data_4J1T
#
_model_server_result.job_id            O0DZSJc4b0JHTu1Rgew7fA 
_model_server_result.datetime_utc      '2024-10-18 21:28:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4j1t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":403}' 
#
_entry.id    4J1T 
#
_exptl.entry_id    4J1T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.03 
_cell.angle_gamma         90 
_cell.entry_id            4J1T 
_cell.length_a            113.075 
_cell.length_b            68.866 
_cell.length_c            132.335 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4J1T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,G,H,I,O,P,Q 1 1 
D,E,F,J,K,L,M,N,R,S,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4J1T 
_atom_sites.fract_transf_matrix[1][1]    0.008844 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000159 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014521 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007558 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 GOL A 1 401 4 GOL GOL . 
H 4 NAD B 1 500 500 NAD NAD . 
I 5 NAP C 1 500 500 NAP NAP . 
J 3 GOL D 1 401 1 GOL GOL . 
K 3 GOL D 1 402 2 GOL GOL . 
L 3 GOL D 1 403 3 GOL GOL . 
M 4 NAD E 1 500 500 NAD NAD . 
N 5 NAP F 1 500 500 NAP NAP . 
O 6 HOH A 1 501 5 HOH HOH . 
O 6 HOH A 2 502 8 HOH HOH . 
O 6 HOH A 3 503 11 HOH HOH . 
O 6 HOH A 4 504 12 HOH HOH . 
O 6 HOH A 5 505 13 HOH HOH . 
O 6 HOH A 6 506 17 HOH HOH . 
O 6 HOH A 7 507 23 HOH HOH . 
O 6 HOH A 8 508 30 HOH HOH . 
O 6 HOH A 9 509 31 HOH HOH . 
O 6 HOH A 10 510 32 HOH HOH . 
O 6 HOH A 11 511 37 HOH HOH . 
O 6 HOH A 12 512 38 HOH HOH . 
O 6 HOH A 13 513 42 HOH HOH . 
O 6 HOH A 14 514 44 HOH HOH . 
O 6 HOH A 15 515 46 HOH HOH . 
O 6 HOH A 16 516 47 HOH HOH . 
O 6 HOH A 17 517 58 HOH HOH . 
O 6 HOH A 18 518 60 HOH HOH . 
O 6 HOH A 19 519 64 HOH HOH . 
O 6 HOH A 20 520 69 HOH HOH . 
O 6 HOH A 21 521 72 HOH HOH . 
O 6 HOH A 22 522 73 HOH HOH . 
O 6 HOH A 23 523 74 HOH HOH . 
O 6 HOH A 24 524 77 HOH HOH . 
O 6 HOH A 25 525 79 HOH HOH . 
O 6 HOH A 26 526 86 HOH HOH . 
O 6 HOH A 27 527 87 HOH HOH . 
O 6 HOH A 28 528 97 HOH HOH . 
O 6 HOH A 29 529 101 HOH HOH . 
O 6 HOH A 30 530 105 HOH HOH . 
O 6 HOH A 31 531 108 HOH HOH . 
O 6 HOH A 32 532 112 HOH HOH . 
O 6 HOH A 33 533 114 HOH HOH . 
O 6 HOH A 34 534 119 HOH HOH . 
O 6 HOH A 35 535 122 HOH HOH . 
O 6 HOH A 36 536 125 HOH HOH . 
O 6 HOH A 37 537 129 HOH HOH . 
O 6 HOH A 38 538 135 HOH HOH . 
O 6 HOH A 39 539 136 HOH HOH . 
O 6 HOH A 40 540 143 HOH HOH . 
O 6 HOH A 41 541 144 HOH HOH . 
O 6 HOH A 42 542 145 HOH HOH . 
O 6 HOH A 43 543 155 HOH HOH . 
O 6 HOH A 44 544 157 HOH HOH . 
O 6 HOH A 45 545 162 HOH HOH . 
O 6 HOH A 46 546 163 HOH HOH . 
O 6 HOH A 47 547 166 HOH HOH . 
O 6 HOH A 48 548 168 HOH HOH . 
O 6 HOH A 49 549 170 HOH HOH . 
O 6 HOH A 50 550 173 HOH HOH . 
O 6 HOH A 51 551 174 HOH HOH . 
O 6 HOH A 52 552 179 HOH HOH . 
O 6 HOH A 53 553 180 HOH HOH . 
O 6 HOH A 54 554 182 HOH HOH . 
O 6 HOH A 55 555 183 HOH HOH . 
O 6 HOH A 56 556 185 HOH HOH . 
O 6 HOH A 57 557 186 HOH HOH . 
O 6 HOH A 58 558 192 HOH HOH . 
O 6 HOH A 59 559 199 HOH HOH . 
O 6 HOH A 60 560 203 HOH HOH . 
O 6 HOH A 61 561 204 HOH HOH . 
O 6 HOH A 62 562 216 HOH HOH . 
O 6 HOH A 63 563 218 HOH HOH . 
O 6 HOH A 64 564 219 HOH HOH . 
O 6 HOH A 65 565 223 HOH HOH . 
O 6 HOH A 66 566 227 HOH HOH . 
O 6 HOH A 67 567 231 HOH HOH . 
P 6 HOH B 1 601 4 HOH HOH . 
P 6 HOH B 2 602 9 HOH HOH . 
P 6 HOH B 3 603 14 HOH HOH . 
P 6 HOH B 4 604 21 HOH HOH . 
P 6 HOH B 5 605 25 HOH HOH . 
P 6 HOH B 6 606 27 HOH HOH . 
P 6 HOH B 7 607 39 HOH HOH . 
P 6 HOH B 8 608 41 HOH HOH . 
P 6 HOH B 9 609 43 HOH HOH . 
P 6 HOH B 10 610 45 HOH HOH . 
P 6 HOH B 11 611 49 HOH HOH . 
P 6 HOH B 12 612 51 HOH HOH . 
P 6 HOH B 13 613 61 HOH HOH . 
P 6 HOH B 14 614 76 HOH HOH . 
P 6 HOH B 15 615 80 HOH HOH . 
P 6 HOH B 16 616 81 HOH HOH . 
P 6 HOH B 17 617 89 HOH HOH . 
P 6 HOH B 18 618 94 HOH HOH . 
P 6 HOH B 19 619 100 HOH HOH . 
P 6 HOH B 20 620 110 HOH HOH . 
P 6 HOH B 21 621 116 HOH HOH . 
P 6 HOH B 22 622 121 HOH HOH . 
P 6 HOH B 23 623 130 HOH HOH . 
P 6 HOH B 24 624 132 HOH HOH . 
P 6 HOH B 25 625 133 HOH HOH . 
P 6 HOH B 26 626 141 HOH HOH . 
P 6 HOH B 27 627 148 HOH HOH . 
P 6 HOH B 28 628 149 HOH HOH . 
P 6 HOH B 29 629 151 HOH HOH . 
P 6 HOH B 30 630 152 HOH HOH . 
P 6 HOH B 31 631 153 HOH HOH . 
P 6 HOH B 32 632 156 HOH HOH . 
P 6 HOH B 33 633 169 HOH HOH . 
P 6 HOH B 34 634 181 HOH HOH . 
P 6 HOH B 35 635 184 HOH HOH . 
P 6 HOH B 36 636 190 HOH HOH . 
P 6 HOH B 37 637 193 HOH HOH . 
P 6 HOH B 38 638 194 HOH HOH . 
P 6 HOH B 39 639 198 HOH HOH . 
P 6 HOH B 40 640 202 HOH HOH . 
P 6 HOH B 41 641 206 HOH HOH . 
P 6 HOH B 42 642 211 HOH HOH . 
P 6 HOH B 43 643 220 HOH HOH . 
P 6 HOH B 44 644 230 HOH HOH . 
Q 6 HOH C 1 601 24 HOH HOH . 
Q 6 HOH C 2 602 34 HOH HOH . 
Q 6 HOH C 3 603 59 HOH HOH . 
Q 6 HOH C 4 604 92 HOH HOH . 
Q 6 HOH C 5 605 113 HOH HOH . 
Q 6 HOH C 6 606 146 HOH HOH . 
Q 6 HOH C 7 607 147 HOH HOH . 
Q 6 HOH C 8 608 154 HOH HOH . 
Q 6 HOH C 9 609 158 HOH HOH . 
Q 6 HOH C 10 610 164 HOH HOH . 
Q 6 HOH C 11 611 171 HOH HOH . 
R 6 HOH D 1 501 3 HOH HOH . 
R 6 HOH D 2 502 6 HOH HOH . 
R 6 HOH D 3 503 20 HOH HOH . 
R 6 HOH D 4 504 22 HOH HOH . 
R 6 HOH D 5 505 28 HOH HOH . 
R 6 HOH D 6 506 33 HOH HOH . 
R 6 HOH D 7 507 36 HOH HOH . 
R 6 HOH D 8 508 48 HOH HOH . 
R 6 HOH D 9 509 50 HOH HOH . 
R 6 HOH D 10 510 63 HOH HOH . 
R 6 HOH D 11 511 66 HOH HOH . 
R 6 HOH D 12 512 67 HOH HOH . 
R 6 HOH D 13 513 68 HOH HOH . 
R 6 HOH D 14 514 70 HOH HOH . 
R 6 HOH D 15 515 75 HOH HOH . 
R 6 HOH D 16 516 78 HOH HOH . 
R 6 HOH D 17 517 82 HOH HOH . 
R 6 HOH D 18 518 83 HOH HOH . 
R 6 HOH D 19 519 85 HOH HOH . 
R 6 HOH D 20 520 93 HOH HOH . 
R 6 HOH D 21 521 103 HOH HOH . 
R 6 HOH D 22 522 107 HOH HOH . 
R 6 HOH D 23 523 111 HOH HOH . 
R 6 HOH D 24 524 120 HOH HOH . 
R 6 HOH D 25 525 123 HOH HOH . 
R 6 HOH D 26 526 124 HOH HOH . 
R 6 HOH D 27 527 126 HOH HOH . 
R 6 HOH D 28 528 134 HOH HOH . 
R 6 HOH D 29 529 142 HOH HOH . 
R 6 HOH D 30 530 161 HOH HOH . 
R 6 HOH D 31 531 167 HOH HOH . 
R 6 HOH D 32 532 172 HOH HOH . 
R 6 HOH D 33 533 175 HOH HOH . 
R 6 HOH D 34 534 196 HOH HOH . 
R 6 HOH D 35 535 200 HOH HOH . 
R 6 HOH D 36 536 201 HOH HOH . 
R 6 HOH D 37 537 205 HOH HOH . 
R 6 HOH D 38 538 208 HOH HOH . 
R 6 HOH D 39 539 209 HOH HOH . 
R 6 HOH D 40 540 210 HOH HOH . 
R 6 HOH D 41 541 212 HOH HOH . 
R 6 HOH D 42 542 213 HOH HOH . 
R 6 HOH D 43 543 214 HOH HOH . 
R 6 HOH D 44 544 221 HOH HOH . 
R 6 HOH D 45 545 222 HOH HOH . 
R 6 HOH D 46 546 225 HOH HOH . 
R 6 HOH D 47 547 226 HOH HOH . 
R 6 HOH D 48 548 228 HOH HOH . 
R 6 HOH D 49 549 229 HOH HOH . 
R 6 HOH D 50 550 232 HOH HOH . 
S 6 HOH E 1 601 1 HOH HOH . 
S 6 HOH E 2 602 2 HOH HOH . 
S 6 HOH E 3 603 7 HOH HOH . 
S 6 HOH E 4 604 10 HOH HOH . 
S 6 HOH E 5 605 15 HOH HOH . 
S 6 HOH E 6 606 18 HOH HOH . 
S 6 HOH E 7 607 35 HOH HOH . 
S 6 HOH E 8 608 40 HOH HOH . 
S 6 HOH E 9 609 52 HOH HOH . 
S 6 HOH E 10 610 54 HOH HOH . 
S 6 HOH E 11 611 55 HOH HOH . 
S 6 HOH E 12 612 56 HOH HOH . 
S 6 HOH E 13 613 62 HOH HOH . 
S 6 HOH E 14 614 65 HOH HOH . 
S 6 HOH E 15 615 84 HOH HOH . 
S 6 HOH E 16 616 88 HOH HOH . 
S 6 HOH E 17 617 90 HOH HOH . 
S 6 HOH E 18 618 91 HOH HOH . 
S 6 HOH E 19 619 95 HOH HOH . 
S 6 HOH E 20 620 96 HOH HOH . 
S 6 HOH E 21 621 98 HOH HOH . 
S 6 HOH E 22 622 99 HOH HOH . 
S 6 HOH E 23 623 102 HOH HOH . 
S 6 HOH E 24 624 104 HOH HOH . 
S 6 HOH E 25 625 106 HOH HOH . 
S 6 HOH E 26 626 115 HOH HOH . 
S 6 HOH E 27 627 117 HOH HOH . 
S 6 HOH E 28 628 127 HOH HOH . 
S 6 HOH E 29 629 128 HOH HOH . 
S 6 HOH E 30 630 131 HOH HOH . 
S 6 HOH E 31 631 137 HOH HOH . 
S 6 HOH E 32 632 139 HOH HOH . 
S 6 HOH E 33 633 140 HOH HOH . 
S 6 HOH E 34 634 150 HOH HOH . 
S 6 HOH E 35 635 159 HOH HOH . 
S 6 HOH E 36 636 160 HOH HOH . 
S 6 HOH E 37 637 176 HOH HOH . 
S 6 HOH E 38 638 178 HOH HOH . 
S 6 HOH E 39 639 189 HOH HOH . 
S 6 HOH E 40 640 207 HOH HOH . 
S 6 HOH E 41 641 215 HOH HOH . 
S 6 HOH E 42 642 217 HOH HOH . 
S 6 HOH E 43 643 224 HOH HOH . 
T 6 HOH F 1 601 16 HOH HOH . 
T 6 HOH F 2 602 19 HOH HOH . 
T 6 HOH F 3 603 26 HOH HOH . 
T 6 HOH F 4 604 29 HOH HOH . 
T 6 HOH F 5 605 53 HOH HOH . 
T 6 HOH F 6 606 57 HOH HOH . 
T 6 HOH F 7 607 71 HOH HOH . 
T 6 HOH F 8 608 109 HOH HOH . 
T 6 HOH F 9 609 118 HOH HOH . 
T 6 HOH F 10 610 138 HOH HOH . 
T 6 HOH F 11 611 165 HOH HOH . 
T 6 HOH F 12 612 177 HOH HOH . 
T 6 HOH F 13 613 187 HOH HOH . 
T 6 HOH F 14 614 188 HOH HOH . 
T 6 HOH F 15 615 191 HOH HOH . 
T 6 HOH F 16 616 195 HOH HOH . 
T 6 HOH F 17 617 197 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . L 3 -58.267 13.764 -7.222 1 36.8 ? C1 GOL 403 D 1 
HETATM 2 O O1 GOL . . . L 3 -58.773 14.297 -5.997 1 38.66 ? O1 GOL 403 D 1 
HETATM 3 C C2 GOL . . . L 3 -56.868 14.374 -7.377 1 38.06 ? C2 GOL 403 D 1 
HETATM 4 O O2 GOL . . . L 3 -56.076 13.616 -8.267 1 38.25 ? O2 GOL 403 D 1 
HETATM 5 C C3 GOL . . . L 3 -56.105 14.401 -6.063 1 37.94 ? C3 GOL 403 D 1 
HETATM 6 O O3 GOL . . . L 3 -54.809 14.914 -6.375 1 38.47 ? O3 GOL 403 D 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    44 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#