data_4J50
#
_model_server_result.job_id            QkzNCf6k20HQneNfK7z8-Q 
_model_server_result.datetime_utc      '2025-07-03 17:44:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4j50 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":101}' 
#
_entry.id    4J50 
#
_exptl.entry_id    4J50 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4J50 
_cell.length_a            46.338 
_cell.length_b            46.338 
_cell.length_c            134.597 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4J50 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA hexameric 6 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
hydrog WATSON-CRICK hydrog1 A N1 G 3 A G 3 1_555 B N3 C 19 B C 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N2 G 3 A G 3 1_555 B O2 C 19 B C 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O6 G 3 A G 3 1_555 B N4 C 19 B C 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N1 G 4 A G 4 1_555 B N3 C 18 B C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N2 G 4 A G 4 1_555 B O2 C 18 B C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A O6 G 4 A G 4 1_555 B N4 C 18 B C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_28_PAIR hydrog7 A N1 G 5 A G 5 1_555 B O2 U 17 B U 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_28_PAIR hydrog8 A O6 G 5 A G 5 1_555 B N3 U 17 B U 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A N3 C 6 A C 6 1_555 B N1 G 16 B G 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N4 C 6 A C 6 1_555 B O6 G 16 B G 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A O2 C 6 A C 6 1_555 B N2 G 16 B G 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A N3 C 7 A C 7 1_555 B N1 G 15 B G 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N4 C 7 A C 7 1_555 B O6 G 15 B G 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A O2 C 7 A C 7 1_555 B N2 G 15 B G 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'A-A MISPAIR' hydrog15 A N1 A 8 A A 8 1_555 B N6 A 14 B A 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A N1 G 9 A G 9 1_555 B N3 C 13 B C 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 A N2 G 9 A G 9 1_555 B O2 C 13 B C 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 A O6 G 9 A G 9 1_555 B N4 C 13 B C 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 A N3 C 10 A C 10 1_555 B N1 G 12 B G 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 A N4 C 10 A C 10 1_555 B O6 G 12 B G 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 A O2 C 10 A C 10 1_555 B N2 G 12 B G 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 A N1 G 12 A G 12 1_555 B N3 C 10 B C 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog23 A N2 G 12 A G 12 1_555 B O2 C 10 B C 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog24 A O6 G 12 A G 12 1_555 B N4 C 10 B C 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog25 A N3 C 13 A C 13 1_555 B N1 G 9 B G 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog26 A N4 C 13 A C 13 1_555 B O6 G 9 B G 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog27 A O2 C 13 A C 13 1_555 B N2 G 9 B G 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'A-A MISPAIR' hydrog28 A N6 A 14 A A 14 1_555 B N1 A 8 B A 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog29 A N1 G 15 A G 15 1_555 B N3 C 7 B C 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog30 A N2 G 15 A G 15 1_555 B O2 C 7 B C 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog31 A O6 G 15 A G 15 1_555 B N4 C 7 B C 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog32 A N1 G 16 A G 16 1_555 B N3 C 6 B C 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog33 A N2 G 16 A G 16 1_555 B O2 C 6 B C 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog34 A O6 G 16 A G 16 1_555 B N4 C 6 B C 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_28_PAIR hydrog35 A N3 U 17 A U 17 1_555 B O6 G 5 B G 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog TYPE_28_PAIR hydrog36 A O2 U 17 A U 17 1_555 B N1 G 5 B G 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog37 A N3 C 18 A C 18 1_555 B N1 G 4 B G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog38 A N4 C 18 A C 18 1_555 B O6 G 4 B G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog39 A O2 C 18 A C 18 1_555 B N2 G 4 B G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog40 A N3 C 19 A C 19 1_555 B N1 G 3 B G 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog41 A N4 C 19 A C 19 1_555 B O6 G 3 B G 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog42 A O2 C 19 A C 19 1_555 B N2 G 3 B G 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 118 n n 
P O2 PO4 sing 119 n n 
P O3 PO4 sing 120 n n 
P O4 PO4 sing 121 n n 
#
_atom_sites.entry_id                     4J50 
_atom_sites.fract_transf_matrix[1][1]    0.021581 
_atom_sites.fract_transf_matrix[1][2]    0.01246 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024919 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00743 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PO4 A 1 101 2 PO4 PO4 . 
D 2 PO4 B 1 101 2 PO4 PO4 . 
E 3 HOH A 1 201 4 HOH HOH . 
E 3 HOH A 2 202 7 HOH HOH . 
E 3 HOH A 3 203 13 HOH HOH . 
E 3 HOH A 4 204 14 HOH HOH . 
E 3 HOH A 5 205 17 HOH HOH . 
E 3 HOH A 6 206 19 HOH HOH . 
E 3 HOH A 7 207 21 HOH HOH . 
E 3 HOH A 8 208 23 HOH HOH . 
E 3 HOH A 9 209 24 HOH HOH . 
E 3 HOH A 10 210 26 HOH HOH . 
E 3 HOH A 11 211 27 HOH HOH . 
E 3 HOH A 12 212 32 HOH HOH . 
E 3 HOH A 13 213 33 HOH HOH . 
E 3 HOH A 14 214 36 HOH HOH . 
E 3 HOH A 15 215 40 HOH HOH . 
E 3 HOH A 16 216 42 HOH HOH . 
E 3 HOH A 17 217 44 HOH HOH . 
E 3 HOH A 18 218 49 HOH HOH . 
E 3 HOH A 19 219 50 HOH HOH . 
E 3 HOH A 20 220 51 HOH HOH . 
E 3 HOH A 21 221 53 HOH HOH . 
E 3 HOH A 22 222 54 HOH HOH . 
E 3 HOH A 23 223 56 HOH HOH . 
E 3 HOH A 24 224 57 HOH HOH . 
E 3 HOH A 25 225 58 HOH HOH . 
E 3 HOH A 26 226 59 HOH HOH . 
E 3 HOH A 27 227 60 HOH HOH . 
E 3 HOH A 28 228 63 HOH HOH . 
E 3 HOH A 29 229 66 HOH HOH . 
E 3 HOH A 30 230 68 HOH HOH . 
E 3 HOH A 31 231 71 HOH HOH . 
E 3 HOH A 32 232 74 HOH HOH . 
E 3 HOH A 33 233 75 HOH HOH . 
E 3 HOH A 34 234 76 HOH HOH . 
E 3 HOH A 35 235 77 HOH HOH . 
E 3 HOH A 36 236 80 HOH HOH . 
E 3 HOH A 37 237 81 HOH HOH . 
E 3 HOH A 38 238 83 HOH HOH . 
E 3 HOH A 39 239 84 HOH HOH . 
E 3 HOH A 40 240 85 HOH HOH . 
E 3 HOH A 41 241 86 HOH HOH . 
E 3 HOH A 42 242 88 HOH HOH . 
E 3 HOH A 43 243 90 HOH HOH . 
E 3 HOH A 44 244 91 HOH HOH . 
E 3 HOH A 45 245 92 HOH HOH . 
E 3 HOH A 46 246 95 HOH HOH . 
E 3 HOH A 47 247 96 HOH HOH . 
E 3 HOH A 48 248 98 HOH HOH . 
E 3 HOH A 49 249 104 HOH HOH . 
E 3 HOH A 50 250 105 HOH HOH . 
E 3 HOH A 51 251 106 HOH HOH . 
E 3 HOH A 52 252 107 HOH HOH . 
E 3 HOH A 53 253 108 HOH HOH . 
E 3 HOH A 54 254 109 HOH HOH . 
E 3 HOH A 55 255 111 HOH HOH . 
E 3 HOH A 56 256 112 HOH HOH . 
F 3 HOH B 1 201 1 HOH HOH . 
F 3 HOH B 2 202 2 HOH HOH . 
F 3 HOH B 3 203 3 HOH HOH . 
F 3 HOH B 4 204 5 HOH HOH . 
F 3 HOH B 5 205 6 HOH HOH . 
F 3 HOH B 6 206 8 HOH HOH . 
F 3 HOH B 7 207 9 HOH HOH . 
F 3 HOH B 8 208 10 HOH HOH . 
F 3 HOH B 9 209 11 HOH HOH . 
F 3 HOH B 10 210 12 HOH HOH . 
F 3 HOH B 11 211 15 HOH HOH . 
F 3 HOH B 12 212 16 HOH HOH . 
F 3 HOH B 13 213 18 HOH HOH . 
F 3 HOH B 14 214 20 HOH HOH . 
F 3 HOH B 15 215 22 HOH HOH . 
F 3 HOH B 16 216 25 HOH HOH . 
F 3 HOH B 17 217 28 HOH HOH . 
F 3 HOH B 18 218 29 HOH HOH . 
F 3 HOH B 19 219 30 HOH HOH . 
F 3 HOH B 20 220 31 HOH HOH . 
F 3 HOH B 21 221 34 HOH HOH . 
F 3 HOH B 22 222 35 HOH HOH . 
F 3 HOH B 23 223 37 HOH HOH . 
F 3 HOH B 24 224 38 HOH HOH . 
F 3 HOH B 25 225 39 HOH HOH . 
F 3 HOH B 26 226 41 HOH HOH . 
F 3 HOH B 27 227 43 HOH HOH . 
F 3 HOH B 28 228 45 HOH HOH . 
F 3 HOH B 29 229 46 HOH HOH . 
F 3 HOH B 30 230 47 HOH HOH . 
F 3 HOH B 31 231 48 HOH HOH . 
F 3 HOH B 32 232 52 HOH HOH . 
F 3 HOH B 33 233 55 HOH HOH . 
F 3 HOH B 34 234 61 HOH HOH . 
F 3 HOH B 35 235 62 HOH HOH . 
F 3 HOH B 36 236 64 HOH HOH . 
F 3 HOH B 37 237 65 HOH HOH . 
F 3 HOH B 38 238 67 HOH HOH . 
F 3 HOH B 39 239 69 HOH HOH . 
F 3 HOH B 40 240 70 HOH HOH . 
F 3 HOH B 41 241 72 HOH HOH . 
F 3 HOH B 42 242 73 HOH HOH . 
F 3 HOH B 43 243 78 HOH HOH . 
F 3 HOH B 44 244 79 HOH HOH . 
F 3 HOH B 45 245 82 HOH HOH . 
F 3 HOH B 46 246 87 HOH HOH . 
F 3 HOH B 47 247 89 HOH HOH . 
F 3 HOH B 48 248 93 HOH HOH . 
F 3 HOH B 49 249 94 HOH HOH . 
F 3 HOH B 50 250 97 HOH HOH . 
F 3 HOH B 51 251 99 HOH HOH . 
F 3 HOH B 52 252 100 HOH HOH . 
F 3 HOH B 53 253 101 HOH HOH . 
F 3 HOH B 54 254 102 HOH HOH . 
F 3 HOH B 55 255 103 HOH HOH . 
F 3 HOH B 56 256 110 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . D 2 -0.021 -0.106 14.063 0.44 26.08 ? P PO4 101 B 1 
HETATM 2 O O1 PO4 . . . D 2 0.382 -0.881 15.288 0 24.31 ? O1 PO4 101 B 1 
HETATM 3 O O2 PO4 . . . D 2 -0.48 -1.053 12.981 0.4 24.44 ? O2 PO4 101 B 1 
HETATM 4 O O3 PO4 . . . D 2 -1.147 0.813 14.46 0.88 23.57 ? O3 PO4 101 B 1 
HETATM 5 O O4 PO4 . . . D 2 1.159 0.699 13.577 0 24.51 ? O4 PO4 101 B 1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           5 
#