data_4IZY # _model_server_result.job_id Of1Ylredn_a90XbN6JwJrA _model_server_result.datetime_utc '2025-02-05 04:46:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4izy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4IZY # _exptl.entry_id 4IZY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 469.6 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description trans-4-[(4-{4-[4-(methylsulfonyl)piperidin-1-yl]-1H-indol-1-yl}pyrimidin-2-yl)amino]cyclohexanol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4IZY _cell.length_a 60.426 _cell.length_b 82.371 _cell.length_c 82.027 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4IZY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H31 N5 O3 S' _chem_comp.formula_weight 469.6 _chem_comp.id 1J2 _chem_comp.mon_nstd_flag . _chem_comp.name trans-4-[(4-{4-[4-(methylsulfonyl)piperidin-1-yl]-1H-indol-1-yl}pyrimidin-2-yl)amino]cyclohexanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O32 S30 1J2 doub 1 n n C25 C26 1J2 sing 2 n n C25 N16 1J2 sing 3 n n C26 C27 1J2 sing 4 n n C14 C13 1J2 doub 5 n y C14 C15 1J2 sing 6 n y C13 C12 1J2 sing 7 n y O24 C21 1J2 sing 8 n n C22 C21 1J2 sing 9 n n C22 C23 1J2 sing 10 n n C27 S30 1J2 sing 11 n n C27 C28 1J2 sing 12 n n S30 O31 1J2 doub 13 n n S30 C33 1J2 sing 14 n n N16 C15 1J2 sing 15 n n N16 C29 1J2 sing 16 n n C15 C10 1J2 doub 17 n y C21 C20 1J2 sing 18 n n C12 C11 1J2 doub 19 n y C23 C18 1J2 sing 20 n n C29 C28 1J2 sing 21 n n C20 C19 1J2 sing 22 n n C10 C11 1J2 sing 23 n y C10 C8 1J2 sing 24 n y C11 N7 1J2 sing 25 n y C18 C19 1J2 sing 26 n n C18 N17 1J2 sing 27 n n C8 C9 1J2 doub 28 n y N7 C4 1J2 sing 29 n n N7 C9 1J2 sing 30 n y N17 C2 1J2 sing 31 n n N3 C4 1J2 doub 32 n y N3 C2 1J2 sing 33 n y C4 C5 1J2 sing 34 n y C2 N1 1J2 doub 35 n y N1 C6 1J2 sing 36 n y C5 C6 1J2 doub 37 n y C5 H1 1J2 sing 38 n n C6 H2 1J2 sing 39 n n C8 H3 1J2 sing 40 n n C9 H4 1J2 sing 41 n n C12 H5 1J2 sing 42 n n C13 H6 1J2 sing 43 n n C14 H7 1J2 sing 44 n n N17 H8 1J2 sing 45 n n C18 H9 1J2 sing 46 n n C19 H10 1J2 sing 47 n n C19 H11 1J2 sing 48 n n C20 H12 1J2 sing 49 n n C20 H13 1J2 sing 50 n n C21 H14 1J2 sing 51 n n C22 H15 1J2 sing 52 n n C22 H16 1J2 sing 53 n n C23 H17 1J2 sing 54 n n C23 H18 1J2 sing 55 n n O24 H19 1J2 sing 56 n n C25 H20 1J2 sing 57 n n C25 H21 1J2 sing 58 n n C26 H22 1J2 sing 59 n n C26 H23 1J2 sing 60 n n C27 H24 1J2 sing 61 n n C28 H25 1J2 sing 62 n n C28 H26 1J2 sing 63 n n C29 H27 1J2 sing 64 n n C29 H28 1J2 sing 65 n n C33 H29 1J2 sing 66 n n C33 H30 1J2 sing 67 n n C33 H31 1J2 sing 68 n n # _atom_sites.entry_id 4IZY _atom_sites.fract_transf_matrix[1][1] 0.016549 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01214 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012191 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1J2 A 1 401 1 1J2 460 . D 4 HOH A 1 501 1003 HOH HOH . D 4 HOH A 2 502 1006 HOH HOH . D 4 HOH A 3 503 1008 HOH HOH . D 4 HOH A 4 504 1009 HOH HOH . D 4 HOH A 5 505 1011 HOH HOH . D 4 HOH A 6 506 1012 HOH HOH . D 4 HOH A 7 507 1013 HOH HOH . D 4 HOH A 8 508 1014 HOH HOH . D 4 HOH A 9 509 1015 HOH HOH . D 4 HOH A 10 510 1016 HOH HOH . D 4 HOH A 11 511 1018 HOH HOH . D 4 HOH A 12 512 1020 HOH HOH . D 4 HOH A 13 513 1021 HOH HOH . D 4 HOH A 14 514 1022 HOH HOH . D 4 HOH A 15 515 1023 HOH HOH . D 4 HOH A 16 516 1024 HOH HOH . D 4 HOH A 17 517 1025 HOH HOH . D 4 HOH A 18 518 1026 HOH HOH . D 4 HOH A 19 519 1027 HOH HOH . D 4 HOH A 20 520 1030 HOH HOH . D 4 HOH A 21 521 1032 HOH HOH . D 4 HOH A 22 522 1033 HOH HOH . D 4 HOH A 23 523 1034 HOH HOH . D 4 HOH A 24 524 1035 HOH HOH . D 4 HOH A 25 525 1037 HOH HOH . D 4 HOH A 26 526 1038 HOH HOH . D 4 HOH A 27 527 1040 HOH HOH . D 4 HOH A 28 528 1041 HOH HOH . D 4 HOH A 29 529 1043 HOH HOH . D 4 HOH A 30 530 1044 HOH HOH . D 4 HOH A 31 531 1045 HOH HOH . D 4 HOH A 32 532 1046 HOH HOH . D 4 HOH A 33 533 1047 HOH HOH . D 4 HOH A 34 534 1048 HOH HOH . D 4 HOH A 35 535 1049 HOH HOH . D 4 HOH A 36 536 1050 HOH HOH . D 4 HOH A 37 537 1052 HOH HOH . D 4 HOH A 38 538 1053 HOH HOH . D 4 HOH A 39 539 1055 HOH HOH . D 4 HOH A 40 540 1056 HOH HOH . D 4 HOH A 41 541 1057 HOH HOH . D 4 HOH A 42 542 1059 HOH HOH . D 4 HOH A 43 543 1060 HOH HOH . D 4 HOH A 44 544 1061 HOH HOH . D 4 HOH A 45 545 1068 HOH HOH . D 4 HOH A 46 546 1070 HOH HOH . D 4 HOH A 47 547 1071 HOH HOH . D 4 HOH A 48 548 1074 HOH HOH . D 4 HOH A 49 549 1075 HOH HOH . D 4 HOH A 50 550 1076 HOH HOH . D 4 HOH A 51 551 1078 HOH HOH . D 4 HOH A 52 552 1082 HOH HOH . D 4 HOH A 53 553 1085 HOH HOH . D 4 HOH A 54 554 1089 HOH HOH . D 4 HOH A 55 555 1090 HOH HOH . D 4 HOH A 56 556 1092 HOH HOH . D 4 HOH A 57 557 1098 HOH HOH . D 4 HOH A 58 558 1110 HOH HOH . D 4 HOH A 59 559 1113 HOH HOH . D 4 HOH A 60 560 1124 HOH HOH . D 4 HOH A 61 561 1125 HOH HOH . D 4 HOH A 62 562 1131 HOH HOH . D 4 HOH A 63 563 1142 HOH HOH . D 4 HOH A 64 564 1144 HOH HOH . D 4 HOH A 65 565 1147 HOH HOH . D 4 HOH A 66 566 1160 HOH HOH . D 4 HOH A 67 567 2005 HOH HOH . D 4 HOH A 68 568 2007 HOH HOH . D 4 HOH A 69 569 2017 HOH HOH . D 4 HOH A 70 570 2026 HOH HOH . D 4 HOH A 71 571 2029 HOH HOH . D 4 HOH A 72 572 2043 HOH HOH . D 4 HOH A 73 573 2050 HOH HOH . E 4 HOH B 1 201 1054 HOH HOH . E 4 HOH B 2 202 1029 HOH HOH . E 4 HOH B 3 203 1031 HOH HOH . E 4 HOH B 4 204 1039 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 1J2 . . . C 3 -12.853 11.145 -18.232 1 46.2 ? N1 1J2 401 A 1 HETATM 2 C C2 1J2 . . . C 3 -12.186 10.639 -19.258 1 45.83 ? C2 1J2 401 A 1 HETATM 3 N N3 1J2 . . . C 3 -12.518 9.457 -19.774 1 45.14 ? N3 1J2 401 A 1 HETATM 4 C C4 1J2 . . . C 3 -13.541 8.736 -19.295 1 45.23 ? C4 1J2 401 A 1 HETATM 5 C C5 1J2 . . . C 3 -14.252 9.241 -18.198 1 43.48 ? C5 1J2 401 A 1 HETATM 6 C C6 1J2 . . . C 3 -13.88 10.477 -17.693 1 45.61 ? C6 1J2 401 A 1 HETATM 7 N N7 1J2 . . . C 3 -13.862 7.482 -19.835 1 45.01 ? N7 1J2 401 A 1 HETATM 8 C C8 1J2 . . . C 3 -14.766 5.449 -19.927 1 47.34 ? C8 1J2 401 A 1 HETATM 9 C C9 1J2 . . . C 3 -14.644 6.557 -19.184 1 46.09 ? C9 1J2 401 A 1 HETATM 10 C C10 1J2 . . . C 3 -13.996 5.658 -21.16 1 45.89 ? C10 1J2 401 A 1 HETATM 11 C C11 1J2 . . . C 3 -13.445 6.955 -21.049 1 45.27 ? C11 1J2 401 A 1 HETATM 12 C C12 1J2 . . . C 3 -12.652 7.441 -22.092 1 45.51 ? C12 1J2 401 A 1 HETATM 13 C C13 1J2 . . . C 3 -12.414 6.656 -23.205 1 46.1 ? C13 1J2 401 A 1 HETATM 14 C C14 1J2 . . . C 3 -12.952 5.371 -23.31 1 45.39 ? C14 1J2 401 A 1 HETATM 15 C C15 1J2 . . . C 3 -13.75 4.852 -22.296 1 45.94 ? C15 1J2 401 A 1 HETATM 16 N N16 1J2 . . . C 3 -14.31 3.55 -22.391 1 46.35 ? N16 1J2 401 A 1 HETATM 17 N N17 1J2 . . . C 3 -11.127 11.354 -19.794 1 47.66 ? N17 1J2 401 A 1 HETATM 18 C C18 1J2 . . . C 3 -10.297 10.757 -20.852 1 48.19 ? C18 1J2 401 A 1 HETATM 19 C C19 1J2 . . . C 3 -9.229 9.842 -20.229 1 49.43 ? C19 1J2 401 A 1 HETATM 20 C C20 1J2 . . . C 3 -8.315 9.256 -21.314 1 50.86 ? C20 1J2 401 A 1 HETATM 21 C C21 1J2 . . . C 3 -7.674 10.374 -22.146 1 50.11 ? C21 1J2 401 A 1 HETATM 22 C C22 1J2 . . . C 3 -8.76 11.255 -22.769 1 49.45 ? C22 1J2 401 A 1 HETATM 23 C C23 1J2 . . . C 3 -9.642 11.873 -21.677 1 48.64 ? C23 1J2 401 A 1 HETATM 24 O O24 1J2 . . . C 3 -6.933 9.752 -23.192 1 53.65 ? O24 1J2 401 A 1 HETATM 25 C C25 1J2 . . . C 3 -14.377 2.951 -23.746 1 44.3 ? C25 1J2 401 A 1 HETATM 26 C C26 1J2 . . . C 3 -15.456 1.86 -23.738 1 44.7 ? C26 1J2 401 A 1 HETATM 27 C C27 1J2 . . . C 3 -15.105 0.798 -22.675 1 45.9 ? C27 1J2 401 A 1 HETATM 28 C C28 1J2 . . . C 3 -14.924 1.465 -21.293 1 45.07 ? C28 1J2 401 A 1 HETATM 29 C C29 1J2 . . . C 3 -13.861 2.577 -21.376 1 44.62 ? C29 1J2 401 A 1 HETATM 30 S S30 1J2 . . . C 3 -16.377 -0.516 -22.633 1 47.62 ? S30 1J2 401 A 1 HETATM 31 O O31 1J2 . . . C 3 -17.543 -0.082 -21.932 1 45.61 ? O31 1J2 401 A 1 HETATM 32 O O32 1J2 . . . C 3 -16.533 -1.026 -23.956 1 45.43 ? O32 1J2 401 A 1 HETATM 33 C C33 1J2 . . . C 3 -15.54 -1.79 -21.632 1 45.08 ? C33 1J2 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 33 #