data_4J4B # _model_server_result.job_id '_NxbutJ7TC3pX1znNKtLxw' _model_server_result.datetime_utc '2025-01-11 10:42:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j4b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":903}' # _entry.id 4J4B # _exptl.entry_id 4J4B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4J4B _cell.length_a 48.383 _cell.length_b 142.44 _cell.length_c 167.305 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J4B _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 A,B,C,D,E,F,G,H,I,J,K,L 3 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_454 -x-1,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 -48.383 0 -83.6525 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 206 A CYS 206 1_555 B SG CYS 206 B CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc1 A OE1 GLU 202 A GLU 202 1_555 D NA NA . A NA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc2 A OE2 GLU 202 A GLU 202 1_555 D NA NA . A NA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.119 ? metalc ? metalc3 A O THR 204 A THR 204 1_555 D NA NA . A NA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc4 A O CYS 206 A CYS 206 1_555 D NA NA . A NA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc5 A O GLU 245 A GLU 245 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc6 C O7N NAI . A NAI 901 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc7 D NA NA . A NA 902 1_555 K O HOH . A HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.953 ? metalc ? metalc8 B O THR 204 B THR 204 1_555 I NA NA . B NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc9 B O CYS 206 B CYS 206 1_555 I NA NA . B NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc10 B O PRO 227 B PRO 227 1_555 I NA NA . B NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc11 B OE2 GLU 245 B GLU 245 1_555 J MG MG . B MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.863 ? metalc ? metalc12 H O7N NAI . B NAI 302 1_555 J MG MG . B MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc13 I NA NA . B NA 303 1_555 L O HOH . B HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.011 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4J4B _atom_sites.fract_transf_matrix[1][1] 0.020668 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00702 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005977 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAI A 1 901 901 NAI NAI . D 3 NA A 1 902 903 NA NA . E 4 MG A 1 903 904 MG MG . F 5 0TF A 1 904 902 0TF LIG . G 5 0TF B 1 301 902 0TF LIG . H 2 NAI B 1 302 901 NAI NAI . I 3 NA B 1 303 903 NA NA . J 4 MG B 1 304 904 MG MG . K 6 HOH A 1 1001 12 HOH HOH . K 6 HOH A 2 1002 14 HOH HOH . K 6 HOH A 3 1003 21 HOH HOH . K 6 HOH A 4 1004 22 HOH HOH . K 6 HOH A 5 1005 25 HOH HOH . K 6 HOH A 6 1006 35 HOH HOH . K 6 HOH A 7 1007 36 HOH HOH . K 6 HOH A 8 1008 59 HOH HOH . K 6 HOH A 9 1009 60 HOH HOH . K 6 HOH A 10 1010 63 HOH HOH . K 6 HOH A 11 1011 65 HOH HOH . K 6 HOH A 12 1012 66 HOH HOH . K 6 HOH A 13 1013 71 HOH HOH . K 6 HOH A 14 1014 73 HOH HOH . K 6 HOH A 15 1015 74 HOH HOH . K 6 HOH A 16 1016 78 HOH HOH . K 6 HOH A 17 1017 81 HOH HOH . K 6 HOH A 18 1018 82 HOH HOH . K 6 HOH A 19 1019 86 HOH HOH . K 6 HOH A 20 1020 88 HOH HOH . K 6 HOH A 21 1021 89 HOH HOH . K 6 HOH A 22 1022 98 HOH HOH . K 6 HOH A 23 1023 101 HOH HOH . K 6 HOH A 24 1024 113 HOH HOH . K 6 HOH A 25 1025 114 HOH HOH . K 6 HOH A 26 1026 116 HOH HOH . K 6 HOH A 27 1027 120 HOH HOH . K 6 HOH A 28 1028 125 HOH HOH . K 6 HOH A 29 1029 127 HOH HOH . K 6 HOH A 30 1030 130 HOH HOH . K 6 HOH A 31 1031 141 HOH HOH . K 6 HOH A 32 1032 150 HOH HOH . K 6 HOH A 33 1033 154 HOH HOH . K 6 HOH A 34 1034 158 HOH HOH . K 6 HOH A 35 1035 166 HOH HOH . K 6 HOH A 36 1036 168 HOH HOH . K 6 HOH A 37 1037 170 HOH HOH . K 6 HOH A 38 1038 172 HOH HOH . K 6 HOH A 39 1039 175 HOH HOH . K 6 HOH A 40 1040 181 HOH HOH . K 6 HOH A 41 1041 189 HOH HOH . K 6 HOH A 42 1042 191 HOH HOH . K 6 HOH A 43 1043 193 HOH HOH . K 6 HOH A 44 1044 195 HOH HOH . K 6 HOH A 45 1045 196 HOH HOH . K 6 HOH A 46 1046 202 HOH HOH . L 6 HOH B 1 401 1 HOH HOH . L 6 HOH B 2 402 2 HOH HOH . L 6 HOH B 3 403 3 HOH HOH . L 6 HOH B 4 404 4 HOH HOH . L 6 HOH B 5 405 5 HOH HOH . L 6 HOH B 6 406 6 HOH HOH . L 6 HOH B 7 407 7 HOH HOH . L 6 HOH B 8 408 8 HOH HOH . L 6 HOH B 9 409 9 HOH HOH . L 6 HOH B 10 410 10 HOH HOH . L 6 HOH B 11 411 11 HOH HOH . L 6 HOH B 12 412 13 HOH HOH . L 6 HOH B 13 413 15 HOH HOH . L 6 HOH B 14 414 16 HOH HOH . L 6 HOH B 15 415 17 HOH HOH . L 6 HOH B 16 416 18 HOH HOH . L 6 HOH B 17 417 19 HOH HOH . L 6 HOH B 18 418 20 HOH HOH . L 6 HOH B 19 419 23 HOH HOH . L 6 HOH B 20 420 24 HOH HOH . L 6 HOH B 21 421 26 HOH HOH . L 6 HOH B 22 422 27 HOH HOH . L 6 HOH B 23 423 28 HOH HOH . L 6 HOH B 24 424 29 HOH HOH . L 6 HOH B 25 425 30 HOH HOH . L 6 HOH B 26 426 31 HOH HOH . L 6 HOH B 27 427 32 HOH HOH . L 6 HOH B 28 428 33 HOH HOH . L 6 HOH B 29 429 34 HOH HOH . L 6 HOH B 30 430 37 HOH HOH . L 6 HOH B 31 431 38 HOH HOH . L 6 HOH B 32 432 39 HOH HOH . L 6 HOH B 33 433 40 HOH HOH . L 6 HOH B 34 434 41 HOH HOH . L 6 HOH B 35 435 42 HOH HOH . L 6 HOH B 36 436 43 HOH HOH . L 6 HOH B 37 437 44 HOH HOH . L 6 HOH B 38 438 45 HOH HOH . L 6 HOH B 39 439 46 HOH HOH . L 6 HOH B 40 440 47 HOH HOH . L 6 HOH B 41 441 48 HOH HOH . L 6 HOH B 42 442 49 HOH HOH . L 6 HOH B 43 443 50 HOH HOH . L 6 HOH B 44 444 51 HOH HOH . L 6 HOH B 45 445 52 HOH HOH . L 6 HOH B 46 446 53 HOH HOH . L 6 HOH B 47 447 54 HOH HOH . L 6 HOH B 48 448 55 HOH HOH . L 6 HOH B 49 449 56 HOH HOH . L 6 HOH B 50 450 57 HOH HOH . L 6 HOH B 51 451 58 HOH HOH . L 6 HOH B 52 452 61 HOH HOH . L 6 HOH B 53 453 62 HOH HOH . L 6 HOH B 54 454 64 HOH HOH . L 6 HOH B 55 455 67 HOH HOH . L 6 HOH B 56 456 68 HOH HOH . L 6 HOH B 57 457 69 HOH HOH . L 6 HOH B 58 458 70 HOH HOH . L 6 HOH B 59 459 72 HOH HOH . L 6 HOH B 60 460 75 HOH HOH . L 6 HOH B 61 461 76 HOH HOH . L 6 HOH B 62 462 77 HOH HOH . L 6 HOH B 63 463 79 HOH HOH . L 6 HOH B 64 464 80 HOH HOH . L 6 HOH B 65 465 83 HOH HOH . L 6 HOH B 66 466 84 HOH HOH . L 6 HOH B 67 467 85 HOH HOH . L 6 HOH B 68 468 87 HOH HOH . L 6 HOH B 69 469 90 HOH HOH . L 6 HOH B 70 470 91 HOH HOH . L 6 HOH B 71 471 92 HOH HOH . L 6 HOH B 72 472 93 HOH HOH . L 6 HOH B 73 473 94 HOH HOH . L 6 HOH B 74 474 95 HOH HOH . L 6 HOH B 75 475 96 HOH HOH . L 6 HOH B 76 476 97 HOH HOH . L 6 HOH B 77 477 99 HOH HOH . L 6 HOH B 78 478 100 HOH HOH . L 6 HOH B 79 479 102 HOH HOH . L 6 HOH B 80 480 103 HOH HOH . L 6 HOH B 81 481 104 HOH HOH . L 6 HOH B 82 482 105 HOH HOH . L 6 HOH B 83 483 106 HOH HOH . L 6 HOH B 84 484 107 HOH HOH . L 6 HOH B 85 485 108 HOH HOH . L 6 HOH B 86 486 109 HOH HOH . L 6 HOH B 87 487 110 HOH HOH . L 6 HOH B 88 488 111 HOH HOH . L 6 HOH B 89 489 112 HOH HOH . L 6 HOH B 90 490 115 HOH HOH . L 6 HOH B 91 491 117 HOH HOH . L 6 HOH B 92 492 118 HOH HOH . L 6 HOH B 93 493 119 HOH HOH . L 6 HOH B 94 494 121 HOH HOH . L 6 HOH B 95 495 122 HOH HOH . L 6 HOH B 96 496 123 HOH HOH . L 6 HOH B 97 497 124 HOH HOH . L 6 HOH B 98 498 126 HOH HOH . L 6 HOH B 99 499 128 HOH HOH . L 6 HOH B 100 500 129 HOH HOH . L 6 HOH B 101 501 131 HOH HOH . L 6 HOH B 102 502 132 HOH HOH . L 6 HOH B 103 503 133 HOH HOH . L 6 HOH B 104 504 134 HOH HOH . L 6 HOH B 105 505 135 HOH HOH . L 6 HOH B 106 506 136 HOH HOH . L 6 HOH B 107 507 137 HOH HOH . L 6 HOH B 108 508 138 HOH HOH . L 6 HOH B 109 509 139 HOH HOH . L 6 HOH B 110 510 140 HOH HOH . L 6 HOH B 111 511 142 HOH HOH . L 6 HOH B 112 512 143 HOH HOH . L 6 HOH B 113 513 144 HOH HOH . L 6 HOH B 114 514 145 HOH HOH . L 6 HOH B 115 515 146 HOH HOH . L 6 HOH B 116 516 147 HOH HOH . L 6 HOH B 117 517 148 HOH HOH . L 6 HOH B 118 518 149 HOH HOH . L 6 HOH B 119 519 151 HOH HOH . L 6 HOH B 120 520 152 HOH HOH . L 6 HOH B 121 521 153 HOH HOH . L 6 HOH B 122 522 155 HOH HOH . L 6 HOH B 123 523 156 HOH HOH . L 6 HOH B 124 524 157 HOH HOH . L 6 HOH B 125 525 159 HOH HOH . L 6 HOH B 126 526 160 HOH HOH . L 6 HOH B 127 527 161 HOH HOH . L 6 HOH B 128 528 162 HOH HOH . L 6 HOH B 129 529 163 HOH HOH . L 6 HOH B 130 530 164 HOH HOH . L 6 HOH B 131 531 165 HOH HOH . L 6 HOH B 132 532 167 HOH HOH . L 6 HOH B 133 533 169 HOH HOH . L 6 HOH B 134 534 171 HOH HOH . L 6 HOH B 135 535 173 HOH HOH . L 6 HOH B 136 536 174 HOH HOH . L 6 HOH B 137 537 176 HOH HOH . L 6 HOH B 138 538 177 HOH HOH . L 6 HOH B 139 539 178 HOH HOH . L 6 HOH B 140 540 179 HOH HOH . L 6 HOH B 141 541 180 HOH HOH . L 6 HOH B 142 542 182 HOH HOH . L 6 HOH B 143 543 183 HOH HOH . L 6 HOH B 144 544 184 HOH HOH . L 6 HOH B 145 545 185 HOH HOH . L 6 HOH B 146 546 186 HOH HOH . L 6 HOH B 147 547 187 HOH HOH . L 6 HOH B 148 548 188 HOH HOH . L 6 HOH B 149 549 190 HOH HOH . L 6 HOH B 150 550 192 HOH HOH . L 6 HOH B 151 551 194 HOH HOH . L 6 HOH B 152 552 197 HOH HOH . L 6 HOH B 153 553 198 HOH HOH . L 6 HOH B 154 554 199 HOH HOH . L 6 HOH B 155 555 200 HOH HOH . L 6 HOH B 156 556 201 HOH HOH . L 6 HOH B 157 557 203 HOH HOH . L 6 HOH B 158 558 204 HOH HOH . L 6 HOH B 159 559 205 HOH HOH . L 6 HOH B 160 560 206 HOH HOH . L 6 HOH B 161 561 207 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -21.265 _atom_site.Cartn_y 33.533 _atom_site.Cartn_z -19.508 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 903 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #