data_4J16
#
_model_server_result.job_id            DzqVKPTFbBNs6OHCWDZMJA 
_model_server_result.datetime_utc      '2024-10-18 23:36:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4j16 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":404}' 
#
_entry.id    4J16 
#
_exptl.entry_id    4J16 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4J16 
_cell.length_a            67.616 
_cell.length_b            75.038 
_cell.length_c            198.144 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4J16 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 H N N 
? 6 J N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4J16 
_atom_sites.fract_transf_matrix[1][1]    0.014789 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013327 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005047 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 NAD A 1 500 500 NAD NAD . 
E 3 NAD B 1 401 500 NAD NAD . 
F 4 CL B 1 402 1 CL CL . 
G 5 PGE B 1 403 2 PGE PGE . 
H 6 GOL B 1 404 3 GOL GOL . 
I 7 NAP C 1 501 500 NAP NAP . 
J 6 GOL C 1 502 4 GOL GOL . 
K 8 HOH A 1 601 1 HOH HOH . 
K 8 HOH A 2 602 3 HOH HOH . 
K 8 HOH A 3 603 4 HOH HOH . 
K 8 HOH A 4 604 8 HOH HOH . 
K 8 HOH A 5 605 9 HOH HOH . 
K 8 HOH A 6 606 11 HOH HOH . 
K 8 HOH A 7 607 15 HOH HOH . 
K 8 HOH A 8 608 16 HOH HOH . 
K 8 HOH A 9 609 18 HOH HOH . 
K 8 HOH A 10 610 19 HOH HOH . 
K 8 HOH A 11 611 23 HOH HOH . 
K 8 HOH A 12 612 28 HOH HOH . 
K 8 HOH A 13 613 30 HOH HOH . 
K 8 HOH A 14 614 31 HOH HOH . 
K 8 HOH A 15 615 32 HOH HOH . 
K 8 HOH A 16 616 36 HOH HOH . 
K 8 HOH A 17 617 41 HOH HOH . 
K 8 HOH A 18 618 44 HOH HOH . 
K 8 HOH A 19 619 45 HOH HOH . 
K 8 HOH A 20 620 47 HOH HOH . 
K 8 HOH A 21 621 48 HOH HOH . 
K 8 HOH A 22 622 50 HOH HOH . 
K 8 HOH A 23 623 51 HOH HOH . 
K 8 HOH A 24 624 54 HOH HOH . 
K 8 HOH A 25 625 55 HOH HOH . 
K 8 HOH A 26 626 58 HOH HOH . 
K 8 HOH A 27 627 59 HOH HOH . 
K 8 HOH A 28 628 60 HOH HOH . 
K 8 HOH A 29 629 61 HOH HOH . 
K 8 HOH A 30 630 63 HOH HOH . 
K 8 HOH A 31 631 64 HOH HOH . 
K 8 HOH A 32 632 66 HOH HOH . 
K 8 HOH A 33 633 69 HOH HOH . 
K 8 HOH A 34 634 71 HOH HOH . 
K 8 HOH A 35 635 72 HOH HOH . 
K 8 HOH A 36 636 73 HOH HOH . 
K 8 HOH A 37 637 80 HOH HOH . 
K 8 HOH A 38 638 82 HOH HOH . 
K 8 HOH A 39 639 90 HOH HOH . 
K 8 HOH A 40 640 98 HOH HOH . 
K 8 HOH A 41 641 99 HOH HOH . 
K 8 HOH A 42 642 100 HOH HOH . 
K 8 HOH A 43 643 103 HOH HOH . 
K 8 HOH A 44 644 105 HOH HOH . 
K 8 HOH A 45 645 107 HOH HOH . 
K 8 HOH A 46 646 108 HOH HOH . 
K 8 HOH A 47 647 111 HOH HOH . 
K 8 HOH A 48 648 114 HOH HOH . 
K 8 HOH A 49 649 115 HOH HOH . 
K 8 HOH A 50 650 116 HOH HOH . 
K 8 HOH A 51 651 117 HOH HOH . 
K 8 HOH A 52 652 121 HOH HOH . 
L 8 HOH B 1 501 5 HOH HOH . 
L 8 HOH B 2 502 13 HOH HOH . 
L 8 HOH B 3 503 14 HOH HOH . 
L 8 HOH B 4 504 17 HOH HOH . 
L 8 HOH B 5 505 21 HOH HOH . 
L 8 HOH B 6 506 24 HOH HOH . 
L 8 HOH B 7 507 25 HOH HOH . 
L 8 HOH B 8 508 26 HOH HOH . 
L 8 HOH B 9 509 27 HOH HOH . 
L 8 HOH B 10 510 29 HOH HOH . 
L 8 HOH B 11 511 33 HOH HOH . 
L 8 HOH B 12 512 35 HOH HOH . 
L 8 HOH B 13 513 43 HOH HOH . 
L 8 HOH B 14 514 46 HOH HOH . 
L 8 HOH B 15 515 49 HOH HOH . 
L 8 HOH B 16 516 56 HOH HOH . 
L 8 HOH B 17 517 65 HOH HOH . 
L 8 HOH B 18 518 67 HOH HOH . 
L 8 HOH B 19 519 70 HOH HOH . 
L 8 HOH B 20 520 78 HOH HOH . 
L 8 HOH B 21 521 79 HOH HOH . 
L 8 HOH B 22 522 81 HOH HOH . 
L 8 HOH B 23 523 85 HOH HOH . 
L 8 HOH B 24 524 86 HOH HOH . 
L 8 HOH B 25 525 87 HOH HOH . 
L 8 HOH B 26 526 89 HOH HOH . 
L 8 HOH B 27 527 91 HOH HOH . 
L 8 HOH B 28 528 92 HOH HOH . 
L 8 HOH B 29 529 93 HOH HOH . 
L 8 HOH B 30 530 95 HOH HOH . 
L 8 HOH B 31 531 104 HOH HOH . 
L 8 HOH B 32 532 106 HOH HOH . 
L 8 HOH B 33 533 110 HOH HOH . 
L 8 HOH B 34 534 119 HOH HOH . 
L 8 HOH B 35 535 120 HOH HOH . 
M 8 HOH C 1 601 2 HOH HOH . 
M 8 HOH C 2 602 6 HOH HOH . 
M 8 HOH C 3 603 7 HOH HOH . 
M 8 HOH C 4 604 10 HOH HOH . 
M 8 HOH C 5 605 12 HOH HOH . 
M 8 HOH C 6 606 20 HOH HOH . 
M 8 HOH C 7 607 22 HOH HOH . 
M 8 HOH C 8 608 34 HOH HOH . 
M 8 HOH C 9 609 37 HOH HOH . 
M 8 HOH C 10 610 38 HOH HOH . 
M 8 HOH C 11 611 39 HOH HOH . 
M 8 HOH C 12 612 40 HOH HOH . 
M 8 HOH C 13 613 42 HOH HOH . 
M 8 HOH C 14 614 52 HOH HOH . 
M 8 HOH C 15 615 53 HOH HOH . 
M 8 HOH C 16 616 57 HOH HOH . 
M 8 HOH C 17 617 62 HOH HOH . 
M 8 HOH C 18 618 68 HOH HOH . 
M 8 HOH C 19 619 74 HOH HOH . 
M 8 HOH C 20 620 75 HOH HOH . 
M 8 HOH C 21 621 76 HOH HOH . 
M 8 HOH C 22 622 77 HOH HOH . 
M 8 HOH C 23 623 83 HOH HOH . 
M 8 HOH C 24 624 84 HOH HOH . 
M 8 HOH C 25 625 88 HOH HOH . 
M 8 HOH C 26 626 94 HOH HOH . 
M 8 HOH C 27 627 96 HOH HOH . 
M 8 HOH C 28 628 97 HOH HOH . 
M 8 HOH C 29 629 101 HOH HOH . 
M 8 HOH C 30 630 102 HOH HOH . 
M 8 HOH C 31 631 109 HOH HOH . 
M 8 HOH C 32 632 112 HOH HOH . 
M 8 HOH C 33 633 113 HOH HOH . 
M 8 HOH C 34 634 118 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 6 21.488 -13.366 -15.848 1 57.14 ? C1 GOL 404 B 1 
HETATM 2 O O1 GOL . . . H 6 20.375 -12.62 -16.355 1 57.44 ? O1 GOL 404 B 1 
HETATM 3 C C2 GOL . . . H 6 22.364 -12.607 -14.843 1 53.42 ? C2 GOL 404 B 1 
HETATM 4 O O2 GOL . . . H 6 23.738 -12.819 -15.202 1 60.51 ? O2 GOL 404 B 1 
HETATM 5 C C3 GOL . . . H 6 22.001 -11.118 -14.78 1 61.54 ? C3 GOL 404 B 1 
HETATM 6 O O3 GOL . . . H 6 22.645 -10.305 -13.772 1 58.45 ? O3 GOL 404 B 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           364 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#