data_4J0B # _model_server_result.job_id KwcQvk6tNXo_J6NesP6oIg _model_server_result.datetime_utc '2025-01-03 01:55:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j0b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":805}' # _entry.id 4J0B # _exptl.entry_id 4J0B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 134.29 _cell.angle_gamma 90 _cell.entry_id 4J0B _cell.length_a 177.779 _cell.length_b 96.566 _cell.length_c 124.977 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J0B _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 444 A CYS 516 1_555 A SG CYS 470 A CYS 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf2 B SG CYS 444 B CYS 516 1_555 B SG CYS 470 B CYS 542 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.038 ? metalc ? metalc1 A OD1 ASN 62 A ASN 134 1_555 G MG MG . A MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc2 A OD1 ASN 132 A ASN 204 1_555 D CO CO . A CO 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc3 E O1B ADP . A ADP 803 1_555 F BE BEF . A BEF 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.513 ? metalc ? metalc4 E O2B ADP . A ADP 803 1_555 G MG MG . A MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc5 E O1A ADP . A ADP 803 1_555 G MG MG . A MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc6 G MG MG . A MG 805 1_555 M O HOH . A HOH 917 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc7 G MG MG . A MG 805 1_555 M O HOH . A HOH 960 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc8 B OD1 ASN 62 B ASN 134 1_555 L MG MG . B MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc9 J O1B ADP . B ADP 803 1_555 K BE BEF . B BEF 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? metalc ? metalc10 J O1A ADP . B ADP 803 1_555 L MG MG . B MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc11 J O2B ADP . B ADP 803 1_555 L MG MG . B MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc12 L MG MG . B MG 805 1_555 N O HOH . B HOH 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc13 L MG MG . B MG 805 1_555 N O HOH . B HOH 919 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4J0B _atom_sites.fract_transf_matrix[1][1] 0.005625 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005487 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010356 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 801 801 CO CO . D 2 CO A 1 802 802 CO CO . E 3 ADP A 1 803 1000 ADP ADP . F 4 BEF A 1 804 1100 BEF BEF . G 5 MG A 1 805 1200 MG MG . H 2 CO B 1 801 800 CO CO . I 2 CO B 1 802 801 CO CO . J 3 ADP B 1 803 1000 ADP ADP . K 4 BEF B 1 804 1100 BEF BEF . L 5 MG B 1 805 1200 MG MG . M 6 HOH A 1 901 1 HOH HOH . M 6 HOH A 2 902 2 HOH HOH . M 6 HOH A 3 903 4 HOH HOH . M 6 HOH A 4 904 5 HOH HOH . M 6 HOH A 5 905 7 HOH HOH . M 6 HOH A 6 906 8 HOH HOH . M 6 HOH A 7 907 9 HOH HOH . M 6 HOH A 8 908 11 HOH HOH . M 6 HOH A 9 909 12 HOH HOH . M 6 HOH A 10 910 13 HOH HOH . M 6 HOH A 11 911 14 HOH HOH . M 6 HOH A 12 912 15 HOH HOH . M 6 HOH A 13 913 18 HOH HOH . M 6 HOH A 14 914 19 HOH HOH . M 6 HOH A 15 915 20 HOH HOH . M 6 HOH A 16 916 21 HOH HOH . M 6 HOH A 17 917 23 HOH HOH . M 6 HOH A 18 918 25 HOH HOH . M 6 HOH A 19 919 26 HOH HOH . M 6 HOH A 20 920 29 HOH HOH . M 6 HOH A 21 921 30 HOH HOH . M 6 HOH A 22 922 32 HOH HOH . M 6 HOH A 23 923 40 HOH HOH . M 6 HOH A 24 924 42 HOH HOH . M 6 HOH A 25 925 43 HOH HOH . M 6 HOH A 26 926 44 HOH HOH . M 6 HOH A 27 927 48 HOH HOH . M 6 HOH A 28 928 50 HOH HOH . M 6 HOH A 29 929 51 HOH HOH . M 6 HOH A 30 930 52 HOH HOH . M 6 HOH A 31 931 53 HOH HOH . M 6 HOH A 32 932 54 HOH HOH . M 6 HOH A 33 933 55 HOH HOH . M 6 HOH A 34 934 56 HOH HOH . M 6 HOH A 35 935 57 HOH HOH . M 6 HOH A 36 936 58 HOH HOH . M 6 HOH A 37 937 59 HOH HOH . M 6 HOH A 38 938 60 HOH HOH . M 6 HOH A 39 939 61 HOH HOH . M 6 HOH A 40 940 62 HOH HOH . M 6 HOH A 41 941 69 HOH HOH . M 6 HOH A 42 942 78 HOH HOH . M 6 HOH A 43 943 80 HOH HOH . M 6 HOH A 44 944 82 HOH HOH . M 6 HOH A 45 945 83 HOH HOH . M 6 HOH A 46 946 84 HOH HOH . M 6 HOH A 47 947 87 HOH HOH . M 6 HOH A 48 948 88 HOH HOH . M 6 HOH A 49 949 93 HOH HOH . M 6 HOH A 50 950 94 HOH HOH . M 6 HOH A 51 951 100 HOH HOH . M 6 HOH A 52 952 102 HOH HOH . M 6 HOH A 53 953 105 HOH HOH . M 6 HOH A 54 954 109 HOH HOH . M 6 HOH A 55 955 112 HOH HOH . M 6 HOH A 56 956 113 HOH HOH . M 6 HOH A 57 957 114 HOH HOH . M 6 HOH A 58 958 115 HOH HOH . M 6 HOH A 59 959 117 HOH HOH . M 6 HOH A 60 960 119 HOH HOH . M 6 HOH A 61 961 122 HOH HOH . M 6 HOH A 62 962 125 HOH HOH . M 6 HOH A 63 963 127 HOH HOH . M 6 HOH A 64 964 136 HOH HOH . M 6 HOH A 65 965 142 HOH HOH . M 6 HOH A 66 966 143 HOH HOH . M 6 HOH A 67 967 145 HOH HOH . M 6 HOH A 68 968 149 HOH HOH . M 6 HOH A 69 969 150 HOH HOH . M 6 HOH A 70 970 152 HOH HOH . M 6 HOH A 71 971 161 HOH HOH . M 6 HOH A 72 972 162 HOH HOH . M 6 HOH A 73 973 163 HOH HOH . M 6 HOH A 74 974 167 HOH HOH . M 6 HOH A 75 975 171 HOH HOH . M 6 HOH A 76 976 175 HOH HOH . M 6 HOH A 77 977 177 HOH HOH . M 6 HOH A 78 978 187 HOH HOH . M 6 HOH A 79 979 188 HOH HOH . M 6 HOH A 80 980 189 HOH HOH . M 6 HOH A 81 981 195 HOH HOH . M 6 HOH A 82 982 201 HOH HOH . M 6 HOH A 83 983 202 HOH HOH . M 6 HOH A 84 984 204 HOH HOH . M 6 HOH A 85 985 206 HOH HOH . M 6 HOH A 86 986 209 HOH HOH . M 6 HOH A 87 987 219 HOH HOH . M 6 HOH A 88 988 220 HOH HOH . M 6 HOH A 89 989 223 HOH HOH . M 6 HOH A 90 990 224 HOH HOH . N 6 HOH B 1 901 3 HOH HOH . N 6 HOH B 2 902 6 HOH HOH . N 6 HOH B 3 903 10 HOH HOH . N 6 HOH B 4 904 16 HOH HOH . N 6 HOH B 5 905 17 HOH HOH . N 6 HOH B 6 906 27 HOH HOH . N 6 HOH B 7 907 28 HOH HOH . N 6 HOH B 8 908 31 HOH HOH . N 6 HOH B 9 909 33 HOH HOH . N 6 HOH B 10 910 34 HOH HOH . N 6 HOH B 11 911 35 HOH HOH . N 6 HOH B 12 912 37 HOH HOH . N 6 HOH B 13 913 38 HOH HOH . N 6 HOH B 14 914 41 HOH HOH . N 6 HOH B 15 915 45 HOH HOH . N 6 HOH B 16 916 46 HOH HOH . N 6 HOH B 17 917 47 HOH HOH . N 6 HOH B 18 918 49 HOH HOH . N 6 HOH B 19 919 63 HOH HOH . N 6 HOH B 20 920 64 HOH HOH . N 6 HOH B 21 921 66 HOH HOH . N 6 HOH B 22 922 67 HOH HOH . N 6 HOH B 23 923 68 HOH HOH . N 6 HOH B 24 924 70 HOH HOH . N 6 HOH B 25 925 71 HOH HOH . N 6 HOH B 26 926 72 HOH HOH . N 6 HOH B 27 927 73 HOH HOH . N 6 HOH B 28 928 74 HOH HOH . N 6 HOH B 29 929 76 HOH HOH . N 6 HOH B 30 930 79 HOH HOH . N 6 HOH B 31 931 81 HOH HOH . N 6 HOH B 32 932 86 HOH HOH . N 6 HOH B 33 933 89 HOH HOH . N 6 HOH B 34 934 90 HOH HOH . N 6 HOH B 35 935 91 HOH HOH . N 6 HOH B 36 936 92 HOH HOH . N 6 HOH B 37 937 95 HOH HOH . N 6 HOH B 38 938 98 HOH HOH . N 6 HOH B 39 939 99 HOH HOH . N 6 HOH B 40 940 101 HOH HOH . N 6 HOH B 41 941 107 HOH HOH . N 6 HOH B 42 942 108 HOH HOH . N 6 HOH B 43 943 110 HOH HOH . N 6 HOH B 44 944 111 HOH HOH . N 6 HOH B 45 945 116 HOH HOH . N 6 HOH B 46 946 120 HOH HOH . N 6 HOH B 47 947 123 HOH HOH . N 6 HOH B 48 948 124 HOH HOH . N 6 HOH B 49 949 126 HOH HOH . N 6 HOH B 50 950 129 HOH HOH . N 6 HOH B 51 951 130 HOH HOH . N 6 HOH B 52 952 131 HOH HOH . N 6 HOH B 53 953 132 HOH HOH . N 6 HOH B 54 954 133 HOH HOH . N 6 HOH B 55 955 135 HOH HOH . N 6 HOH B 56 956 137 HOH HOH . N 6 HOH B 57 957 138 HOH HOH . N 6 HOH B 58 958 139 HOH HOH . N 6 HOH B 59 959 140 HOH HOH . N 6 HOH B 60 960 144 HOH HOH . N 6 HOH B 61 961 146 HOH HOH . N 6 HOH B 62 962 147 HOH HOH . N 6 HOH B 63 963 148 HOH HOH . N 6 HOH B 64 964 151 HOH HOH . N 6 HOH B 65 965 154 HOH HOH . N 6 HOH B 66 966 155 HOH HOH . N 6 HOH B 67 967 157 HOH HOH . N 6 HOH B 68 968 158 HOH HOH . N 6 HOH B 69 969 160 HOH HOH . N 6 HOH B 70 970 164 HOH HOH . N 6 HOH B 71 971 168 HOH HOH . N 6 HOH B 72 972 169 HOH HOH . N 6 HOH B 73 973 170 HOH HOH . N 6 HOH B 74 974 172 HOH HOH . N 6 HOH B 75 975 173 HOH HOH . N 6 HOH B 76 976 174 HOH HOH . N 6 HOH B 77 977 181 HOH HOH . N 6 HOH B 78 978 182 HOH HOH . N 6 HOH B 79 979 183 HOH HOH . N 6 HOH B 80 980 190 HOH HOH . N 6 HOH B 81 981 193 HOH HOH . N 6 HOH B 82 982 194 HOH HOH . N 6 HOH B 83 983 200 HOH HOH . N 6 HOH B 84 984 205 HOH HOH . N 6 HOH B 85 985 207 HOH HOH . N 6 HOH B 86 986 208 HOH HOH . N 6 HOH B 87 987 210 HOH HOH . N 6 HOH B 88 988 212 HOH HOH . N 6 HOH B 89 989 213 HOH HOH . N 6 HOH B 90 990 214 HOH HOH . N 6 HOH B 91 991 215 HOH HOH . N 6 HOH B 92 992 216 HOH HOH . N 6 HOH B 93 993 218 HOH HOH . N 6 HOH B 94 994 221 HOH HOH . N 6 HOH B 95 995 222 HOH HOH . N 6 HOH B 96 996 225 HOH HOH . N 6 HOH B 97 997 227 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 5 _atom_site.Cartn_x 22.261 _atom_site.Cartn_y -5.306 _atom_site.Cartn_z -63.213 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 805 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #