 516 104 HOH HOH . 
R 4 HOH C 1 501 4 HOH HOH . 
R 4 HOH C 2 502 5 HOH HOH . 
R 4 HOH C 3 503 14 HOH HOH . 
R 4 HOH C 4 504 39 HOH HOH . 
R 4 HOH C 5 505 40 HOH HOH . 
R 4 HOH C 6 506 53 HOH HOH . 
R 4 HOH C 7 507 54 HOH HOH . 
R 4 HOH C 8 508 64 HOH HOH . 
R 4 HOH C 9 509 66 HOH HOH . 
R 4 HOH C 10 510 70 HOH HOH . 
R 4 HOH C 11 511 83 HOH HOH . 
R 4 HOH C 12 512 87 HOH HOH . 
R 4 HOH C 13 513 89 HOH HOH . 
R 4 HOH C 14 514 91 HOH HOH . 
R 4 HOH C 15 515 94 HOH HOH . 
R 4 HOH C 16 516 97 HOH HOH . 
R 4 HOH C 17 517 98 HOH HOH . 
S 4 HOH D 1 501 2 HOH HOH . 
S 4 HOH D 2 502 9 HOH HOH . 
S 4 HOH D 3 503 10 HOH HOH . 
S 4 HOH D 4 504 11 HOH HOH . 
S 4 HOH D 5 505 12 HOH HOH . 
S 4 HOH D 6 506 13 HOH HOH . 
S 4 HOH D 7 507 20 HOH HOH . 
S 4 HOH D 8 508 22 HOH HOH . 
S 4 HOH D 9 509 25 HOH HOH . 
S 4 HOH D 10 510 30 HOH HOH . 
S 4 HOH D 11 511 36 HOH HOH . 
S 4 HOH D 12 512 37 HOH HOH . 
S 4 HOH D 13 513 38 HOH HOH . 
S 4 HOH D 14 514 61 HOH HOH . 
S 4 HOH D 15 515 62 HOH HOH . 
S 4 HOH D 16 516 63 HOH HOH . 
S 4 HOH D 17 517 69 HOH HOH . 
S 4 HOH D 18 518 72 HOH HOH . 
S 4 HOH D 19 519 75 HOH HOH . 
S 4 HOH D 20 520 79 HOH HOH . 
S 4 HOH D 21 521 92 HOH HOH . 
S 4 HOH D 22 522 93 HOH HOH . 
S 4 HOH D 23 523 96 HOH HOH . 
S 4 HOH D 24 524 102 HOH HOH . 
S 4 HOH D 25 525 103 HOH HOH . 
S 4 HOH D 26 526 105 HOH HOH . 
S 4 HOH D 27 527 106 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         M 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -26.427 
_atom_site.Cartn_y               -31.494 
_atom_site.Cartn_z               -41.125 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        40.42 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          D 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           332 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#