data_4J4Z # _model_server_result.job_id sU5BvWad6YHKwJmbJEwV1w _model_server_result.datetime_utc '2025-01-25 07:40:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j4z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 4J4Z # _exptl.entry_id 4J4Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.06 _cell.angle_gamma 90 _cell.entry_id 4J4Z _cell.length_a 69.906 _cell.length_b 66.771 _cell.length_c 38.102 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J4Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_657 -x+1,y,-z+2 -1 0 0 0 1 0 0 0 -1 56.594733 0 75.032392 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 128 A VAL 128 1_555 A N MSE 129 A MSE 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C MSE 129 A MSE 129 1_555 A N PHE 130 A PHE 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 270 n n C1 C2 PEG sing 271 n n C1 H11 PEG sing 272 n n C1 H12 PEG sing 273 n n O1 HO1 PEG sing 274 n n C2 O2 PEG sing 275 n n C2 H21 PEG sing 276 n n C2 H22 PEG sing 277 n n O2 C3 PEG sing 278 n n C3 C4 PEG sing 279 n n C3 H31 PEG sing 280 n n C3 H32 PEG sing 281 n n C4 O4 PEG sing 282 n n C4 H41 PEG sing 283 n n C4 H42 PEG sing 284 n n O4 HO4 PEG sing 285 n n # _atom_sites.entry_id 4J4Z _atom_sites.fract_transf_matrix[1][1] 0.014305 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002538 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 1 SO4 SO4 . C 2 SO4 A 1 202 3 SO4 SO4 . D 3 PEG A 1 203 1 PEG PEG . E 3 PEG A 1 204 2 PEG PEG . F 3 PEG A 1 205 3 PEG PEG . G 4 EPE A 1 206 1 EPE EPE . H 5 HOH A 1 301 1 HOH HOH . H 5 HOH A 2 302 2 HOH HOH . H 5 HOH A 3 303 3 HOH HOH . H 5 HOH A 4 304 4 HOH HOH . H 5 HOH A 5 305 5 HOH HOH . H 5 HOH A 6 306 6 HOH HOH . H 5 HOH A 7 307 7 HOH HOH . H 5 HOH A 8 308 8 HOH HOH . H 5 HOH A 9 309 9 HOH HOH . H 5 HOH A 10 310 10 HOH HOH . H 5 HOH A 11 311 11 HOH HOH . H 5 HOH A 12 312 12 HOH HOH . H 5 HOH A 13 313 13 HOH HOH . H 5 HOH A 14 314 14 HOH HOH . H 5 HOH A 15 315 15 HOH HOH . H 5 HOH A 16 316 16 HOH HOH . H 5 HOH A 17 317 17 HOH HOH . H 5 HOH A 18 318 18 HOH HOH . H 5 HOH A 19 319 19 HOH HOH . H 5 HOH A 20 320 20 HOH HOH . H 5 HOH A 21 321 21 HOH HOH . H 5 HOH A 22 322 22 HOH HOH . H 5 HOH A 23 323 23 HOH HOH . H 5 HOH A 24 324 24 HOH HOH . H 5 HOH A 25 325 25 HOH HOH . H 5 HOH A 26 326 27 HOH HOH . H 5 HOH A 27 327 28 HOH HOH . H 5 HOH A 28 328 29 HOH HOH . H 5 HOH A 29 329 30 HOH HOH . H 5 HOH A 30 330 31 HOH HOH . H 5 HOH A 31 331 32 HOH HOH . H 5 HOH A 32 332 33 HOH HOH . H 5 HOH A 33 333 34 HOH HOH . H 5 HOH A 34 334 35 HOH HOH . H 5 HOH A 35 335 36 HOH HOH . H 5 HOH A 36 336 37 HOH HOH . H 5 HOH A 37 337 38 HOH HOH . H 5 HOH A 38 338 39 HOH HOH . H 5 HOH A 39 339 40 HOH HOH . H 5 HOH A 40 340 41 HOH HOH . H 5 HOH A 41 341 42 HOH HOH . H 5 HOH A 42 342 43 HOH HOH . H 5 HOH A 43 343 44 HOH HOH . H 5 HOH A 44 344 45 HOH HOH . H 5 HOH A 45 345 46 HOH HOH . H 5 HOH A 46 346 47 HOH HOH . H 5 HOH A 47 347 48 HOH HOH . H 5 HOH A 48 348 49 HOH HOH . H 5 HOH A 49 349 50 HOH HOH . H 5 HOH A 50 350 51 HOH HOH . H 5 HOH A 51 351 52 HOH HOH . H 5 HOH A 52 352 53 HOH HOH . H 5 HOH A 53 353 54 HOH HOH . H 5 HOH A 54 354 55 HOH HOH . H 5 HOH A 55 355 56 HOH HOH . H 5 HOH A 56 356 57 HOH HOH . H 5 HOH A 57 357 58 HOH HOH . H 5 HOH A 58 358 59 HOH HOH . H 5 HOH A 59 359 60 HOH HOH . H 5 HOH A 60 360 61 HOH HOH . H 5 HOH A 61 361 62 HOH HOH . H 5 HOH A 62 362 63 HOH HOH . H 5 HOH A 63 363 64 HOH HOH . H 5 HOH A 64 364 65 HOH HOH . H 5 HOH A 65 365 66 HOH HOH . H 5 HOH A 66 366 67 HOH HOH . H 5 HOH A 67 367 68 HOH HOH . H 5 HOH A 68 368 69 HOH HOH . H 5 HOH A 69 369 70 HOH HOH . H 5 HOH A 70 370 71 HOH HOH . H 5 HOH A 71 371 72 HOH HOH . H 5 HOH A 72 372 73 HOH HOH . H 5 HOH A 73 373 74 HOH HOH . H 5 HOH A 74 374 75 HOH HOH . H 5 HOH A 75 375 76 HOH HOH . H 5 HOH A 76 376 77 HOH HOH . H 5 HOH A 77 377 78 HOH HOH . H 5 HOH A 78 378 79 HOH HOH . H 5 HOH A 79 379 80 HOH HOH . H 5 HOH A 80 380 81 HOH HOH . H 5 HOH A 81 381 82 HOH HOH . H 5 HOH A 82 382 83 HOH HOH . H 5 HOH A 83 383 84 HOH HOH . H 5 HOH A 84 384 85 HOH HOH . H 5 HOH A 85 385 86 HOH HOH . H 5 HOH A 86 386 87 HOH HOH . H 5 HOH A 87 387 88 HOH HOH . H 5 HOH A 88 388 89 HOH HOH . H 5 HOH A 89 389 90 HOH HOH . H 5 HOH A 90 390 91 HOH HOH . H 5 HOH A 91 391 92 HOH HOH . H 5 HOH A 92 392 93 HOH HOH . H 5 HOH A 93 393 94 HOH HOH . H 5 HOH A 94 394 95 HOH HOH . H 5 HOH A 95 395 96 HOH HOH . H 5 HOH A 96 396 97 HOH HOH . H 5 HOH A 97 397 98 HOH HOH . H 5 HOH A 98 398 99 HOH HOH . H 5 HOH A 99 399 100 HOH HOH . H 5 HOH A 100 400 101 HOH HOH . H 5 HOH A 101 401 102 HOH HOH . H 5 HOH A 102 402 103 HOH HOH . H 5 HOH A 103 403 104 HOH HOH . H 5 HOH A 104 404 105 HOH HOH . H 5 HOH A 105 405 106 HOH HOH . H 5 HOH A 106 406 107 HOH HOH . H 5 HOH A 107 407 108 HOH HOH . H 5 HOH A 108 408 109 HOH HOH . H 5 HOH A 109 409 110 HOH HOH . H 5 HOH A 110 410 111 HOH HOH . H 5 HOH A 111 411 112 HOH HOH . H 5 HOH A 112 412 113 HOH HOH . H 5 HOH A 113 413 114 HOH HOH . H 5 HOH A 114 414 115 HOH HOH . H 5 HOH A 115 415 116 HOH HOH . H 5 HOH A 116 416 117 HOH HOH . H 5 HOH A 117 417 118 HOH HOH . H 5 HOH A 118 418 119 HOH HOH . H 5 HOH A 119 419 120 HOH HOH . H 5 HOH A 120 420 121 HOH HOH . H 5 HOH A 121 421 122 HOH HOH . H 5 HOH A 122 422 123 HOH HOH . H 5 HOH A 123 423 124 HOH HOH . H 5 HOH A 124 424 125 HOH HOH . H 5 HOH A 125 425 126 HOH HOH . H 5 HOH A 126 426 127 HOH HOH . H 5 HOH A 127 427 128 HOH HOH . H 5 HOH A 128 428 129 HOH HOH . H 5 HOH A 129 429 130 HOH HOH . H 5 HOH A 130 430 131 HOH HOH . H 5 HOH A 131 431 132 HOH HOH . H 5 HOH A 132 432 133 HOH HOH . H 5 HOH A 133 433 134 HOH HOH . H 5 HOH A 134 434 135 HOH HOH . H 5 HOH A 135 435 136 HOH HOH . H 5 HOH A 136 436 137 HOH HOH . H 5 HOH A 137 437 138 HOH HOH . H 5 HOH A 138 438 139 HOH HOH . H 5 HOH A 139 439 140 HOH HOH . H 5 HOH A 140 440 141 HOH HOH . H 5 HOH A 141 441 142 HOH HOH . H 5 HOH A 142 442 143 HOH HOH . H 5 HOH A 143 443 144 HOH HOH . H 5 HOH A 144 444 145 HOH HOH . H 5 HOH A 145 445 146 HOH HOH . H 5 HOH A 146 446 147 HOH HOH . H 5 HOH A 147 447 148 HOH HOH . H 5 HOH A 148 448 149 HOH HOH . H 5 HOH A 149 449 150 HOH HOH . H 5 HOH A 150 450 151 HOH HOH . H 5 HOH A 151 451 152 HOH HOH . H 5 HOH A 152 452 153 HOH HOH . H 5 HOH A 153 453 154 HOH HOH . H 5 HOH A 154 454 155 HOH HOH . H 5 HOH A 155 455 156 HOH HOH . H 5 HOH A 156 456 157 HOH HOH . H 5 HOH A 157 457 158 HOH HOH . H 5 HOH A 158 458 159 HOH HOH . H 5 HOH A 159 459 160 HOH HOH . H 5 HOH A 160 460 161 HOH HOH . H 5 HOH A 161 461 162 HOH HOH . H 5 HOH A 162 462 163 HOH HOH . H 5 HOH A 163 463 164 HOH HOH . H 5 HOH A 164 464 165 HOH HOH . H 5 HOH A 165 465 166 HOH HOH . H 5 HOH A 166 466 167 HOH HOH . H 5 HOH A 167 467 168 HOH HOH . H 5 HOH A 168 468 169 HOH HOH . H 5 HOH A 169 469 170 HOH HOH . H 5 HOH A 170 470 171 HOH HOH . H 5 HOH A 171 471 172 HOH HOH . H 5 HOH A 172 472 173 HOH HOH . H 5 HOH A 173 473 174 HOH HOH . H 5 HOH A 174 474 175 HOH HOH . H 5 HOH A 175 475 176 HOH HOH . H 5 HOH A 176 476 177 HOH HOH . H 5 HOH A 177 477 178 HOH HOH . H 5 HOH A 178 478 179 HOH HOH . H 5 HOH A 179 479 180 HOH HOH . H 5 HOH A 180 480 181 HOH HOH . H 5 HOH A 181 481 182 HOH HOH . H 5 HOH A 182 482 183 HOH HOH . H 5 HOH A 183 483 184 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . A . F 3 14.222 55.882 43.769 0.5 23.02 ? C1 PEG 205 A 1 HETATM 2 C C1 PEG . B . F 3 14.203 55.417 43.454 0.5 24.62 ? C1 PEG 205 A 1 HETATM 3 O O1 PEG . A . F 3 14.891 56.88 44.326 0.5 30.13 ? O1 PEG 205 A 1 HETATM 4 O O1 PEG . B . F 3 14.951 56.385 43.938 0.5 13.73 ? O1 PEG 205 A 1 HETATM 5 C C2 PEG . A . F 3 12.788 55.965 44.032 0.5 30.24 ? C2 PEG 205 A 1 HETATM 6 C C2 PEG . B . F 3 12.795 55.461 43.804 0.5 29.68 ? C2 PEG 205 A 1 HETATM 7 O O2 PEG . A . F 3 12.212 54.761 43.648 0.5 31.11 ? O2 PEG 205 A 1 HETATM 8 O O2 PEG . B . F 3 12.282 54.23 43.409 0.5 29.72 ? O2 PEG 205 A 1 HETATM 9 C C3 PEG . A . F 3 11.454 54.654 42.45 0.5 26.66 ? C3 PEG 205 A 1 HETATM 10 C C3 PEG . B . F 3 12.386 53.769 42.064 0.5 23.58 ? C3 PEG 205 A 1 HETATM 11 C C4 PEG . A . F 3 12.374 54.323 41.331 0.5 21.74 ? C4 PEG 205 A 1 HETATM 12 C C4 PEG . B . F 3 11.786 54.759 41.134 0.5 24.22 ? C4 PEG 205 A 1 HETATM 13 O O4 PEG . A . F 3 12.892 53.059 41.533 0.5 16.23 ? O4 PEG 205 A 1 HETATM 14 O O4 PEG . B . F 3 10.496 55.009 41.538 0.5 26.21 ? O4 PEG 205 A 1 HETATM 15 H H11 PEG . A . F 3 14.561 55.039 44.13 0.5 27.62 ? H11 PEG 205 A 1 HETATM 16 H H11 PEG . B . F 3 14.569 54.569 43.776 0.5 29.55 ? H11 PEG 205 A 1 HETATM 17 H H12 PEG . A . F 3 14.376 55.898 42.758 0.5 27.62 ? H12 PEG 205 A 1 HETATM 18 H H12 PEG . B . F 3 14.278 55.432 42.435 0.5 29.55 ? H12 PEG 205 A 1 HETATM 19 H HO1 PEG . A . F 3 15.717 56.733 44.259 0.5 36.16 ? HO1 PEG 205 A 1 HETATM 20 H HO1 PEG . B . F 3 15.552 56.055 44.426 0.5 16.48 ? HO1 PEG 205 A 1 HETATM 21 H H21 PEG . A . F 3 12.614 56.133 45.007 0.5 36.29 ? H21 PEG 205 A 1 HETATM 22 H H21 PEG . B . F 3 12.671 55.591 44.793 0.5 35.62 ? H21 PEG 205 A 1 HETATM 23 H H22 PEG . A . F 3 12.395 56.72 43.477 0.5 36.29 ? H22 PEG 205 A 1 HETATM 24 H H22 PEG . B . F 3 12.34 56.209 43.29 0.5 35.62 ? H22 PEG 205 A 1 HETATM 25 H H31 PEG . A . F 3 10.81 53.924 42.557 0.5 31.99 ? H31 PEG 205 A 1 HETATM 26 H H31 PEG . B . F 3 11.921 52.911 41.977 0.5 28.3 ? H31 PEG 205 A 1 HETATM 27 H H32 PEG . A . F 3 10.96 55.519 42.26 0.5 31.99 ? H32 PEG 205 A 1 HETATM 28 H H32 PEG . B . F 3 13.367 53.65 41.837 0.5 28.3 ? H32 PEG 205 A 1 HETATM 29 H H41 PEG . A . F 3 13.086 54.96 41.302 0.5 26.08 ? H41 PEG 205 A 1 HETATM 30 H H41 PEG . B . F 3 12.292 55.57 41.159 0.5 29.06 ? H41 PEG 205 A 1 HETATM 31 H H42 PEG . A . F 3 11.876 54.342 40.476 0.5 26.08 ? H42 PEG 205 A 1 HETATM 32 H H42 PEG . B . F 3 11.784 54.394 40.214 0.5 29.06 ? H42 PEG 205 A 1 HETATM 33 H HO4 PEG . A . F 3 12.383 52.616 42.148 0.5 19.48 ? HO4 PEG 205 A 1 HETATM 34 H HO4 PEG . B . F 3 10.003 55.292 40.823 0.5 31.45 ? HO4 PEG 205 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 34 #