data_4J7O # _model_server_result.job_id 5tbPMnmCp1VrHQztkHzUZg _model_server_result.datetime_utc '2024-12-26 14:41:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j7o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 4J7O # _exptl.entry_id 4J7O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4J7O _cell.length_a 82.02 _cell.length_b 102.87 _cell.length_c 55.05 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J7O _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 4J7O _atom_sites.fract_transf_matrix[1][1] 0.012192 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018165 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 501 400 GOL GOL . C 2 GOL A 1 502 401 GOL GOL . D 2 GOL A 1 503 402 GOL GOL . E 2 GOL A 1 504 403 GOL GOL . F 2 GOL A 1 505 404 GOL GOL . G 3 HOH A 1 601 1 HOH HOH . G 3 HOH A 2 602 2 HOH HOH . G 3 HOH A 3 603 3 HOH HOH . G 3 HOH A 4 604 4 HOH HOH . G 3 HOH A 5 605 5 HOH HOH . G 3 HOH A 6 606 6 HOH HOH . G 3 HOH A 7 607 7 HOH HOH . G 3 HOH A 8 608 8 HOH HOH . G 3 HOH A 9 609 9 HOH HOH . G 3 HOH A 10 610 10 HOH HOH . G 3 HOH A 11 611 11 HOH HOH . G 3 HOH A 12 612 12 HOH HOH . G 3 HOH A 13 613 13 HOH HOH . G 3 HOH A 14 614 14 HOH HOH . G 3 HOH A 15 615 15 HOH HOH . G 3 HOH A 16 616 16 HOH HOH . G 3 HOH A 17 617 17 HOH HOH . G 3 HOH A 18 618 18 HOH HOH . G 3 HOH A 19 619 19 HOH HOH . G 3 HOH A 20 620 20 HOH HOH . G 3 HOH A 21 621 21 HOH HOH . G 3 HOH A 22 622 22 HOH HOH . G 3 HOH A 23 623 23 HOH HOH . G 3 HOH A 24 624 24 HOH HOH . G 3 HOH A 25 625 25 HOH HOH . G 3 HOH A 26 626 26 HOH HOH . G 3 HOH A 27 627 27 HOH HOH . G 3 HOH A 28 628 28 HOH HOH . G 3 HOH A 29 629 30 HOH HOH . G 3 HOH A 30 630 31 HOH HOH . G 3 HOH A 31 631 32 HOH HOH . G 3 HOH A 32 632 33 HOH HOH . G 3 HOH A 33 633 34 HOH HOH . G 3 HOH A 34 634 35 HOH HOH . G 3 HOH A 35 635 36 HOH HOH . G 3 HOH A 36 636 37 HOH HOH . G 3 HOH A 37 637 38 HOH HOH . G 3 HOH A 38 638 39 HOH HOH . G 3 HOH A 39 639 40 HOH HOH . G 3 HOH A 40 640 41 HOH HOH . G 3 HOH A 41 641 42 HOH HOH . G 3 HOH A 42 642 43 HOH HOH . G 3 HOH A 43 643 44 HOH HOH . G 3 HOH A 44 644 45 HOH HOH . G 3 HOH A 45 645 46 HOH HOH . G 3 HOH A 46 646 47 HOH HOH . G 3 HOH A 47 647 48 HOH HOH . G 3 HOH A 48 648 49 HOH HOH . G 3 HOH A 49 649 50 HOH HOH . G 3 HOH A 50 650 51 HOH HOH . G 3 HOH A 51 651 52 HOH HOH . G 3 HOH A 52 652 53 HOH HOH . G 3 HOH A 53 653 54 HOH HOH . G 3 HOH A 54 654 55 HOH HOH . G 3 HOH A 55 655 56 HOH HOH . G 3 HOH A 56 656 57 HOH HOH . G 3 HOH A 57 657 58 HOH HOH . G 3 HOH A 58 658 59 HOH HOH . G 3 HOH A 59 659 60 HOH HOH . G 3 HOH A 60 660 61 HOH HOH . G 3 HOH A 61 661 62 HOH HOH . G 3 HOH A 62 662 63 HOH HOH . G 3 HOH A 63 663 64 HOH HOH . G 3 HOH A 64 664 65 HOH HOH . G 3 HOH A 65 665 66 HOH HOH . G 3 HOH A 66 666 67 HOH HOH . G 3 HOH A 67 667 68 HOH HOH . G 3 HOH A 68 668 69 HOH HOH . G 3 HOH A 69 669 70 HOH HOH . G 3 HOH A 70 670 71 HOH HOH . G 3 HOH A 71 671 72 HOH HOH . G 3 HOH A 72 672 73 HOH HOH . G 3 HOH A 73 673 74 HOH HOH . G 3 HOH A 74 674 75 HOH HOH . G 3 HOH A 75 675 76 HOH HOH . G 3 HOH A 76 676 77 HOH HOH . G 3 HOH A 77 677 78 HOH HOH . G 3 HOH A 78 678 80 HOH HOH . G 3 HOH A 79 679 81 HOH HOH . G 3 HOH A 80 680 82 HOH HOH . G 3 HOH A 81 681 83 HOH HOH . G 3 HOH A 82 682 84 HOH HOH . G 3 HOH A 83 683 85 HOH HOH . G 3 HOH A 84 684 86 HOH HOH . G 3 HOH A 85 685 87 HOH HOH . G 3 HOH A 86 686 88 HOH HOH . G 3 HOH A 87 687 89 HOH HOH . G 3 HOH A 88 688 90 HOH HOH . G 3 HOH A 89 689 91 HOH HOH . G 3 HOH A 90 690 92 HOH HOH . G 3 HOH A 91 691 93 HOH HOH . G 3 HOH A 92 692 94 HOH HOH . G 3 HOH A 93 693 95 HOH HOH . G 3 HOH A 94 694 96 HOH HOH . G 3 HOH A 95 695 97 HOH HOH . G 3 HOH A 96 696 98 HOH HOH . G 3 HOH A 97 697 99 HOH HOH . G 3 HOH A 98 698 100 HOH HOH . G 3 HOH A 99 699 101 HOH HOH . G 3 HOH A 100 700 102 HOH HOH . G 3 HOH A 101 701 103 HOH HOH . G 3 HOH A 102 702 104 HOH HOH . G 3 HOH A 103 703 105 HOH HOH . G 3 HOH A 104 704 106 HOH HOH . G 3 HOH A 105 705 107 HOH HOH . G 3 HOH A 106 706 108 HOH HOH . G 3 HOH A 107 707 109 HOH HOH . G 3 HOH A 108 708 110 HOH HOH . G 3 HOH A 109 709 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 26.211 21.619 72.548 1 92.89 ? C1 GOL 502 A 1 HETATM 2 O O1 GOL . . . C 2 27.001 21.873 71.423 1 89.09 ? O1 GOL 502 A 1 HETATM 3 C C2 GOL . . . C 2 26.323 22.899 73.421 1 86.57 ? C2 GOL 502 A 1 HETATM 4 O O2 GOL . . . C 2 25.309 22.86 74.38 1 84.32 ? O2 GOL 502 A 1 HETATM 5 C C3 GOL . . . C 2 26.047 24.125 72.519 1 87.5 ? C3 GOL 502 A 1 HETATM 6 O O3 GOL . . . C 2 25.537 25.109 73.374 1 86.14 ? O3 GOL 502 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #