data_4J1X
#
_model_server_result.job_id            hbDAKGP-8yHLb_wBtkZXlA 
_model_server_result.datetime_utc      '2024-11-05 19:30:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4j1x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":202}' 
#
_entry.id    4J1X 
#
_exptl.entry_id    4J1X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              140.075 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(1S)-1-hydroxypropyl]phosphonic acid' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4J1X 
_cell.length_a            111.456 
_cell.length_b            111.456 
_cell.length_c            151.419 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4J1X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,D,E,F,G,H,K,L 1 1,2 
C,I,J,M 2 1,3,4,5 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 222.912 111.456 0 
3 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 111.456 111.456 0 
4 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
5 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 111.456 111.456 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 137 A HIS 138 1_555 D FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? 
metalc ? metalc2 A OE1 GLU 141 A GLU 142 1_555 D FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc3 A NE2 HIS 179 A HIS 180 1_555 D FE FE2 . A FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc4 D FE FE2 . A FE2 201 1_555 E O2 1JJ . A 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? 
metalc ? metalc5 D FE FE2 . A FE2 201 1_555 E O3 1JJ . A 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc6 B NE2 HIS 137 B HIS 138 1_555 G FE FE2 . B FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc7 B OE1 GLU 141 B GLU 142 1_555 G FE FE2 . B FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc8 B NE2 HIS 179 B HIS 180 1_555 G FE FE2 . B FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? 
metalc ? metalc9 G FE FE2 . B FE2 201 1_555 H O2 1JJ . B 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc10 G FE FE2 . B FE2 201 1_555 H O3 1JJ . B 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? 
metalc ? metalc11 C NE2 HIS 137 C HIS 138 1_555 I FE FE2 . C FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc12 C OE1 GLU 141 C GLU 142 1_555 I FE FE2 . C FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc13 C NE2 HIS 179 C HIS 180 1_555 I FE FE2 . C FE2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc14 I FE FE2 . C FE2 201 1_555 J O2 1JJ . C 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.736 ? 
metalc ? metalc15 I FE FE2 . C FE2 201 1_555 J O3 1JJ . C 1JJ 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? 
#
_chem_comp.formula           'C3 H9 O4 P' 
_chem_comp.formula_weight    140.075 
_chem_comp.id                1JJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(1S)-1-hydroxypropyl]phosphonic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 P1 1JJ doub 1 n n 
O4 P1 1JJ sing 2 n n 
P1 O1 1JJ sing 3 n n 
P1 C1 1JJ sing 4 n n 
O3 C1 1JJ sing 5 n n 
C1 C2 1JJ sing 6 n n 
C2 C3 1JJ sing 7 n n 
C1 H1 1JJ sing 8 n n 
C2 H2 1JJ sing 9 n n 
C2 H3 1JJ sing 10 n n 
C3 H4 1JJ sing 11 n n 
C3 H5 1JJ sing 12 n n 
C3 H6 1JJ sing 13 n n 
O1 H7 1JJ sing 14 n n 
O3 H8 1JJ sing 15 n n 
O4 H9 1JJ sing 16 n n 
#
_atom_sites.entry_id                     4J1X 
_atom_sites.fract_transf_matrix[1][1]    0.008972 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008972 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006604 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 FE2 A 1 201 201 FE2 FE2 . 
E 3 1JJ A 1 202 1 1JJ SOH . 
F 4 GOL A 1 203 1 GOL GOL . 
G 2 FE2 B 1 201 202 FE2 FE2 . 
H 3 1JJ B 1 202 2 1JJ SOH . 
I 2 FE2 C 1 201 203 FE2 FE2 . 
J 3 1JJ C 1 202 3 1JJ SOH . 
K 5 HOH A 1 301 2 HOH HOH . 
K 5 HOH A 2 302 14 HOH HOH . 
K 5 HOH A 3 303 16 HOH HOH . 
K 5 HOH A 4 304 21 HOH HOH . 
K 5 HOH A 5 305 35 HOH HOH . 
K 5 HOH A 6 306 36 HOH HOH . 
K 5 HOH A 7 307 37 HOH HOH . 
K 5 HOH A 8 308 38 HOH HOH . 
K 5 HOH A 9 309 40 HOH HOH . 
K 5 HOH A 10 310 53 HOH HOH . 
K 5 HOH A 11 311 54 HOH HOH . 
L 5 HOH B 1 301 6 HOH HOH . 
L 5 HOH B 2 302 19 HOH HOH . 
L 5 HOH B 3 303 29 HOH HOH . 
L 5 HOH B 4 304 31 HOH HOH . 
L 5 HOH B 5 305 34 HOH HOH . 
L 5 HOH B 6 306 41 HOH HOH . 
L 5 HOH B 7 307 42 HOH HOH . 
L 5 HOH B 8 308 49 HOH HOH . 
L 5 HOH B 9 309 51 HOH HOH . 
L 5 HOH B 10 310 52 HOH HOH . 
M 5 HOH C 1 301 1 HOH HOH . 
M 5 HOH C 2 302 5 HOH HOH . 
M 5 HOH C 3 303 7 HOH HOH . 
M 5 HOH C 4 304 11 HOH HOH . 
M 5 HOH C 5 305 27 HOH HOH . 
M 5 HOH C 6 306 32 HOH HOH . 
M 5 HOH C 7 307 43 HOH HOH . 
M 5 HOH C 8 308 44 HOH HOH . 
M 5 HOH C 9 309 45 HOH HOH . 
M 5 HOH C 10 310 46 HOH HOH . 
M 5 HOH C 11 311 47 HOH HOH . 
M 5 HOH C 12 312 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 1JJ . . . J 3 76.744 66.983 -10.612 1 53.77 ? C1 1JJ 202 C 1 
HETATM 2 C C2 1JJ . . . J 3 77.353 68.167 -11.336 1 50.82 ? C2 1JJ 202 C 1 
HETATM 3 C C3 1JJ . . . J 3 77.465 69.39 -10.415 1 50.36 ? C3 1JJ 202 C 1 
HETATM 4 O O1 1JJ . . . J 3 77.105 65.694 -13.127 1 53.33 ? O1 1JJ 202 C 1 
HETATM 5 O O2 1JJ . . . J 3 75.038 64.991 -11.664 1 51.68 ? O2 1JJ 202 C 1 
HETATM 6 P P1 1JJ . . . J 3 76.58 65.431 -11.635 1 52.95 ? P1 1JJ 202 C 1 
HETATM 7 O O3 1JJ . . . J 3 75.436 67.336 -10.18 1 56.89 ? O3 1JJ 202 C 1 
HETATM 8 O O4 1JJ . . . J 3 77.46 64.288 -10.958 1 52.18 ? O4 1JJ 202 C 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           8 
#