data_4J1X # _model_server_result.job_id XTWXRLvmAuWyHwMfKnYE6Q _model_server_result.datetime_utc '2024-11-05 19:46:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j1x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":201}' # _entry.id 4J1X # _exptl.entry_id 4J1X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4J1X _cell.length_a 111.456 _cell.length_b 111.456 _cell.length_c 151.419 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J1X _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H,K,L 1 1,2 C,I,J,M 2 1,3,4,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 222.912 111.456 0 3 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 111.456 111.456 0 4 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 111.456 111.456 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 G N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 137 A HIS 138 1_555 D FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc2 A OE1 GLU 141 A GLU 142 1_555 D FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc3 A NE2 HIS 179 A HIS 180 1_555 D FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc4 D FE FE2 . A FE2 201 1_555 E O2 1JJ . A 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc5 D FE FE2 . A FE2 201 1_555 E O3 1JJ . A 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc6 B NE2 HIS 137 B HIS 138 1_555 G FE FE2 . B FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc7 B OE1 GLU 141 B GLU 142 1_555 G FE FE2 . B FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc8 B NE2 HIS 179 B HIS 180 1_555 G FE FE2 . B FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc9 G FE FE2 . B FE2 201 1_555 H O2 1JJ . B 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc10 G FE FE2 . B FE2 201 1_555 H O3 1JJ . B 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc11 C NE2 HIS 137 C HIS 138 1_555 I FE FE2 . C FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc12 C OE1 GLU 141 C GLU 142 1_555 I FE FE2 . C FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc13 C NE2 HIS 179 C HIS 180 1_555 I FE FE2 . C FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc14 I FE FE2 . C FE2 201 1_555 J O2 1JJ . C 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.736 ? metalc ? metalc15 I FE FE2 . C FE2 201 1_555 J O3 1JJ . C 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4J1X _atom_sites.fract_transf_matrix[1][1] 0.008972 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008972 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006604 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 FE2 A 1 201 201 FE2 FE2 . E 3 1JJ A 1 202 1 1JJ SOH . F 4 GOL A 1 203 1 GOL GOL . G 2 FE2 B 1 201 202 FE2 FE2 . H 3 1JJ B 1 202 2 1JJ SOH . I 2 FE2 C 1 201 203 FE2 FE2 . J 3 1JJ C 1 202 3 1JJ SOH . K 5 HOH A 1 301 2 HOH HOH . K 5 HOH A 2 302 14 HOH HOH . K 5 HOH A 3 303 16 HOH HOH . K 5 HOH A 4 304 21 HOH HOH . K 5 HOH A 5 305 35 HOH HOH . K 5 HOH A 6 306 36 HOH HOH . K 5 HOH A 7 307 37 HOH HOH . K 5 HOH A 8 308 38 HOH HOH . K 5 HOH A 9 309 40 HOH HOH . K 5 HOH A 10 310 53 HOH HOH . K 5 HOH A 11 311 54 HOH HOH . L 5 HOH B 1 301 6 HOH HOH . L 5 HOH B 2 302 19 HOH HOH . L 5 HOH B 3 303 29 HOH HOH . L 5 HOH B 4 304 31 HOH HOH . L 5 HOH B 5 305 34 HOH HOH . L 5 HOH B 6 306 41 HOH HOH . L 5 HOH B 7 307 42 HOH HOH . L 5 HOH B 8 308 49 HOH HOH . L 5 HOH B 9 309 51 HOH HOH . L 5 HOH B 10 310 52 HOH HOH . M 5 HOH C 1 301 1 HOH HOH . M 5 HOH C 2 302 5 HOH HOH . M 5 HOH C 3 303 7 HOH HOH . M 5 HOH C 4 304 11 HOH HOH . M 5 HOH C 5 305 27 HOH HOH . M 5 HOH C 6 306 32 HOH HOH . M 5 HOH C 7 307 43 HOH HOH . M 5 HOH C 8 308 44 HOH HOH . M 5 HOH C 9 309 45 HOH HOH . M 5 HOH C 10 310 46 HOH HOH . M 5 HOH C 11 311 47 HOH HOH . M 5 HOH C 12 312 48 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 73.62 _atom_site.Cartn_y 65.856 _atom_site.Cartn_z -11.159 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.27 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 201 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #