data_4J5M # _model_server_result.job_id 6_zXjSYMcQAjKv0Ypoyv-A _model_server_result.datetime_utc '2025-02-05 18:04:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j5m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1901}' # _entry.id 4J5M # _exptl.entry_id 4J5M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4J5M _cell.length_a 69.093 _cell.length_b 78.2 _cell.length_c 151.817 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J5M _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 237 n n N O2 NO3 sing 238 n n N O3 NO3 sing 239 n n # _atom_sites.entry_id 4J5M _atom_sites.fract_transf_matrix[1][1] 0.014473 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006587 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 1901 1 NO3 NO3 . C 2 NO3 A 1 1902 2 NO3 NO3 . D 3 HOH A 1 2001 1 HOH HOH . D 3 HOH A 2 2002 2 HOH HOH . D 3 HOH A 3 2003 5 HOH HOH . D 3 HOH A 4 2004 8 HOH HOH . D 3 HOH A 5 2005 11 HOH HOH . D 3 HOH A 6 2006 13 HOH HOH . D 3 HOH A 7 2007 14 HOH HOH . D 3 HOH A 8 2008 16 HOH HOH . D 3 HOH A 9 2009 18 HOH HOH . D 3 HOH A 10 2010 19 HOH HOH . D 3 HOH A 11 2011 21 HOH HOH . D 3 HOH A 12 2012 22 HOH HOH . D 3 HOH A 13 2013 24 HOH HOH . D 3 HOH A 14 2014 25 HOH HOH . D 3 HOH A 15 2015 26 HOH HOH . D 3 HOH A 16 2016 27 HOH HOH . D 3 HOH A 17 2017 28 HOH HOH . D 3 HOH A 18 2018 29 HOH HOH . D 3 HOH A 19 2019 30 HOH HOH . D 3 HOH A 20 2020 31 HOH HOH . D 3 HOH A 21 2021 32 HOH HOH . D 3 HOH A 22 2022 33 HOH HOH . D 3 HOH A 23 2023 34 HOH HOH . D 3 HOH A 24 2024 35 HOH HOH . D 3 HOH A 25 2025 37 HOH HOH . D 3 HOH A 26 2026 38 HOH HOH . D 3 HOH A 27 2027 39 HOH HOH . D 3 HOH A 28 2028 40 HOH HOH . D 3 HOH A 29 2029 43 HOH HOH . D 3 HOH A 30 2030 44 HOH HOH . D 3 HOH A 31 2031 45 HOH HOH . D 3 HOH A 32 2032 47 HOH HOH . D 3 HOH A 33 2033 49 HOH HOH . D 3 HOH A 34 2034 50 HOH HOH . D 3 HOH A 35 2035 53 HOH HOH . D 3 HOH A 36 2036 54 HOH HOH . D 3 HOH A 37 2037 57 HOH HOH . D 3 HOH A 38 2038 58 HOH HOH . D 3 HOH A 39 2039 59 HOH HOH . D 3 HOH A 40 2040 60 HOH HOH . D 3 HOH A 41 2041 61 HOH HOH . D 3 HOH A 42 2042 62 HOH HOH . D 3 HOH A 43 2043 63 HOH HOH . D 3 HOH A 44 2044 66 HOH HOH . D 3 HOH A 45 2045 67 HOH HOH . D 3 HOH A 46 2046 68 HOH HOH . D 3 HOH A 47 2047 69 HOH HOH . D 3 HOH A 48 2048 70 HOH HOH . D 3 HOH A 49 2049 71 HOH HOH . D 3 HOH A 50 2050 72 HOH HOH . D 3 HOH A 51 2051 73 HOH HOH . D 3 HOH A 52 2052 74 HOH HOH . D 3 HOH A 53 2053 75 HOH HOH . D 3 HOH A 54 2054 76 HOH HOH . D 3 HOH A 55 2055 78 HOH HOH . D 3 HOH A 56 2056 81 HOH HOH . D 3 HOH A 57 2057 82 HOH HOH . D 3 HOH A 58 2058 83 HOH HOH . D 3 HOH A 59 2059 84 HOH HOH . D 3 HOH A 60 2060 85 HOH HOH . D 3 HOH A 61 2061 86 HOH HOH . D 3 HOH A 62 2062 88 HOH HOH . D 3 HOH A 63 2063 89 HOH HOH . D 3 HOH A 64 2064 90 HOH HOH . D 3 HOH A 65 2065 91 HOH HOH . D 3 HOH A 66 2066 96 HOH HOH . D 3 HOH A 67 2067 97 HOH HOH . D 3 HOH A 68 2068 99 HOH HOH . D 3 HOH A 69 2069 100 HOH HOH . D 3 HOH A 70 2070 102 HOH HOH . D 3 HOH A 71 2071 105 HOH HOH . D 3 HOH A 72 2072 107 HOH HOH . D 3 HOH A 73 2073 108 HOH HOH . D 3 HOH A 74 2074 109 HOH HOH . D 3 HOH A 75 2075 110 HOH HOH . D 3 HOH A 76 2076 111 HOH HOH . D 3 HOH A 77 2077 112 HOH HOH . D 3 HOH A 78 2078 113 HOH HOH . D 3 HOH A 79 2079 114 HOH HOH . D 3 HOH A 80 2080 115 HOH HOH . D 3 HOH A 81 2081 116 HOH HOH . D 3 HOH A 82 2082 117 HOH HOH . D 3 HOH A 83 2083 118 HOH HOH . D 3 HOH A 84 2084 119 HOH HOH . D 3 HOH A 85 2085 120 HOH HOH . D 3 HOH A 86 2086 121 HOH HOH . D 3 HOH A 87 2087 122 HOH HOH . D 3 HOH A 88 2088 123 HOH HOH . D 3 HOH A 89 2089 124 HOH HOH . D 3 HOH A 90 2090 125 HOH HOH . D 3 HOH A 91 2091 126 HOH HOH . D 3 HOH A 92 2092 127 HOH HOH . D 3 HOH A 93 2093 128 HOH HOH . D 3 HOH A 94 2094 130 HOH HOH . D 3 HOH A 95 2095 131 HOH HOH . D 3 HOH A 96 2096 132 HOH HOH . D 3 HOH A 97 2097 133 HOH HOH . D 3 HOH A 98 2098 134 HOH HOH . D 3 HOH A 99 2099 135 HOH HOH . D 3 HOH A 100 2100 136 HOH HOH . D 3 HOH A 101 2101 137 HOH HOH . D 3 HOH A 102 2102 138 HOH HOH . D 3 HOH A 103 2103 140 HOH HOH . D 3 HOH A 104 2104 143 HOH HOH . D 3 HOH A 105 2105 144 HOH HOH . D 3 HOH A 106 2106 147 HOH HOH . D 3 HOH A 107 2107 148 HOH HOH . D 3 HOH A 108 2108 149 HOH HOH . D 3 HOH A 109 2109 150 HOH HOH . D 3 HOH A 110 2110 151 HOH HOH . D 3 HOH A 111 2111 152 HOH HOH . D 3 HOH A 112 2112 153 HOH HOH . D 3 HOH A 113 2113 154 HOH HOH . D 3 HOH A 114 2114 155 HOH HOH . D 3 HOH A 115 2115 157 HOH HOH . D 3 HOH A 116 2116 158 HOH HOH . D 3 HOH A 117 2117 160 HOH HOH . D 3 HOH A 118 2118 162 HOH HOH . D 3 HOH A 119 2119 163 HOH HOH . D 3 HOH A 120 2120 164 HOH HOH . D 3 HOH A 121 2121 165 HOH HOH . D 3 HOH A 122 2122 166 HOH HOH . D 3 HOH A 123 2123 167 HOH HOH . D 3 HOH A 124 2124 168 HOH HOH . D 3 HOH A 125 2125 169 HOH HOH . D 3 HOH A 126 2126 170 HOH HOH . D 3 HOH A 127 2127 171 HOH HOH . D 3 HOH A 128 2128 172 HOH HOH . D 3 HOH A 129 2129 173 HOH HOH . D 3 HOH A 130 2130 174 HOH HOH . D 3 HOH A 131 2131 175 HOH HOH . D 3 HOH A 132 2132 177 HOH HOH . D 3 HOH A 133 2133 179 HOH HOH . D 3 HOH A 134 2134 180 HOH HOH . D 3 HOH A 135 2135 181 HOH HOH . D 3 HOH A 136 2136 182 HOH HOH . D 3 HOH A 137 2137 183 HOH HOH . D 3 HOH A 138 2138 184 HOH HOH . D 3 HOH A 139 2139 186 HOH HOH . D 3 HOH A 140 2140 187 HOH HOH . D 3 HOH A 141 2141 188 HOH HOH . D 3 HOH A 142 2142 189 HOH HOH . D 3 HOH A 143 2143 191 HOH HOH . D 3 HOH A 144 2144 192 HOH HOH . D 3 HOH A 145 2145 193 HOH HOH . D 3 HOH A 146 2146 194 HOH HOH . D 3 HOH A 147 2147 195 HOH HOH . D 3 HOH A 148 2148 196 HOH HOH . D 3 HOH A 149 2149 197 HOH HOH . D 3 HOH A 150 2150 198 HOH HOH . D 3 HOH A 151 2151 199 HOH HOH . D 3 HOH A 152 2152 200 HOH HOH . D 3 HOH A 153 2153 201 HOH HOH . D 3 HOH A 154 2154 203 HOH HOH . D 3 HOH A 155 2155 204 HOH HOH . D 3 HOH A 156 2156 205 HOH HOH . D 3 HOH A 157 2157 206 HOH HOH . D 3 HOH A 158 2158 207 HOH HOH . D 3 HOH A 159 2159 208 HOH HOH . D 3 HOH A 160 2160 209 HOH HOH . D 3 HOH A 161 2161 210 HOH HOH . D 3 HOH A 162 2162 212 HOH HOH . D 3 HOH A 163 2163 213 HOH HOH . D 3 HOH A 164 2164 214 HOH HOH . D 3 HOH A 165 2165 215 HOH HOH . D 3 HOH A 166 2166 216 HOH HOH . D 3 HOH A 167 2167 217 HOH HOH . D 3 HOH A 168 2168 218 HOH HOH . D 3 HOH A 169 2169 219 HOH HOH . D 3 HOH A 170 2170 220 HOH HOH . D 3 HOH A 171 2171 221 HOH HOH . D 3 HOH A 172 2172 222 HOH HOH . D 3 HOH A 173 2173 223 HOH HOH . D 3 HOH A 174 2174 224 HOH HOH . D 3 HOH A 175 2175 225 HOH HOH . D 3 HOH A 176 2176 227 HOH HOH . D 3 HOH A 177 2177 228 HOH HOH . D 3 HOH A 178 2178 229 HOH HOH . D 3 HOH A 179 2179 230 HOH HOH . D 3 HOH A 180 2180 231 HOH HOH . D 3 HOH A 181 2181 232 HOH HOH . D 3 HOH A 182 2182 233 HOH HOH . D 3 HOH A 183 2183 234 HOH HOH . D 3 HOH A 184 2184 235 HOH HOH . D 3 HOH A 185 2185 236 HOH HOH . D 3 HOH A 186 2186 237 HOH HOH . D 3 HOH A 187 2187 238 HOH HOH . D 3 HOH A 188 2188 239 HOH HOH . D 3 HOH A 189 2189 240 HOH HOH . D 3 HOH A 190 2190 242 HOH HOH . D 3 HOH A 191 2191 243 HOH HOH . D 3 HOH A 192 2192 244 HOH HOH . D 3 HOH A 193 2193 245 HOH HOH . D 3 HOH A 194 2194 246 HOH HOH . D 3 HOH A 195 2195 248 HOH HOH . D 3 HOH A 196 2196 249 HOH HOH . D 3 HOH A 197 2197 251 HOH HOH . D 3 HOH A 198 2198 252 HOH HOH . D 3 HOH A 199 2199 253 HOH HOH . D 3 HOH A 200 2200 254 HOH HOH . D 3 HOH A 201 2201 256 HOH HOH . D 3 HOH A 202 2202 257 HOH HOH . D 3 HOH A 203 2203 258 HOH HOH . D 3 HOH A 204 2204 259 HOH HOH . D 3 HOH A 205 2205 260 HOH HOH . D 3 HOH A 206 2206 261 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . B 2 34.396 49.056 43.031 1 39.83 ? N NO3 1901 A 1 HETATM 2 O O1 NO3 . . . B 2 33.21 49.126 43.768 1 45.84 ? O1 NO3 1901 A 1 HETATM 3 O O2 NO3 . . . B 2 35.071 50.246 42.741 1 43.11 ? O2 NO3 1901 A 1 HETATM 4 O O3 NO3 . . . B 2 34.898 47.817 42.595 1 36.45 ? O3 NO3 1901 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #