data_4J65
#
_model_server_result.job_id            FFNt_GqELFyAfe69Fpq6aQ 
_model_server_result.datetime_utc      '2024-11-20 01:28:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4j65 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":207}' 
#
_entry.id    4J65 
#
_exptl.entry_id    4J65 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              73.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DIMETHYLFORMAMIDE 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4J65 
_cell.length_a            63.208 
_cell.length_b            63.208 
_cell.length_c            64.682 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4J65 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf3 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
#
_chem_comp.formula           'C3 H7 N O' 
_chem_comp.formula_weight    73.094 
_chem_comp.id                DMF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DIMETHYLFORMAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 N DMF sing 83 n n 
C1 H11 DMF sing 84 n n 
C1 H12 DMF sing 85 n n 
C1 H13 DMF sing 86 n n 
C2 N DMF sing 87 n n 
C2 H21 DMF sing 88 n n 
C2 H22 DMF sing 89 n n 
C2 H23 DMF sing 90 n n 
C O DMF doub 91 n n 
C N DMF sing 92 n n 
C HC DMF sing 93 n n 
#
_atom_sites.entry_id                     4J65 
_atom_sites.fract_transf_matrix[1][1]    0.015821 
_atom_sites.fract_transf_matrix[1][2]    0.009134 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018268 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01546 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 201 201 SO4 SO4 . 
C 3 DMF A 1 202 202 DMF DMF . 
D 3 DMF A 1 207 207 DMF DMF . 
E 3 DMF A 1 208 208 DMF DMF . 
F 3 DMF A 1 209 209 DMF DMF . 
G 3 DMF A 1 217 217 DMF DMF . 
H 4 HOH A 1 301 301 HOH HOH . 
H 4 HOH A 2 302 302 HOH HOH . 
H 4 HOH A 3 303 303 HOH HOH . 
H 4 HOH A 4 304 304 HOH HOH . 
H 4 HOH A 5 305 305 HOH HOH . 
H 4 HOH A 6 306 306 HOH HOH . 
H 4 HOH A 7 307 307 HOH HOH . 
H 4 HOH A 8 308 308 HOH HOH . 
H 4 HOH A 9 309 309 HOH HOH . 
H 4 HOH A 10 310 310 HOH HOH . 
H 4 HOH A 11 311 311 HOH HOH . 
H 4 HOH A 12 312 312 HOH HOH . 
H 4 HOH A 13 313 313 HOH HOH . 
H 4 HOH A 14 314 314 HOH HOH . 
H 4 HOH A 15 315 315 HOH HOH . 
H 4 HOH A 16 316 316 HOH HOH . 
H 4 HOH A 17 317 317 HOH HOH . 
H 4 HOH A 18 318 318 HOH HOH . 
H 4 HOH A 19 319 319 HOH HOH . 
H 4 HOH A 20 320 320 HOH HOH . 
H 4 HOH A 21 321 321 HOH HOH . 
H 4 HOH A 22 322 322 HOH HOH . 
H 4 HOH A 23 323 323 HOH HOH . 
H 4 HOH A 24 324 324 HOH HOH . 
H 4 HOH A 25 325 325 HOH HOH . 
H 4 HOH A 26 326 326 HOH HOH . 
H 4 HOH A 27 327 327 HOH HOH . 
H 4 HOH A 28 328 328 HOH HOH . 
H 4 HOH A 29 331 331 HOH HOH . 
H 4 HOH A 30 333 333 HOH HOH . 
H 4 HOH A 31 334 334 HOH HOH . 
H 4 HOH A 32 337 337 HOH HOH . 
H 4 HOH A 33 338 338 HOH HOH . 
H 4 HOH A 34 339 339 HOH HOH . 
H 4 HOH A 35 340 340 HOH HOH . 
H 4 HOH A 36 349 349 HOH HOH . 
H 4 HOH A 37 353 353 HOH HOH . 
H 4 HOH A 38 356 356 HOH HOH . 
H 4 HOH A 39 358 358 HOH HOH . 
H 4 HOH A 40 360 360 HOH HOH . 
H 4 HOH A 41 361 361 HOH HOH . 
H 4 HOH A 42 362 362 HOH HOH . 
H 4 HOH A 43 369 369 HOH HOH . 
H 4 HOH A 44 372 372 HOH HOH . 
H 4 HOH A 45 373 373 HOH HOH . 
H 4 HOH A 46 375 375 HOH HOH . 
H 4 HOH A 47 378 378 HOH HOH . 
H 4 HOH A 48 381 381 HOH HOH . 
H 4 HOH A 49 383 383 HOH HOH . 
H 4 HOH A 50 384 384 HOH HOH . 
H 4 HOH A 51 391 391 HOH HOH . 
H 4 HOH A 52 399 399 HOH HOH . 
H 4 HOH A 53 406 406 HOH HOH . 
H 4 HOH A 54 407 407 HOH HOH . 
H 4 HOH A 55 409 409 HOH HOH . 
H 4 HOH A 56 411 411 HOH HOH . 
H 4 HOH A 57 412 412 HOH HOH . 
H 4 HOH A 58 420 420 HOH HOH . 
H 4 HOH A 59 422 422 HOH HOH . 
H 4 HOH A 60 425 425 HOH HOH . 
H 4 HOH A 61 430 430 HOH HOH . 
H 4 HOH A 62 432 432 HOH HOH . 
H 4 HOH A 63 439 439 HOH HOH . 
H 4 HOH A 64 440 440 HOH HOH . 
H 4 HOH A 65 443 443 HOH HOH . 
H 4 HOH A 66 471 471 HOH HOH . 
H 4 HOH A 67 472 472 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DMF . . . D 3 -21.853 -21.077 18.88 1 31.36 ? C1 DMF 207 A 1 
HETATM 2 C C2 DMF . . . D 3 -21.436 -18.622 18.48 1 39.85 ? C2 DMF 207 A 1 
HETATM 3 C C DMF . . . D 3 -23.181 -19.706 17.3 1 39.05 ? C DMF 207 A 1 
HETATM 4 O O DMF . . . D 3 -23.069 -18.9 16.356 1 39.22 ? O DMF 207 A 1 
HETATM 5 N N DMF . . . D 3 -22.2 -19.821 18.197 1 38.25 ? N DMF 207 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           758 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           5 
#