data_4J7E # _model_server_result.job_id eveD2iOmUmtlJXiXMn7wgw _model_server_result.datetime_utc '2024-11-22 19:14:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j7e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4J7E # _exptl.entry_id 4J7E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 565.555 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(4S,5R)-4,5-bis(4-chlorophenyl)-2,4,5-trimethyl-4,5-dihydro-1H-imidazol-1-yl]{4-[3-(methylsulfonyl)propyl]piperazin-1-yl}methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4J7E _cell.length_a 43.29 _cell.length_b 68.612 _cell.length_c 67.349 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J7E _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H34 Cl2 N4 O3 S' _chem_comp.formula_weight 565.555 _chem_comp.id I29 _chem_comp.mon_nstd_flag . _chem_comp.name '[(4S,5R)-4,5-bis(4-chlorophenyl)-2,4,5-trimethyl-4,5-dihydro-1H-imidazol-1-yl]{4-[3-(methylsulfonyl)propyl]piperazin-1-yl}methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL5 C54 I29 sing 152 n n C53 C54 I29 doub 153 n y C53 C52 I29 sing 154 n y C54 C55 I29 sing 155 n y C52 C51 I29 doub 156 n y CL4 C44 I29 sing 157 n n C55 C56 I29 doub 158 n y C44 C43 I29 doub 159 n y C44 C45 I29 sing 160 n y C51 C56 I29 sing 161 n y C51 C5 I29 sing 162 n n C43 C42 I29 sing 163 n y C45 C46 I29 doub 164 n y C57 C5 I29 sing 165 n n O10 C10 I29 doub 166 n n C42 C41 I29 doub 167 n y C5 C4 I29 sing 168 n n C5 N1 I29 sing 169 n n C46 C41 I29 sing 170 n y C41 C4 I29 sing 171 n n C10 N1 I29 sing 172 n n C10 N10 I29 sing 173 n n C4 C47 I29 sing 174 n n C4 N3 I29 sing 175 n n N1 C2 I29 sing 176 n n C14 N10 I29 sing 177 n n C14 C13 I29 sing 178 n n N10 C11 I29 sing 179 n n C2 N3 I29 doub 180 n n C2 C21 I29 sing 181 n n C13 N12 I29 sing 182 n n C11 C12 I29 sing 183 n n N12 C12 I29 sing 184 n n N12 C15 I29 sing 185 n n C15 C16 I29 sing 186 n n C16 C17 I29 sing 187 n n C17 S17 I29 sing 188 n n O18 S17 I29 doub 189 n n S17 O17 I29 doub 190 n n S17 C19 I29 sing 191 n n C57 H1 I29 sing 192 n n C57 H2 I29 sing 193 n n C57 H3 I29 sing 194 n n C47 H4 I29 sing 195 n n C47 H5 I29 sing 196 n n C47 H6 I29 sing 197 n n C21 H10 I29 sing 198 n n C21 H11 I29 sing 199 n n C21 H12 I29 sing 200 n n C56 H13 I29 sing 201 n n C55 H14 I29 sing 202 n n C53 H15 I29 sing 203 n n C52 H16 I29 sing 204 n n C42 H17 I29 sing 205 n n C43 H18 I29 sing 206 n n C45 H19 I29 sing 207 n n C46 H20 I29 sing 208 n n C14 H21 I29 sing 209 n n C14 H22 I29 sing 210 n n C13 H23 I29 sing 211 n n C13 H24 I29 sing 212 n n C12 H26 I29 sing 213 n n C12 H27 I29 sing 214 n n C11 H28 I29 sing 215 n n C11 H29 I29 sing 216 n n C16 H30 I29 sing 217 n n C16 H31 I29 sing 218 n n C17 H32 I29 sing 219 n n C17 H33 I29 sing 220 n n C19 H34 I29 sing 221 n n C19 H35 I29 sing 222 n n C19 H36 I29 sing 223 n n C15 H37 I29 sing 224 n n C15 H38 I29 sing 225 n n # _atom_sites.entry_id 4J7E _atom_sites.fract_transf_matrix[1][1] 0.0231 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014575 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014848 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 I29 A 1 201 1 I29 I29 . C 3 SO4 A 1 202 1 SO4 SO4 . D 4 HOH A 1 301 2 HOH HOH . D 4 HOH A 2 302 3 HOH HOH . D 4 HOH A 3 303 4 HOH HOH . D 4 HOH A 4 304 5 HOH HOH . D 4 HOH A 5 305 6 HOH HOH . D 4 HOH A 6 306 7 HOH HOH . D 4 HOH A 7 307 8 HOH HOH . D 4 HOH A 8 308 9 HOH HOH . D 4 HOH A 9 309 10 HOH HOH . D 4 HOH A 10 310 11 HOH HOH . D 4 HOH A 11 311 12 HOH HOH . D 4 HOH A 12 312 13 HOH HOH . D 4 HOH A 13 313 14 HOH HOH . D 4 HOH A 14 314 15 HOH HOH . D 4 HOH A 15 315 16 HOH HOH . D 4 HOH A 16 316 17 HOH HOH . D 4 HOH A 17 317 18 HOH HOH . D 4 HOH A 18 318 19 HOH HOH . D 4 HOH A 19 319 20 HOH HOH . D 4 HOH A 20 320 21 HOH HOH . D 4 HOH A 21 321 22 HOH HOH . D 4 HOH A 22 322 23 HOH HOH . D 4 HOH A 23 323 24 HOH HOH . D 4 HOH A 24 324 25 HOH HOH . D 4 HOH A 25 325 26 HOH HOH . D 4 HOH A 26 326 27 HOH HOH . D 4 HOH A 27 327 28 HOH HOH . D 4 HOH A 28 328 29 HOH HOH . D 4 HOH A 29 329 30 HOH HOH . D 4 HOH A 30 330 31 HOH HOH . D 4 HOH A 31 331 32 HOH HOH . D 4 HOH A 32 332 33 HOH HOH . D 4 HOH A 33 333 34 HOH HOH . D 4 HOH A 34 334 35 HOH HOH . D 4 HOH A 35 335 36 HOH HOH . D 4 HOH A 36 336 37 HOH HOH . D 4 HOH A 37 337 38 HOH HOH . D 4 HOH A 38 338 39 HOH HOH . D 4 HOH A 39 339 40 HOH HOH . D 4 HOH A 40 340 41 HOH HOH . D 4 HOH A 41 341 42 HOH HOH . D 4 HOH A 42 342 43 HOH HOH . D 4 HOH A 43 343 44 HOH HOH . D 4 HOH A 44 344 45 HOH HOH . D 4 HOH A 45 345 46 HOH HOH . D 4 HOH A 46 346 47 HOH HOH . D 4 HOH A 47 347 48 HOH HOH . D 4 HOH A 48 348 49 HOH HOH . D 4 HOH A 49 349 50 HOH HOH . D 4 HOH A 50 350 51 HOH HOH . D 4 HOH A 51 351 52 HOH HOH . D 4 HOH A 52 352 53 HOH HOH . D 4 HOH A 53 353 54 HOH HOH . D 4 HOH A 54 354 55 HOH HOH . D 4 HOH A 55 355 56 HOH HOH . D 4 HOH A 56 356 57 HOH HOH . D 4 HOH A 57 357 58 HOH HOH . D 4 HOH A 58 358 59 HOH HOH . D 4 HOH A 59 359 60 HOH HOH . D 4 HOH A 60 360 61 HOH HOH . D 4 HOH A 61 361 62 HOH HOH . D 4 HOH A 62 362 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 I29 . . . B 2 -12.931 -8.611 2.64 1 36.31 ? N1 I29 201 A 1 HETATM 2 C C5 I29 . . . B 2 -12.037 -9.226 1.66 1 31.25 ? C5 I29 201 A 1 HETATM 3 C C57 I29 . . . B 2 -10.971 -8.245 1.158 1 29.65 ? C57 I29 201 A 1 HETATM 4 C C51 I29 . . . B 2 -12.852 -9.812 0.504 1 28.22 ? C51 I29 201 A 1 HETATM 5 C C4 I29 . . . B 2 -11.407 -10.343 2.555 1 30.42 ? C4 I29 201 A 1 HETATM 6 C C47 I29 . . . B 2 -10.091 -9.837 3.159 1 30.43 ? C47 I29 201 A 1 HETATM 7 C C41 I29 . . . B 2 -11.166 -11.631 1.816 1 26.92 ? C41 I29 201 A 1 HETATM 8 N N3 I29 . . . B 2 -12.401 -10.538 3.638 1 33.12 ? N3 I29 201 A 1 HETATM 9 C C2 I29 . . . B 2 -13.276 -9.609 3.595 1 35.56 ? C2 I29 201 A 1 HETATM 10 C C21 I29 . . . B 2 -14.576 -9.571 4.348 1 37.95 ? C21 I29 201 A 1 HETATM 11 C C56 I29 . . . B 2 -14.228 -10.045 0.666 1 26.09 ? C56 I29 201 A 1 HETATM 12 C C55 I29 . . . B 2 -14.96 -10.68 -0.334 1 26.51 ? C55 I29 201 A 1 HETATM 13 C C54 I29 . . . B 2 -14.321 -11.094 -1.505 1 24.78 ? C54 I29 201 A 1 HETATM 14 CL CL5 I29 . . . B 2 -15.212 -12.049 -2.693 1 27.07 ? CL5 I29 201 A 1 HETATM 15 C C53 I29 . . . B 2 -12.972 -10.78 -1.72 1 24.21 ? C53 I29 201 A 1 HETATM 16 C C52 I29 . . . B 2 -12.239 -10.141 -0.712 1 24.21 ? C52 I29 201 A 1 HETATM 17 C C42 I29 . . . B 2 -9.915 -11.873 1.235 1 24.43 ? C42 I29 201 A 1 HETATM 18 C C43 I29 . . . B 2 -9.687 -13.056 0.538 1 22 ? C43 I29 201 A 1 HETATM 19 C C44 I29 . . . B 2 -10.717 -13.992 0.413 1 21.98 ? C44 I29 201 A 1 HETATM 20 CL CL4 I29 . . . B 2 -10.458 -15.441 -0.538 1 23.68 ? CL4 I29 201 A 1 HETATM 21 C C45 I29 . . . B 2 -11.955 -13.771 1.019 1 22.5 ? C45 I29 201 A 1 HETATM 22 C C46 I29 . . . B 2 -12.175 -12.587 1.719 1 23.95 ? C46 I29 201 A 1 HETATM 23 C C10 I29 . . . B 2 -13.66 -7.395 2.351 1 43.33 ? C10 I29 201 A 1 HETATM 24 O O10 I29 . . . B 2 -13.641 -6.913 1.201 1 44.28 ? O10 I29 201 A 1 HETATM 25 N N10 I29 . . . B 2 -14.37 -6.762 3.398 1 48.83 ? N10 I29 201 A 1 HETATM 26 C C14 I29 . . . B 2 -15.667 -6.157 3.119 1 51.32 ? C14 I29 201 A 1 HETATM 27 C C13 I29 . . . B 2 -16.521 -6.186 4.367 1 54.03 ? C13 I29 201 A 1 HETATM 28 N N12 I29 . . . B 2 -15.933 -5.321 5.398 1 55.96 ? N12 I29 201 A 1 HETATM 29 C C12 I29 . . . B 2 -14.472 -5.595 5.623 1 54.3 ? C12 I29 201 A 1 HETATM 30 C C11 I29 . . . B 2 -13.943 -6.818 4.821 1 51.37 ? C11 I29 201 A 1 HETATM 31 C C16 I29 . . . B 2 -16.22 -4.404 7.685 1 62.95 ? C16 I29 201 A 1 HETATM 32 C C17 I29 . . . B 2 -17.253 -4.238 8.807 1 66.36 ? C17 I29 201 A 1 HETATM 33 S S17 I29 . . . B 2 -16.566 -4.71 10.383 1 69.23 ? S17 I29 201 A 1 HETATM 34 C C19 I29 . . . B 2 -17.895 -4.514 11.552 1 68.54 ? C19 I29 201 A 1 HETATM 35 O O17 I29 . . . B 2 -15.499 -3.774 10.729 1 68.92 ? O17 I29 201 A 1 HETATM 36 O O18 I29 . . . B 2 -16.199 -6.123 10.327 1 68.76 ? O18 I29 201 A 1 HETATM 37 C C15 I29 . . . B 2 -16.712 -5.425 6.655 1 58.83 ? C15 I29 201 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 37 #