data_4J2W # _model_server_result.job_id yuj6bmfkGNNIvk9bRnt9AA _model_server_result.datetime_utc '2024-11-24 09:18:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j2w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4J2W # _exptl.entry_id 4J2W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.61 _cell.angle_gamma 90 _cell.entry_id 4J2W _cell.length_a 59.13 _cell.length_b 99.4 _cell.length_c 85.36 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J2W _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 4J2W _atom_sites.fract_transf_matrix[1][1] 0.016912 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004725 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012164 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 401 1050 FAD FAD . D 2 FAD B 1 401 1050 FAD FAD . E 3 HOH A 1 501 2 HOH HOH . E 3 HOH A 2 502 4 HOH HOH . E 3 HOH A 3 503 8 HOH HOH . E 3 HOH A 4 504 12 HOH HOH . E 3 HOH A 5 505 14 HOH HOH . E 3 HOH A 6 506 15 HOH HOH . E 3 HOH A 7 507 16 HOH HOH . E 3 HOH A 8 508 17 HOH HOH . E 3 HOH A 9 509 18 HOH HOH . E 3 HOH A 10 510 19 HOH HOH . E 3 HOH A 11 511 23 HOH HOH . E 3 HOH A 12 512 27 HOH HOH . E 3 HOH A 13 513 32 HOH HOH . E 3 HOH A 14 514 34 HOH HOH . E 3 HOH A 15 515 36 HOH HOH . E 3 HOH A 16 516 38 HOH HOH . E 3 HOH A 17 517 39 HOH HOH . E 3 HOH A 18 518 42 HOH HOH . E 3 HOH A 19 519 43 HOH HOH . E 3 HOH A 20 520 44 HOH HOH . E 3 HOH A 21 521 47 HOH HOH . E 3 HOH A 22 522 48 HOH HOH . E 3 HOH A 23 523 52 HOH HOH . E 3 HOH A 24 524 54 HOH HOH . E 3 HOH A 25 525 56 HOH HOH . E 3 HOH A 26 526 59 HOH HOH . E 3 HOH A 27 527 60 HOH HOH . E 3 HOH A 28 528 61 HOH HOH . E 3 HOH A 29 529 63 HOH HOH . E 3 HOH A 30 530 64 HOH HOH . E 3 HOH A 31 531 65 HOH HOH . E 3 HOH A 32 532 72 HOH HOH . E 3 HOH A 33 533 75 HOH HOH . E 3 HOH A 34 534 78 HOH HOH . E 3 HOH A 35 535 81 HOH HOH . E 3 HOH A 36 536 82 HOH HOH . E 3 HOH A 37 537 84 HOH HOH . E 3 HOH A 38 538 85 HOH HOH . E 3 HOH A 39 539 86 HOH HOH . E 3 HOH A 40 540 87 HOH HOH . E 3 HOH A 41 541 88 HOH HOH . E 3 HOH A 42 542 92 HOH HOH . E 3 HOH A 43 543 93 HOH HOH . E 3 HOH A 44 544 94 HOH HOH . E 3 HOH A 45 545 95 HOH HOH . E 3 HOH A 46 546 101 HOH HOH . E 3 HOH A 47 547 103 HOH HOH . E 3 HOH A 48 548 107 HOH HOH . F 3 HOH B 1 501 1 HOH HOH . F 3 HOH B 2 502 3 HOH HOH . F 3 HOH B 3 503 5 HOH HOH . F 3 HOH B 4 504 6 HOH HOH . F 3 HOH B 5 505 7 HOH HOH . F 3 HOH B 6 506 9 HOH HOH . F 3 HOH B 7 507 10 HOH HOH . F 3 HOH B 8 508 11 HOH HOH . F 3 HOH B 9 509 13 HOH HOH . F 3 HOH B 10 510 20 HOH HOH . F 3 HOH B 11 511 21 HOH HOH . F 3 HOH B 12 512 22 HOH HOH . F 3 HOH B 13 513 24 HOH HOH . F 3 HOH B 14 514 25 HOH HOH . F 3 HOH B 15 515 26 HOH HOH . F 3 HOH B 16 516 28 HOH HOH . F 3 HOH B 17 517 29 HOH HOH . F 3 HOH B 18 518 30 HOH HOH . F 3 HOH B 19 519 31 HOH HOH . F 3 HOH B 20 520 33 HOH HOH . F 3 HOH B 21 521 35 HOH HOH . F 3 HOH B 22 522 37 HOH HOH . F 3 HOH B 23 523 40 HOH HOH . F 3 HOH B 24 524 41 HOH HOH . F 3 HOH B 25 525 45 HOH HOH . F 3 HOH B 26 526 46 HOH HOH . F 3 HOH B 27 527 49 HOH HOH . F 3 HOH B 28 528 50 HOH HOH . F 3 HOH B 29 529 51 HOH HOH . F 3 HOH B 30 530 53 HOH HOH . F 3 HOH B 31 531 55 HOH HOH . F 3 HOH B 32 532 57 HOH HOH . F 3 HOH B 33 533 58 HOH HOH . F 3 HOH B 34 534 62 HOH HOH . F 3 HOH B 35 535 66 HOH HOH . F 3 HOH B 36 536 67 HOH HOH . F 3 HOH B 37 537 68 HOH HOH . F 3 HOH B 38 538 69 HOH HOH . F 3 HOH B 39 539 70 HOH HOH . F 3 HOH B 40 540 71 HOH HOH . F 3 HOH B 41 541 73 HOH HOH . F 3 HOH B 42 542 74 HOH HOH . F 3 HOH B 43 543 76 HOH HOH . F 3 HOH B 44 544 77 HOH HOH . F 3 HOH B 45 545 79 HOH HOH . F 3 HOH B 46 546 80 HOH HOH . F 3 HOH B 47 547 83 HOH HOH . F 3 HOH B 48 548 89 HOH HOH . F 3 HOH B 49 549 90 HOH HOH . F 3 HOH B 50 550 91 HOH HOH . F 3 HOH B 51 551 96 HOH HOH . F 3 HOH B 52 552 97 HOH HOH . F 3 HOH B 53 553 98 HOH HOH . F 3 HOH B 54 554 99 HOH HOH . F 3 HOH B 55 555 100 HOH HOH . F 3 HOH B 56 556 102 HOH HOH . F 3 HOH B 57 557 104 HOH HOH . F 3 HOH B 58 558 105 HOH HOH . F 3 HOH B 59 559 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 42.56 6.251 -1.078 1 6.29 ? PA FAD 401 A 1 HETATM 2 O O1A FAD . . . C 2 42.509 6.246 0.42 1 10.49 ? O1A FAD 401 A 1 HETATM 3 O O2A FAD . . . C 2 43.323 7.421 -1.655 1 8.36 ? O2A FAD 401 A 1 HETATM 4 O O5B FAD . . . C 2 43.182 4.851 -1.517 1 10.86 ? O5B FAD 401 A 1 HETATM 5 C C5B FAD . . . C 2 43.431 4.634 -2.892 1 14.36 ? C5B FAD 401 A 1 HETATM 6 C C4B FAD . . . C 2 44.617 3.688 -3.04 1 14.53 ? C4B FAD 401 A 1 HETATM 7 O O4B FAD . . . C 2 44.998 3.574 -4.386 1 12.68 ? O4B FAD 401 A 1 HETATM 8 C C3B FAD . . . C 2 45.836 4.198 -2.302 1 17.29 ? C3B FAD 401 A 1 HETATM 9 O O3B FAD . . . C 2 46.184 3.239 -1.328 1 19.56 ? O3B FAD 401 A 1 HETATM 10 C C2B FAD . . . C 2 46.901 4.36 -3.37 1 17.26 ? C2B FAD 401 A 1 HETATM 11 O O2B FAD . . . C 2 48.167 3.942 -2.912 1 23.49 ? O2B FAD 401 A 1 HETATM 12 C C1B FAD . . . C 2 46.394 3.468 -4.467 1 13.13 ? C1B FAD 401 A 1 HETATM 13 N N9A FAD . . . C 2 46.773 3.9 -5.817 1 21.36 ? N9A FAD 401 A 1 HETATM 14 C C8A FAD . . . C 2 46.755 5.171 -6.334 1 21.61 ? C8A FAD 401 A 1 HETATM 15 N N7A FAD . . . C 2 47.144 5.113 -7.624 1 18.99 ? N7A FAD 401 A 1 HETATM 16 C C5A FAD . . . C 2 47.416 3.819 -7.938 1 22.89 ? C5A FAD 401 A 1 HETATM 17 C C6A FAD . . . C 2 47.849 3.192 -9.108 1 26 ? C6A FAD 401 A 1 HETATM 18 N N6A FAD . . . C 2 47.64 3.776 -10.293 1 25.24 ? N6A FAD 401 A 1 HETATM 19 N N1A FAD . . . C 2 48.024 1.825 -9.097 1 26.3 ? N1A FAD 401 A 1 HETATM 20 C C2A FAD . . . C 2 47.778 1.08 -7.967 1 23.36 ? C2A FAD 401 A 1 HETATM 21 N N3A FAD . . . C 2 47.348 1.708 -6.827 1 23.21 ? N3A FAD 401 A 1 HETATM 22 C C4A FAD . . . C 2 47.171 3.051 -6.812 1 21.26 ? C4A FAD 401 A 1 HETATM 23 N N1 FAD . . . C 2 35.9 10.315 5.401 1 6.14 ? N1 FAD 401 A 1 HETATM 24 C C2 FAD . . . C 2 34.884 9.86 6.212 1 9.99 ? C2 FAD 401 A 1 HETATM 25 O O2 FAD . . . C 2 33.915 9.267 5.747 1 14.8 ? O2 FAD 401 A 1 HETATM 26 N N3 FAD . . . C 2 34.93 10.05 7.572 1 12.62 ? N3 FAD 401 A 1 HETATM 27 C C4 FAD . . . C 2 36.003 10.703 8.139 1 12.54 ? C4 FAD 401 A 1 HETATM 28 O O4 FAD . . . C 2 36.026 10.877 9.349 1 12.66 ? O4 FAD 401 A 1 HETATM 29 C C4X FAD . . . C 2 37.03 11.173 7.331 1 12.92 ? C4X FAD 401 A 1 HETATM 30 N N5 FAD . . . C 2 38.094 11.819 7.898 1 11.2 ? N5 FAD 401 A 1 HETATM 31 C C5X FAD . . . C 2 39.114 12.303 7.095 1 18.1 ? C5X FAD 401 A 1 HETATM 32 C C6 FAD . . . C 2 40.192 12.975 7.689 1 15.62 ? C6 FAD 401 A 1 HETATM 33 C C7 FAD . . . C 2 41.231 13.456 6.891 1 19.84 ? C7 FAD 401 A 1 HETATM 34 C C7M FAD . . . C 2 42.377 14.167 7.549 1 12.46 ? C7M FAD 401 A 1 HETATM 35 C C8 FAD . . . C 2 41.195 13.273 5.493 1 14.56 ? C8 FAD 401 A 1 HETATM 36 C C8M FAD . . . C 2 42.319 13.788 4.642 1 11.21 ? C8M FAD 401 A 1 HETATM 37 C C9 FAD . . . C 2 40.121 12.6 4.902 1 8.26 ? C9 FAD 401 A 1 HETATM 38 C C9A FAD . . . C 2 39.074 12.121 5.703 1 12.35 ? C9A FAD 401 A 1 HETATM 39 N N10 FAD . . . C 2 38 11.446 5.139 1 12.25 ? N10 FAD 401 A 1 HETATM 40 C C10 FAD . . . C 2 36.976 10.978 5.947 1 12.36 ? C10 FAD 401 A 1 HETATM 41 C C1' FAD . . . C 2 37.953 11.2 3.659 1 9.9 ? C1' FAD 401 A 1 HETATM 42 C C2' FAD . . . C 2 38.498 9.78 3.439 1 8.65 ? C2' FAD 401 A 1 HETATM 43 O O2' FAD . . . C 2 39.755 9.631 4.057 1 10.23 ? O2' FAD 401 A 1 HETATM 44 C C3' FAD . . . C 2 38.696 9.368 1.981 1 10.2 ? C3' FAD 401 A 1 HETATM 45 O O3' FAD . . . C 2 37.587 9.736 1.169 1 6.68 ? O3' FAD 401 A 1 HETATM 46 C C4' FAD . . . C 2 38.916 7.848 1.85 1 11.87 ? C4' FAD 401 A 1 HETATM 47 O O4' FAD . . . C 2 40.072 7.337 2.507 1 8.03 ? O4' FAD 401 A 1 HETATM 48 C C5' FAD . . . C 2 38.955 7.505 0.366 1 8.83 ? C5' FAD 401 A 1 HETATM 49 O O5' FAD . . . C 2 39.556 6.245 0.247 1 10.11 ? O5' FAD 401 A 1 HETATM 50 P P FAD . . . C 2 39.772 5.589 -1.204 1 7.58 ? P FAD 401 A 1 HETATM 51 O O1P FAD . . . C 2 39.921 4.103 -0.958 1 7.43 ? O1P FAD 401 A 1 HETATM 52 O O2P FAD . . . C 2 38.636 5.96 -2.142 1 5.65 ? O2P FAD 401 A 1 HETATM 53 O O3P FAD . . . C 2 41.111 6.266 -1.767 1 6.17 ? O3P FAD 401 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 53 #