data_4J6T # _model_server_result.job_id Bus2VpBYT5MdmW4Y1qX0Qw _model_server_result.datetime_utc '2024-11-25 18:37:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j6t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4J6T # _exptl.entry_id 4J6T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.62 _cell.angle_gamma 90 _cell.entry_id 4J6T _cell.length_a 55.01 _cell.length_b 78.81 _cell.length_c 84.34 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J6T _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 42 A HIS 42 1_555 C CU CU . A CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc2 A NE2 HIS 60 A HIS 60 1_555 C CU CU . A CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc3 A NE2 HIS 69 A HIS 69 1_555 C CU CU . A CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc4 A NE2 HIS 204 A HIS 204 1_555 D CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc5 A NE2 HIS 208 A HIS 208 1_555 D CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc6 A NE2 HIS 231 A HIS 231 1_555 D CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc7 C CU CU . A CU 401 1_555 G O HOH . A HOH 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc8 D CU CU . A CU 402 1_555 G O HOH . A HOH 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc9 B NE2 HIS 42 B HIS 42 1_555 E CU CU . B CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc10 B NE2 HIS 60 B HIS 60 1_555 E CU CU . B CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc11 B NE2 HIS 69 B HIS 69 1_555 E CU CU . B CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc12 B NE2 HIS 204 B HIS 204 1_555 F CU CU . B CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc13 B NE2 HIS 208 B HIS 208 1_555 F CU CU . B CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc14 B NE2 HIS 231 B HIS 231 1_555 F CU CU . B CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc15 E CU CU . B CU 401 1_555 H O HOH . B HOH 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc16 F CU CU . B CU 402 1_555 H O HOH . B HOH 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4J6T _atom_sites.fract_transf_matrix[1][1] 0.018179 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005426 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012374 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CU A 1 401 3 CU CU . D 2 CU A 1 402 4 CU CU . E 2 CU B 1 401 1 CU CU . F 2 CU B 1 402 2 CU CU . G 3 HOH A 1 501 1 HOH HOH . G 3 HOH A 2 502 2 HOH HOH . G 3 HOH A 3 503 3 HOH HOH . G 3 HOH A 4 504 4 HOH HOH . G 3 HOH A 5 505 6 HOH HOH . G 3 HOH A 6 506 7 HOH HOH . G 3 HOH A 7 507 9 HOH HOH . G 3 HOH A 8 508 11 HOH HOH . G 3 HOH A 9 509 13 HOH HOH . G 3 HOH A 10 510 19 HOH HOH . G 3 HOH A 11 511 21 HOH HOH . G 3 HOH A 12 512 22 HOH HOH . G 3 HOH A 13 513 24 HOH HOH . G 3 HOH A 14 514 25 HOH HOH . G 3 HOH A 15 515 27 HOH HOH . G 3 HOH A 16 516 29 HOH HOH . G 3 HOH A 17 517 32 HOH HOH . G 3 HOH A 18 518 33 HOH HOH . G 3 HOH A 19 519 34 HOH HOH . G 3 HOH A 20 520 35 HOH HOH . G 3 HOH A 21 521 36 HOH HOH . G 3 HOH A 22 522 37 HOH HOH . G 3 HOH A 23 523 39 HOH HOH . G 3 HOH A 24 524 40 HOH HOH . G 3 HOH A 25 525 44 HOH HOH . G 3 HOH A 26 526 45 HOH HOH . G 3 HOH A 27 527 46 HOH HOH . G 3 HOH A 28 528 47 HOH HOH . G 3 HOH A 29 529 48 HOH HOH . G 3 HOH A 30 530 49 HOH HOH . G 3 HOH A 31 531 50 HOH HOH . G 3 HOH A 32 532 51 HOH HOH . G 3 HOH A 33 533 52 HOH HOH . G 3 HOH A 34 534 53 HOH HOH . G 3 HOH A 35 535 55 HOH HOH . G 3 HOH A 36 536 58 HOH HOH . G 3 HOH A 37 537 61 HOH HOH . G 3 HOH A 38 538 68 HOH HOH . G 3 HOH A 39 539 69 HOH HOH . G 3 HOH A 40 540 72 HOH HOH . G 3 HOH A 41 541 73 HOH HOH . G 3 HOH A 42 542 74 HOH HOH . G 3 HOH A 43 543 75 HOH HOH . G 3 HOH A 44 544 76 HOH HOH . G 3 HOH A 45 545 78 HOH HOH . G 3 HOH A 46 546 79 HOH HOH . G 3 HOH A 47 547 83 HOH HOH . G 3 HOH A 48 548 86 HOH HOH . G 3 HOH A 49 549 87 HOH HOH . G 3 HOH A 50 550 88 HOH HOH . G 3 HOH A 51 551 95 HOH HOH . G 3 HOH A 52 552 96 HOH HOH . G 3 HOH A 53 553 97 HOH HOH . G 3 HOH A 54 554 98 HOH HOH . G 3 HOH A 55 555 99 HOH HOH . G 3 HOH A 56 556 100 HOH HOH . G 3 HOH A 57 557 101 HOH HOH . G 3 HOH A 58 558 103 HOH HOH . G 3 HOH A 59 559 106 HOH HOH . G 3 HOH A 60 560 108 HOH HOH . G 3 HOH A 61 561 110 HOH HOH . G 3 HOH A 62 562 112 HOH HOH . G 3 HOH A 63 563 113 HOH HOH . G 3 HOH A 64 564 116 HOH HOH . G 3 HOH A 65 565 120 HOH HOH . G 3 HOH A 66 566 122 HOH HOH . G 3 HOH A 67 567 123 HOH HOH . G 3 HOH A 68 568 124 HOH HOH . G 3 HOH A 69 569 126 HOH HOH . G 3 HOH A 70 570 128 HOH HOH . G 3 HOH A 71 571 130 HOH HOH . G 3 HOH A 72 572 131 HOH HOH . G 3 HOH A 73 573 133 HOH HOH . G 3 HOH A 74 574 134 HOH HOH . G 3 HOH A 75 575 139 HOH HOH . G 3 HOH A 76 576 145 HOH HOH . G 3 HOH A 77 577 146 HOH HOH . G 3 HOH A 78 578 147 HOH HOH . G 3 HOH A 79 579 148 HOH HOH . G 3 HOH A 80 580 152 HOH HOH . G 3 HOH A 81 581 153 HOH HOH . G 3 HOH A 82 582 154 HOH HOH . G 3 HOH A 83 583 155 HOH HOH . G 3 HOH A 84 584 156 HOH HOH . G 3 HOH A 85 585 158 HOH HOH . G 3 HOH A 86 586 161 HOH HOH . G 3 HOH A 87 587 162 HOH HOH . G 3 HOH A 88 588 164 HOH HOH . G 3 HOH A 89 589 165 HOH HOH . G 3 HOH A 90 590 166 HOH HOH . G 3 HOH A 91 591 167 HOH HOH . G 3 HOH A 92 592 168 HOH HOH . G 3 HOH A 93 593 170 HOH HOH . G 3 HOH A 94 594 172 HOH HOH . G 3 HOH A 95 595 176 HOH HOH . G 3 HOH A 96 596 177 HOH HOH . G 3 HOH A 97 597 178 HOH HOH . G 3 HOH A 98 598 179 HOH HOH . G 3 HOH A 99 599 180 HOH HOH . G 3 HOH A 100 600 181 HOH HOH . G 3 HOH A 101 601 185 HOH HOH . G 3 HOH A 102 602 187 HOH HOH . G 3 HOH A 103 603 188 HOH HOH . G 3 HOH A 104 604 191 HOH HOH . G 3 HOH A 105 605 192 HOH HOH . G 3 HOH A 106 606 193 HOH HOH . G 3 HOH A 107 607 194 HOH HOH . G 3 HOH A 108 608 196 HOH HOH . G 3 HOH A 109 609 199 HOH HOH . G 3 HOH A 110 610 200 HOH HOH . G 3 HOH A 111 611 201 HOH HOH . G 3 HOH A 112 612 203 HOH HOH . G 3 HOH A 113 613 204 HOH HOH . G 3 HOH A 114 614 205 HOH HOH . G 3 HOH A 115 615 207 HOH HOH . G 3 HOH A 116 616 208 HOH HOH . G 3 HOH A 117 617 209 HOH HOH . G 3 HOH A 118 618 215 HOH HOH . G 3 HOH A 119 619 217 HOH HOH . G 3 HOH A 120 620 218 HOH HOH . G 3 HOH A 121 621 220 HOH HOH . H 3 HOH B 1 501 5 HOH HOH . H 3 HOH B 2 502 8 HOH HOH . H 3 HOH B 3 503 10 HOH HOH . H 3 HOH B 4 504 12 HOH HOH . H 3 HOH B 5 505 15 HOH HOH . H 3 HOH B 6 506 16 HOH HOH . H 3 HOH B 7 507 17 HOH HOH . H 3 HOH B 8 508 18 HOH HOH . H 3 HOH B 9 509 20 HOH HOH . H 3 HOH B 10 510 23 HOH HOH . H 3 HOH B 11 511 26 HOH HOH . H 3 HOH B 12 512 28 HOH HOH . H 3 HOH B 13 513 30 HOH HOH . H 3 HOH B 14 514 31 HOH HOH . H 3 HOH B 15 515 38 HOH HOH . H 3 HOH B 16 516 41 HOH HOH . H 3 HOH B 17 517 42 HOH HOH . H 3 HOH B 18 518 43 HOH HOH . H 3 HOH B 19 519 54 HOH HOH . H 3 HOH B 20 520 56 HOH HOH . H 3 HOH B 21 521 60 HOH HOH . H 3 HOH B 22 522 62 HOH HOH . H 3 HOH B 23 523 63 HOH HOH . H 3 HOH B 24 524 64 HOH HOH . H 3 HOH B 25 525 65 HOH HOH . H 3 HOH B 26 526 66 HOH HOH . H 3 HOH B 27 527 70 HOH HOH . H 3 HOH B 28 528 71 HOH HOH . H 3 HOH B 29 529 77 HOH HOH . H 3 HOH B 30 530 80 HOH HOH . H 3 HOH B 31 531 81 HOH HOH . H 3 HOH B 32 532 82 HOH HOH . H 3 HOH B 33 533 84 HOH HOH . H 3 HOH B 34 534 85 HOH HOH . H 3 HOH B 35 535 89 HOH HOH . H 3 HOH B 36 536 90 HOH HOH . H 3 HOH B 37 537 91 HOH HOH . H 3 HOH B 38 538 92 HOH HOH . H 3 HOH B 39 539 94 HOH HOH . H 3 HOH B 40 540 102 HOH HOH . H 3 HOH B 41 541 104 HOH HOH . H 3 HOH B 42 542 105 HOH HOH . H 3 HOH B 43 543 107 HOH HOH . H 3 HOH B 44 544 109 HOH HOH . H 3 HOH B 45 545 111 HOH HOH . H 3 HOH B 46 546 114 HOH HOH . H 3 HOH B 47 547 115 HOH HOH . H 3 HOH B 48 548 117 HOH HOH . H 3 HOH B 49 549 118 HOH HOH . H 3 HOH B 50 550 119 HOH HOH . H 3 HOH B 51 551 121 HOH HOH . H 3 HOH B 52 552 125 HOH HOH . H 3 HOH B 53 553 127 HOH HOH . H 3 HOH B 54 554 129 HOH HOH . H 3 HOH B 55 555 132 HOH HOH . H 3 HOH B 56 556 135 HOH HOH . H 3 HOH B 57 557 136 HOH HOH . H 3 HOH B 58 558 137 HOH HOH . H 3 HOH B 59 559 138 HOH HOH . H 3 HOH B 60 560 141 HOH HOH . H 3 HOH B 61 561 142 HOH HOH . H 3 HOH B 62 562 143 HOH HOH . H 3 HOH B 63 563 144 HOH HOH . H 3 HOH B 64 564 151 HOH HOH . H 3 HOH B 65 565 157 HOH HOH . H 3 HOH B 66 566 159 HOH HOH . H 3 HOH B 67 567 160 HOH HOH . H 3 HOH B 68 568 163 HOH HOH . H 3 HOH B 69 569 171 HOH HOH . H 3 HOH B 70 570 174 HOH HOH . H 3 HOH B 71 571 175 HOH HOH . H 3 HOH B 72 572 182 HOH HOH . H 3 HOH B 73 573 183 HOH HOH . H 3 HOH B 74 574 184 HOH HOH . H 3 HOH B 75 575 186 HOH HOH . H 3 HOH B 76 576 189 HOH HOH . H 3 HOH B 77 577 190 HOH HOH . H 3 HOH B 78 578 195 HOH HOH . H 3 HOH B 79 579 197 HOH HOH . H 3 HOH B 80 580 198 HOH HOH . H 3 HOH B 81 581 202 HOH HOH . H 3 HOH B 82 582 206 HOH HOH . H 3 HOH B 83 583 210 HOH HOH . H 3 HOH B 84 584 211 HOH HOH . H 3 HOH B 85 585 212 HOH HOH . H 3 HOH B 86 586 213 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 3.137 _atom_site.Cartn_y -14.429 _atom_site.Cartn_z 15.397 _atom_site.occupancy 0.8 _atom_site.B_iso_or_equiv 35.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #