data_4J62 # _model_server_result.job_id CMIlpl7x1hkNZwr9K5yRXQ _model_server_result.datetime_utc '2024-12-01 15:43:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j62 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":208}' # _entry.id 4J62 # _exptl.entry_id 4J62 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 100.159 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CYCLOHEXANOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4J62 _cell.length_a 63.269 _cell.length_b 63.269 _cell.length_c 64.937 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J62 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C6 H12 O' _chem_comp.formula_weight 100.159 _chem_comp.id CXL _chem_comp.mon_nstd_flag . _chem_comp.name CYCLOHEXANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CXL sing 70 n n C1 C6 CXL sing 71 n n C1 O CXL sing 72 n n C1 H1 CXL sing 73 n n C2 C3 CXL sing 74 n n C2 H21 CXL sing 75 n n C2 H22 CXL sing 76 n n C3 C4 CXL sing 77 n n C3 H31 CXL sing 78 n n C3 H32 CXL sing 79 n n C4 C5 CXL sing 80 n n C4 H41 CXL sing 81 n n C4 H42 CXL sing 82 n n C5 C6 CXL sing 83 n n C5 H51 CXL sing 84 n n C5 H52 CXL sing 85 n n C6 H61 CXL sing 86 n n C6 H62 CXL sing 87 n n O HO CXL sing 88 n n # _atom_sites.entry_id 4J62 _atom_sites.fract_transf_matrix[1][1] 0.015806 _atom_sites.fract_transf_matrix[1][2] 0.009125 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018251 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0154 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 201 SO4 SO4 . C 3 CXL A 1 202 202 CXL CXL . D 3 CXL A 1 207 207 CXL CXL . E 3 CXL A 1 208 208 CXL CXL . F 3 CXL A 1 218 218 CXL CXL . G 4 HOH A 1 301 301 HOH HOH . G 4 HOH A 2 302 302 HOH HOH . G 4 HOH A 3 303 303 HOH HOH . G 4 HOH A 4 304 304 HOH HOH . G 4 HOH A 5 305 305 HOH HOH . G 4 HOH A 6 306 306 HOH HOH . G 4 HOH A 7 307 307 HOH HOH . G 4 HOH A 8 308 308 HOH HOH . G 4 HOH A 9 309 309 HOH HOH . G 4 HOH A 10 310 310 HOH HOH . G 4 HOH A 11 311 311 HOH HOH . G 4 HOH A 12 312 312 HOH HOH . G 4 HOH A 13 313 313 HOH HOH . G 4 HOH A 14 314 314 HOH HOH . G 4 HOH A 15 315 315 HOH HOH . G 4 HOH A 16 316 316 HOH HOH . G 4 HOH A 17 317 317 HOH HOH . G 4 HOH A 18 318 318 HOH HOH . G 4 HOH A 19 319 319 HOH HOH . G 4 HOH A 20 320 320 HOH HOH . G 4 HOH A 21 321 321 HOH HOH . G 4 HOH A 22 322 322 HOH HOH . G 4 HOH A 23 323 323 HOH HOH . G 4 HOH A 24 324 324 HOH HOH . G 4 HOH A 25 325 325 HOH HOH . G 4 HOH A 26 326 326 HOH HOH . G 4 HOH A 27 327 327 HOH HOH . G 4 HOH A 28 329 329 HOH HOH . G 4 HOH A 29 330 330 HOH HOH . G 4 HOH A 30 332 332 HOH HOH . G 4 HOH A 31 333 333 HOH HOH . G 4 HOH A 32 334 334 HOH HOH . G 4 HOH A 33 335 335 HOH HOH . G 4 HOH A 34 336 336 HOH HOH . G 4 HOH A 35 337 337 HOH HOH . G 4 HOH A 36 338 338 HOH HOH . G 4 HOH A 37 339 339 HOH HOH . G 4 HOH A 38 340 340 HOH HOH . G 4 HOH A 39 349 349 HOH HOH . G 4 HOH A 40 352 352 HOH HOH . G 4 HOH A 41 353 353 HOH HOH . G 4 HOH A 42 354 354 HOH HOH . G 4 HOH A 43 355 355 HOH HOH . G 4 HOH A 44 358 358 HOH HOH . G 4 HOH A 45 361 361 HOH HOH . G 4 HOH A 46 365 365 HOH HOH . G 4 HOH A 47 368 368 HOH HOH . G 4 HOH A 48 372 372 HOH HOH . G 4 HOH A 49 373 373 HOH HOH . G 4 HOH A 50 374 374 HOH HOH . G 4 HOH A 51 382 382 HOH HOH . G 4 HOH A 52 383 383 HOH HOH . G 4 HOH A 53 395 395 HOH HOH . G 4 HOH A 54 399 399 HOH HOH . G 4 HOH A 55 404 404 HOH HOH . G 4 HOH A 56 406 406 HOH HOH . G 4 HOH A 57 408 408 HOH HOH . G 4 HOH A 58 423 423 HOH HOH . G 4 HOH A 59 425 425 HOH HOH . G 4 HOH A 60 430 430 HOH HOH . G 4 HOH A 61 432 432 HOH HOH . G 4 HOH A 62 439 439 HOH HOH . G 4 HOH A 63 440 440 HOH HOH . G 4 HOH A 64 490 490 HOH HOH . G 4 HOH A 65 491 491 HOH HOH . G 4 HOH A 66 492 492 HOH HOH . G 4 HOH A 67 493 493 HOH HOH . G 4 HOH A 68 494 494 HOH HOH . G 4 HOH A 69 495 495 HOH HOH . G 4 HOH A 70 496 496 HOH HOH . G 4 HOH A 71 497 497 HOH HOH . G 4 HOH A 72 498 498 HOH HOH . G 4 HOH A 73 499 499 HOH HOH . G 4 HOH A 74 500 500 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CXL . . . E 3 13.129 82.138 -28.493 1 31.17 ? C1 CXL 208 A 1 HETATM 2 C C2 CXL . . . E 3 13.301 80.868 -29.247 1 36.32 ? C2 CXL 208 A 1 HETATM 3 C C3 CXL . . . E 3 13.52 81.221 -30.677 1 37.1 ? C3 CXL 208 A 1 HETATM 4 C C4 CXL . . . E 3 12.474 82.201 -31.079 1 48.18 ? C4 CXL 208 A 1 HETATM 5 C C5 CXL . . . E 3 11.333 82.099 -30.116 1 38.57 ? C5 CXL 208 A 1 HETATM 6 C C6 CXL . . . E 3 11.769 82.664 -28.814 1 37.41 ? C6 CXL 208 A 1 HETATM 7 O O CXL . . . E 3 13.188 81.882 -27.141 1 25.18 ? O CXL 208 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #