data_4J54 # _model_server_result.job_id ABaiKI417iqQTihGJOhojA _model_server_result.datetime_utc '2024-11-14 17:57:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j54 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":103}' # _entry.id 4J54 # _exptl.entry_id 4J54 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 22 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4J54 _cell.length_a 28.572 _cell.length_b 65.788 _cell.length_c 92.821 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J54 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4J54 _atom_sites.fract_transf_matrix[1][1] 0.034999 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0152 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010773 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 G52 A 1 201 201 G52 G52 . D 3 IOD A 1 202 511 IOD IOD . E 3 IOD A 1 203 515 IOD IOD . F 3 IOD A 1 204 516 IOD IOD . G 3 IOD A 1 205 517 IOD IOD . H 3 IOD A 1 206 518 IOD IOD . I 3 IOD A 1 207 519 IOD IOD . J 3 IOD A 1 208 522 IOD IOD . K 3 IOD A 1 209 523 IOD IOD . L 3 IOD A 1 210 524 IOD IOD . M 3 IOD A 1 211 525 IOD IOD . N 3 IOD A 1 212 526 IOD IOD . O 3 IOD A 1 213 527 IOD IOD . P 3 IOD A 1 214 531 IOD IOD . Q 3 IOD A 1 215 532 IOD IOD . R 4 ACT A 1 216 551 ACT ACT . S 2 G52 B 1 101 203 G52 G52 . T 3 IOD B 1 102 512 IOD IOD . U 3 IOD B 1 103 513 IOD IOD . V 3 IOD B 1 104 514 IOD IOD . W 3 IOD B 1 105 520 IOD IOD . X 3 IOD B 1 106 521 IOD IOD . Y 3 IOD B 1 107 528 IOD IOD . Z 3 IOD B 1 108 529 IOD IOD . AA 3 IOD B 1 109 530 IOD IOD . BA 5 HOH A 1 301 1002 HOH HOH . BA 5 HOH A 2 302 1003 HOH HOH . BA 5 HOH A 3 303 1004 HOH HOH . BA 5 HOH A 4 304 1009 HOH HOH . BA 5 HOH A 5 305 1010 HOH HOH . BA 5 HOH A 6 306 1011 HOH HOH . BA 5 HOH A 7 307 1013 HOH HOH . BA 5 HOH A 8 308 1016 HOH HOH . BA 5 HOH A 9 309 1017 HOH HOH . BA 5 HOH A 10 310 1020 HOH HOH . BA 5 HOH A 11 311 1022 HOH HOH . BA 5 HOH A 12 312 1024 HOH HOH . BA 5 HOH A 13 313 1027 HOH HOH . BA 5 HOH A 14 314 1028 HOH HOH . BA 5 HOH A 15 315 1029 HOH HOH . BA 5 HOH A 16 316 1030 HOH HOH . BA 5 HOH A 17 317 1031 HOH HOH . BA 5 HOH A 18 318 1032 HOH HOH . BA 5 HOH A 19 319 1033 HOH HOH . BA 5 HOH A 20 320 1035 HOH HOH . BA 5 HOH A 21 321 1036 HOH HOH . BA 5 HOH A 22 322 1039 HOH HOH . BA 5 HOH A 23 323 1041 HOH HOH . BA 5 HOH A 24 324 1042 HOH HOH . BA 5 HOH A 25 325 1043 HOH HOH . BA 5 HOH A 26 326 1045 HOH HOH . BA 5 HOH A 27 327 1046 HOH HOH . BA 5 HOH A 28 328 1049 HOH HOH . BA 5 HOH A 29 329 1051 HOH HOH . BA 5 HOH A 30 330 1052 HOH HOH . BA 5 HOH A 31 331 1053 HOH HOH . BA 5 HOH A 32 332 1057 HOH HOH . BA 5 HOH A 33 333 1058 HOH HOH . BA 5 HOH A 34 334 1060 HOH HOH . BA 5 HOH A 35 335 1062 HOH HOH . BA 5 HOH A 36 336 1065 HOH HOH . BA 5 HOH A 37 337 1069 HOH HOH . BA 5 HOH A 38 338 1075 HOH HOH . BA 5 HOH A 39 339 1076 HOH HOH . BA 5 HOH A 40 340 1078 HOH HOH . BA 5 HOH A 41 341 1079 HOH HOH . BA 5 HOH A 42 342 1081 HOH HOH . BA 5 HOH A 43 343 1083 HOH HOH . BA 5 HOH A 44 344 1087 HOH HOH . BA 5 HOH A 45 345 1088 HOH HOH . BA 5 HOH A 46 346 1086 HOH HOH . CA 5 HOH B 1 1001 1001 HOH HOH . CA 5 HOH B 2 1002 1005 HOH HOH . CA 5 HOH B 3 1003 1006 HOH HOH . CA 5 HOH B 4 1004 1007 HOH HOH . CA 5 HOH B 5 1005 1008 HOH HOH . CA 5 HOH B 6 1006 1012 HOH HOH . CA 5 HOH B 7 1007 1014 HOH HOH . CA 5 HOH B 8 1008 1015 HOH HOH . CA 5 HOH B 9 1009 1018 HOH HOH . CA 5 HOH B 10 1010 1019 HOH HOH . CA 5 HOH B 11 1011 1021 HOH HOH . CA 5 HOH B 12 1012 1023 HOH HOH . CA 5 HOH B 13 1013 1025 HOH HOH . CA 5 HOH B 14 1014 1026 HOH HOH . CA 5 HOH B 15 1015 1034 HOH HOH . CA 5 HOH B 16 1016 1037 HOH HOH . CA 5 HOH B 17 1017 1038 HOH HOH . CA 5 HOH B 18 1018 1040 HOH HOH . CA 5 HOH B 19 1019 1044 HOH HOH . CA 5 HOH B 20 1020 1047 HOH HOH . CA 5 HOH B 21 1021 1048 HOH HOH . CA 5 HOH B 22 1022 1050 HOH HOH . CA 5 HOH B 23 1023 1054 HOH HOH . CA 5 HOH B 24 1024 1055 HOH HOH . CA 5 HOH B 25 1025 1056 HOH HOH . CA 5 HOH B 26 1026 1059 HOH HOH . CA 5 HOH B 27 1027 1061 HOH HOH . CA 5 HOH B 28 1028 1063 HOH HOH . CA 5 HOH B 29 1029 1064 HOH HOH . CA 5 HOH B 30 1030 1066 HOH HOH . CA 5 HOH B 31 1031 1067 HOH HOH . CA 5 HOH B 32 1032 1068 HOH HOH . CA 5 HOH B 33 1033 1070 HOH HOH . CA 5 HOH B 34 1034 1071 HOH HOH . CA 5 HOH B 35 1035 1072 HOH HOH . CA 5 HOH B 36 1036 1073 HOH HOH . CA 5 HOH B 37 1037 1074 HOH HOH . CA 5 HOH B 38 1038 1077 HOH HOH . CA 5 HOH B 39 1039 1080 HOH HOH . CA 5 HOH B 40 1040 1082 HOH HOH . CA 5 HOH B 41 1041 1084 HOH HOH . CA 5 HOH B 42 1042 1085 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id U _atom_site.label_entity_id 3 _atom_site.Cartn_x 16.018 _atom_site.Cartn_y 5.789 _atom_site.Cartn_z 28.873 _atom_site.occupancy 0.4 _atom_site.B_iso_or_equiv 21.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 103 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #