data_4J0S # _model_server_result.job_id mK7HC8QIdG6a3Vzdb8nluQ _model_server_result.datetime_utc '2024-11-16 11:52:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j0s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4J0S # _exptl.entry_id 4J0S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4J0S _cell.length_a 38.655 _cell.length_b 42.981 _cell.length_c 79.547 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J0S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 124 n n C1 C2 EDO sing 125 n n C1 H11 EDO sing 126 n n C1 H12 EDO sing 127 n n O1 HO1 EDO sing 128 n n C2 O2 EDO sing 129 n n C2 H21 EDO sing 130 n n C2 H22 EDO sing 131 n n O2 HO2 EDO sing 132 n n # _atom_sites.entry_id 4J0S _atom_sites.fract_transf_matrix[1][1] 0.02587 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023266 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012571 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 201 1 EDO EDO . C 2 EDO A 1 202 2 EDO EDO . D 2 EDO A 1 203 3 EDO EDO . E 2 EDO A 1 204 4 EDO EDO . F 3 1H3 A 1 205 1 1H3 DRG . G 4 HOH A 1 301 1 HOH HOH . G 4 HOH A 2 302 2 HOH HOH . G 4 HOH A 3 303 4 HOH HOH . G 4 HOH A 4 304 6 HOH HOH . G 4 HOH A 5 305 9 HOH HOH . G 4 HOH A 6 306 10 HOH HOH . G 4 HOH A 7 307 11 HOH HOH . G 4 HOH A 8 308 13 HOH HOH . G 4 HOH A 9 309 14 HOH HOH . G 4 HOH A 10 310 15 HOH HOH . G 4 HOH A 11 311 16 HOH HOH . G 4 HOH A 12 312 17 HOH HOH . G 4 HOH A 13 313 19 HOH HOH . G 4 HOH A 14 314 20 HOH HOH . G 4 HOH A 15 315 22 HOH HOH . G 4 HOH A 16 316 23 HOH HOH . G 4 HOH A 17 317 24 HOH HOH . G 4 HOH A 18 318 25 HOH HOH . G 4 HOH A 19 319 26 HOH HOH . G 4 HOH A 20 320 27 HOH HOH . G 4 HOH A 21 321 28 HOH HOH . G 4 HOH A 22 322 29 HOH HOH . G 4 HOH A 23 323 30 HOH HOH . G 4 HOH A 24 324 31 HOH HOH . G 4 HOH A 25 325 33 HOH HOH . G 4 HOH A 26 326 34 HOH HOH . G 4 HOH A 27 327 36 HOH HOH . G 4 HOH A 28 328 37 HOH HOH . G 4 HOH A 29 329 38 HOH HOH . G 4 HOH A 30 330 39 HOH HOH . G 4 HOH A 31 331 40 HOH HOH . G 4 HOH A 32 332 41 HOH HOH . G 4 HOH A 33 333 42 HOH HOH . G 4 HOH A 34 334 43 HOH HOH . G 4 HOH A 35 335 46 HOH HOH . G 4 HOH A 36 336 47 HOH HOH . G 4 HOH A 37 337 48 HOH HOH . G 4 HOH A 38 338 49 HOH HOH . G 4 HOH A 39 339 51 HOH HOH . G 4 HOH A 40 340 52 HOH HOH . G 4 HOH A 41 341 54 HOH HOH . G 4 HOH A 42 342 58 HOH HOH . G 4 HOH A 43 343 59 HOH HOH . G 4 HOH A 44 344 60 HOH HOH . G 4 HOH A 45 345 63 HOH HOH . G 4 HOH A 46 346 64 HOH HOH . G 4 HOH A 47 347 65 HOH HOH . G 4 HOH A 48 348 66 HOH HOH . G 4 HOH A 49 349 70 HOH HOH . G 4 HOH A 50 350 71 HOH HOH . G 4 HOH A 51 351 72 HOH HOH . G 4 HOH A 52 352 73 HOH HOH . G 4 HOH A 53 353 74 HOH HOH . G 4 HOH A 54 354 76 HOH HOH . G 4 HOH A 55 355 77 HOH HOH . G 4 HOH A 56 356 78 HOH HOH . G 4 HOH A 57 357 79 HOH HOH . G 4 HOH A 58 358 80 HOH HOH . G 4 HOH A 59 359 81 HOH HOH . G 4 HOH A 60 360 82 HOH HOH . G 4 HOH A 61 361 86 HOH HOH . G 4 HOH A 62 362 87 HOH HOH . G 4 HOH A 63 363 88 HOH HOH . G 4 HOH A 64 364 90 HOH HOH . G 4 HOH A 65 365 91 HOH HOH . G 4 HOH A 66 366 92 HOH HOH . G 4 HOH A 67 367 93 HOH HOH . G 4 HOH A 68 368 94 HOH HOH . G 4 HOH A 69 369 95 HOH HOH . G 4 HOH A 70 370 96 HOH HOH . G 4 HOH A 71 371 97 HOH HOH . G 4 HOH A 72 372 98 HOH HOH . G 4 HOH A 73 373 99 HOH HOH . G 4 HOH A 74 374 100 HOH HOH . G 4 HOH A 75 375 101 HOH HOH . G 4 HOH A 76 376 102 HOH HOH . G 4 HOH A 77 377 103 HOH HOH . G 4 HOH A 78 378 104 HOH HOH . G 4 HOH A 79 379 105 HOH HOH . G 4 HOH A 80 380 106 HOH HOH . G 4 HOH A 81 381 107 HOH HOH . G 4 HOH A 82 382 109 HOH HOH . G 4 HOH A 83 383 110 HOH HOH . G 4 HOH A 84 384 111 HOH HOH . G 4 HOH A 85 385 112 HOH HOH . G 4 HOH A 86 386 113 HOH HOH . G 4 HOH A 87 387 114 HOH HOH . G 4 HOH A 88 388 116 HOH HOH . G 4 HOH A 89 389 117 HOH HOH . G 4 HOH A 90 390 118 HOH HOH . G 4 HOH A 91 391 119 HOH HOH . G 4 HOH A 92 392 120 HOH HOH . G 4 HOH A 93 393 121 HOH HOH . G 4 HOH A 94 394 122 HOH HOH . G 4 HOH A 95 395 123 HOH HOH . G 4 HOH A 96 396 124 HOH HOH . G 4 HOH A 97 397 125 HOH HOH . G 4 HOH A 98 398 126 HOH HOH . G 4 HOH A 99 399 127 HOH HOH . G 4 HOH A 100 400 128 HOH HOH . G 4 HOH A 101 401 129 HOH HOH . G 4 HOH A 102 402 130 HOH HOH . G 4 HOH A 103 403 131 HOH HOH . G 4 HOH A 104 404 132 HOH HOH . G 4 HOH A 105 405 133 HOH HOH . G 4 HOH A 106 406 134 HOH HOH . G 4 HOH A 107 407 135 HOH HOH . G 4 HOH A 108 408 136 HOH HOH . G 4 HOH A 109 409 137 HOH HOH . G 4 HOH A 110 410 138 HOH HOH . G 4 HOH A 111 411 139 HOH HOH . G 4 HOH A 112 412 140 HOH HOH . G 4 HOH A 113 413 141 HOH HOH . G 4 HOH A 114 414 142 HOH HOH . G 4 HOH A 115 415 143 HOH HOH . G 4 HOH A 116 416 144 HOH HOH . G 4 HOH A 117 417 145 HOH HOH . G 4 HOH A 118 418 146 HOH HOH . G 4 HOH A 119 419 147 HOH HOH . G 4 HOH A 120 420 148 HOH HOH . G 4 HOH A 121 421 149 HOH HOH . G 4 HOH A 122 422 150 HOH HOH . G 4 HOH A 123 423 151 HOH HOH . G 4 HOH A 124 424 152 HOH HOH . G 4 HOH A 125 425 153 HOH HOH . G 4 HOH A 126 426 154 HOH HOH . G 4 HOH A 127 427 155 HOH HOH . G 4 HOH A 128 428 156 HOH HOH . G 4 HOH A 129 429 157 HOH HOH . G 4 HOH A 130 430 158 HOH HOH . G 4 HOH A 131 431 159 HOH HOH . G 4 HOH A 132 432 160 HOH HOH . G 4 HOH A 133 433 161 HOH HOH . G 4 HOH A 134 434 162 HOH HOH . G 4 HOH A 135 435 163 HOH HOH . G 4 HOH A 136 436 164 HOH HOH . G 4 HOH A 137 437 165 HOH HOH . G 4 HOH A 138 438 166 HOH HOH . G 4 HOH A 139 439 167 HOH HOH . G 4 HOH A 140 440 168 HOH HOH . G 4 HOH A 141 441 169 HOH HOH . G 4 HOH A 142 442 170 HOH HOH . G 4 HOH A 143 443 171 HOH HOH . G 4 HOH A 144 444 172 HOH HOH . G 4 HOH A 145 445 173 HOH HOH . G 4 HOH A 146 446 174 HOH HOH . G 4 HOH A 147 447 175 HOH HOH . G 4 HOH A 148 448 176 HOH HOH . G 4 HOH A 149 449 177 HOH HOH . G 4 HOH A 150 450 178 HOH HOH . G 4 HOH A 151 451 179 HOH HOH . G 4 HOH A 152 452 180 HOH HOH . G 4 HOH A 153 453 181 HOH HOH . G 4 HOH A 154 454 182 HOH HOH . G 4 HOH A 155 455 183 HOH HOH . G 4 HOH A 156 456 184 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 22.232 13.735 5.061 1 17.91 ? C1 EDO 201 A 1 HETATM 2 O O1 EDO . . . B 2 23.02 13.094 6.083 1 17.23 ? O1 EDO 201 A 1 HETATM 3 C C2 EDO . . . B 2 23.136 13.906 3.862 1 15.55 ? C2 EDO 201 A 1 HETATM 4 O O2 EDO . . . B 2 23.53 12.62 3.353 1 13.47 ? O2 EDO 201 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #