data_4J69
#
_model_server_result.job_id            54A0nx-wPOMtAsAZfEOZwQ 
_model_server_result.datetime_utc      '2024-11-29 08:16:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4j69 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":206}' 
#
_entry.id    4J69 
#
_exptl.entry_id    4J69 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              130.142 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (3S,3aR,6aS)-hexahydrofuro[2,3-b]furan-3-ol 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4J69 
_cell.length_a            64.07 
_cell.length_b            64.07 
_cell.length_c            64.073 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4J69 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf3 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf4 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C6 H10 O3' 
_chem_comp.formula_weight    130.142 
_chem_comp.id                RSG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (3S,3aR,6aS)-hexahydrofuro[2,3-b]furan-3-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C4 C1 RSG sing 277 n n 
C1 O3 RSG sing 278 n n 
C1 C2 RSG sing 279 n n 
C1 H1 RSG sing 280 n n 
C4 O1 RSG sing 281 n n 
O1 C3 RSG sing 282 n n 
C2 C3 RSG sing 283 n n 
C2 C6 RSG sing 284 n n 
C2 H2 RSG sing 285 n n 
C3 O2 RSG sing 286 n n 
O2 C5 RSG sing 287 n n 
C3 H3 RSG sing 288 n n 
O3 HO3 RSG sing 289 n n 
C4 H4 RSG sing 290 n n 
C4 H4A RSG sing 291 n n 
C6 C5 RSG sing 292 n n 
C5 H5 RSG sing 293 n n 
C5 H5A RSG sing 294 n n 
C6 H6 RSG sing 295 n n 
C6 H6A RSG sing 296 n n 
#
_atom_sites.entry_id                     4J69 
_atom_sites.fract_transf_matrix[1][1]    0.015608 
_atom_sites.fract_transf_matrix[1][2]    0.009011 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018022 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015607 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 201 201 SO4 SO4 . 
C 2 SO4 A 1 202 202 SO4 SO4 . 
D 3 RSG A 1 204 204 RSG RSG . 
E 3 RSG A 1 205 205 RSG RSG . 
F 3 RSG A 1 206 206 RSG RSG . 
G 3 RSG A 1 212 212 RSG RSG . 
H 3 RSG A 1 213 213 RSG RSG . 
I 3 RSG A 1 214 214 RSG RSG . 
J 3 RSG A 1 215 215 RSG RSG . 
K 3 RSG A 1 211 211 RSG RSG . 
L 3 RSG A 1 216 216 RSG RSG . 
M 4 HOH A 1 301 301 HOH HOH . 
M 4 HOH A 2 302 302 HOH HOH . 
M 4 HOH A 3 303 303 HOH HOH . 
M 4 HOH A 4 304 304 HOH HOH . 
M 4 HOH A 5 305 305 HOH HOH . 
M 4 HOH A 6 306 306 HOH HOH . 
M 4 HOH A 7 307 307 HOH HOH . 
M 4 HOH A 8 308 308 HOH HOH . 
M 4 HOH A 9 309 309 HOH HOH . 
M 4 HOH A 10 310 310 HOH HOH . 
M 4 HOH A 11 311 311 HOH HOH . 
M 4 HOH A 12 312 312 HOH HOH . 
M 4 HOH A 13 313 313 HOH HOH . 
M 4 HOH A 14 314 314 HOH HOH . 
M 4 HOH A 15 315 315 HOH HOH . 
M 4 HOH A 16 316 316 HOH HOH . 
M 4 HOH A 17 317 317 HOH HOH . 
M 4 HOH A 18 318 318 HOH HOH . 
M 4 HOH A 19 319 319 HOH HOH . 
M 4 HOH A 20 320 320 HOH HOH . 
M 4 HOH A 21 321 321 HOH HOH . 
M 4 HOH A 22 322 322 HOH HOH . 
M 4 HOH A 23 323 323 HOH HOH . 
M 4 HOH A 24 324 324 HOH HOH . 
M 4 HOH A 25 325 325 HOH HOH . 
M 4 HOH A 26 326 326 HOH HOH . 
M 4 HOH A 27 327 327 HOH HOH . 
M 4 HOH A 28 328 328 HOH HOH . 
M 4 HOH A 29 329 329 HOH HOH . 
M 4 HOH A 30 330 330 HOH HOH . 
M 4 HOH A 31 331 331 HOH HOH . 
M 4 HOH A 32 332 332 HOH HOH . 
M 4 HOH A 33 333 333 HOH HOH . 
M 4 HOH A 34 334 334 HOH HOH . 
M 4 HOH A 35 335 335 HOH HOH . 
M 4 HOH A 36 336 336 HOH HOH . 
M 4 HOH A 37 337 337 HOH HOH . 
M 4 HOH A 38 338 338 HOH HOH . 
M 4 HOH A 39 339 339 HOH HOH . 
M 4 HOH A 40 341 341 HOH HOH . 
M 4 HOH A 41 342 342 HOH HOH . 
M 4 HOH A 42 343 343 HOH HOH . 
M 4 HOH A 43 344 344 HOH HOH . 
M 4 HOH A 44 345 345 HOH HOH . 
M 4 HOH A 45 346 346 HOH HOH . 
M 4 HOH A 46 347 347 HOH HOH . 
M 4 HOH A 47 348 348 HOH HOH . 
M 4 HOH A 48 349 349 HOH HOH . 
M 4 HOH A 49 350 350 HOH HOH . 
M 4 HOH A 50 351 351 HOH HOH . 
M 4 HOH A 51 352 352 HOH HOH . 
M 4 HOH A 52 353 353 HOH HOH . 
M 4 HOH A 53 357 357 HOH HOH . 
M 4 HOH A 54 358 358 HOH HOH . 
M 4 HOH A 55 361 361 HOH HOH . 
M 4 HOH A 56 363 363 HOH HOH . 
M 4 HOH A 57 364 364 HOH HOH . 
M 4 HOH A 58 366 366 HOH HOH . 
M 4 HOH A 59 367 367 HOH HOH . 
M 4 HOH A 60 370 370 HOH HOH . 
M 4 HOH A 61 371 371 HOH HOH . 
M 4 HOH A 62 375 375 HOH HOH . 
M 4 HOH A 63 377 377 HOH HOH . 
M 4 HOH A 64 379 379 HOH HOH . 
M 4 HOH A 65 381 381 HOH HOH . 
M 4 HOH A 66 385 385 HOH HOH . 
M 4 HOH A 67 391 391 HOH HOH . 
M 4 HOH A 68 392 392 HOH HOH . 
M 4 HOH A 69 393 393 HOH HOH . 
M 4 HOH A 70 394 394 HOH HOH . 
M 4 HOH A 71 405 405 HOH HOH . 
M 4 HOH A 72 407 407 HOH HOH . 
M 4 HOH A 73 409 409 HOH HOH . 
M 4 HOH A 74 411 411 HOH HOH . 
M 4 HOH A 75 415 415 HOH HOH . 
M 4 HOH A 76 416 416 HOH HOH . 
M 4 HOH A 77 429 429 HOH HOH . 
M 4 HOH A 78 431 431 HOH HOH . 
M 4 HOH A 79 438 438 HOH HOH . 
M 4 HOH A 80 466 466 HOH HOH . 
M 4 HOH A 81 467 467 HOH HOH . 
M 4 HOH A 82 468 468 HOH HOH . 
M 4 HOH A 83 469 469 HOH HOH . 
M 4 HOH A 84 470 470 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 RSG . . . F 3 -34.551 -13.318 3.35 1 48.58 ? C1 RSG 206 A 1 
HETATM 2 O O1 RSG . . . F 3 -36.664 -12.713 2.492 1 54.89 ? O1 RSG 206 A 1 
HETATM 3 C C2 RSG . . . F 3 -35.17 -14.492 2.733 1 47.72 ? C2 RSG 206 A 1 
HETATM 4 O O2 RSG . . . F 3 -37.377 -14.89 2.253 1 59.21 ? O2 RSG 206 A 1 
HETATM 5 C C3 RSG . . . F 3 -36.303 -14.042 2.016 1 49.45 ? C3 RSG 206 A 1 
HETATM 6 O O3 RSG . . . F 3 -34.002 -13.656 4.589 1 51.18 ? O3 RSG 206 A 1 
HETATM 7 C C4 RSG . . . F 3 -35.622 -12.299 3.537 1 51.12 ? C4 RSG 206 A 1 
HETATM 8 C C5 RSG . . . F 3 -37.088 -15.724 3.457 1 50.86 ? C5 RSG 206 A 1 
HETATM 9 C C6 RSG . . . F 3 -35.62 -15.457 3.808 1 47.86 ? C6 RSG 206 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           241 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           9 
#