data_4J7X # _model_server_result.job_id 1Au1NsxYkN_HHgtla5WFDQ _model_server_result.datetime_utc '2024-10-14 00:25:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j7x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":806}' # _entry.id 4J7X # _exptl.entry_id 4J7X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4J7X _cell.length_a 149.194 _cell.length_b 149.194 _cell.length_c 180.552 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J7X _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O,P,Q,EA,FA 1 1 C,D,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,GA,HA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 Q N N ? 5 W N N ? 5 X N N ? 5 CA N N ? 5 DA N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 330 n n C1 C2 PEG sing 331 n n C1 H11 PEG sing 332 n n C1 H12 PEG sing 333 n n O1 HO1 PEG sing 334 n n C2 O2 PEG sing 335 n n C2 H21 PEG sing 336 n n C2 H22 PEG sing 337 n n O2 C3 PEG sing 338 n n C3 C4 PEG sing 339 n n C3 H31 PEG sing 340 n n C3 H32 PEG sing 341 n n C4 O4 PEG sing 342 n n C4 H41 PEG sing 343 n n C4 H42 PEG sing 344 n n O4 HO4 PEG sing 345 n n # _atom_sites.entry_id 4J7X _atom_sites.fract_transf_matrix[1][1] 0.006703 _atom_sites.fract_transf_matrix[1][2] 0.00387 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00774 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005539 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAP A 1 801 801 NAP NAP . F 3 SO4 A 1 802 1 SO4 SO4 . G 3 SO4 A 1 803 5 SO4 SO4 . H 3 SO4 A 1 804 7 SO4 SO4 . I 3 SO4 A 1 805 8 SO4 SO4 . J 4 SAS A 1 806 210 SAS SAS . K 5 PEG A 1 807 1 PEG PEG . L 2 NAP B 1 801 801 NAP NAP . M 3 SO4 B 1 802 2 SO4 SO4 . N 3 SO4 B 1 803 10 SO4 SO4 . O 4 SAS B 1 804 210 SAS SAS . P 3 SO4 B 1 805 1 SO4 SO4 . Q 5 PEG B 1 806 1 PEG PEG . R 2 NAP F 1 801 801 NAP NAP . S 3 SO4 F 1 802 3 SO4 SO4 . T 3 SO4 F 1 803 6 SO4 SO4 . U 6 GOL F 1 804 1 GOL GOL . V 4 SAS F 1 805 210 SAS SAS . W 5 PEG F 1 806 1 PEG PEG . X 5 PEG F 1 807 1 PEG PEG . Y 2 NAP J 1 801 801 NAP NAP . Z 3 SO4 J 1 802 4 SO4 SO4 . AA 6 GOL J 1 803 1 GOL GOL . BA 4 SAS J 1 804 210 SAS SAS . CA 5 PEG J 1 805 1 PEG PEG . DA 5 PEG J 1 806 1 PEG PEG . EA 7 HOH A 1 901 1 HOH HOH . EA 7 HOH A 2 902 5 HOH HOH . EA 7 HOH A 3 903 21 HOH HOH . EA 7 HOH A 4 904 26 HOH HOH . EA 7 HOH A 5 905 29 HOH HOH . EA 7 HOH A 6 906 33 HOH HOH . EA 7 HOH A 7 907 38 HOH HOH . EA 7 HOH A 8 908 46 HOH HOH . EA 7 HOH A 9 909 54 HOH HOH . EA 7 HOH A 10 910 73 HOH HOH . EA 7 HOH A 11 911 80 HOH HOH . EA 7 HOH A 12 912 127 HOH HOH . EA 7 HOH A 13 913 148 HOH HOH . EA 7 HOH A 14 914 155 HOH HOH . EA 7 HOH A 15 915 179 HOH HOH . EA 7 HOH A 16 916 182 HOH HOH . EA 7 HOH A 17 917 415 HOH HOH . EA 7 HOH A 18 918 427 HOH HOH . EA 7 HOH A 19 919 428 HOH HOH . EA 7 HOH A 20 920 430 HOH HOH . EA 7 HOH A 21 921 435 HOH HOH . EA 7 HOH A 22 922 451 HOH HOH . EA 7 HOH A 23 923 452 HOH HOH . EA 7 HOH A 24 924 453 HOH HOH . EA 7 HOH A 25 925 454 HOH HOH . EA 7 HOH A 26 926 464 HOH HOH . EA 7 HOH A 27 927 485 HOH HOH . EA 7 HOH A 28 928 486 HOH HOH . EA 7 HOH A 29 929 493 HOH HOH . EA 7 HOH A 30 930 494 HOH HOH . EA 7 HOH A 31 931 1 HOH HOH . EA 7 HOH A 32 932 2 HOH HOH . EA 7 HOH A 33 933 3 HOH HOH . FA 7 HOH B 1 901 11 HOH HOH . FA 7 HOH B 2 902 17 HOH HOH . FA 7 HOH B 3 903 20 HOH HOH . FA 7 HOH B 4 904 25 HOH HOH . FA 7 HOH B 5 905 27 HOH HOH . FA 7 HOH B 6 906 31 HOH HOH . FA 7 HOH B 7 907 43 HOH HOH . FA 7 HOH B 8 908 59 HOH HOH . FA 7 HOH B 9 909 66 HOH HOH . FA 7 HOH B 10 910 69 HOH HOH . FA 7 HOH B 11 911 75 HOH HOH . FA 7 HOH B 12 912 109 HOH HOH . FA 7 HOH B 13 913 111 HOH HOH . FA 7 HOH B 14 914 123 HOH HOH . FA 7 HOH B 15 915 146 HOH HOH . FA 7 HOH B 16 916 403 HOH HOH . FA 7 HOH B 17 917 426 HOH HOH . FA 7 HOH B 18 918 429 HOH HOH . FA 7 HOH B 19 919 433 HOH HOH . FA 7 HOH B 20 920 434 HOH HOH . FA 7 HOH B 21 921 446 HOH HOH . FA 7 HOH B 22 922 455 HOH HOH . FA 7 HOH B 23 923 460 HOH HOH . FA 7 HOH B 24 924 461 HOH HOH . FA 7 HOH B 25 925 479 HOH HOH . FA 7 HOH B 26 926 482 HOH HOH . FA 7 HOH B 27 927 488 HOH HOH . FA 7 HOH B 28 928 492 HOH HOH . FA 7 HOH B 29 929 66 HOH HOH . FA 7 HOH B 30 930 93 HOH HOH . FA 7 HOH B 31 931 131 HOH HOH . GA 7 HOH F 1 901 9 HOH HOH . GA 7 HOH F 2 902 16 HOH HOH . GA 7 HOH F 3 903 28 HOH HOH . GA 7 HOH F 4 904 30 HOH HOH . GA 7 HOH F 5 905 36 HOH HOH . GA 7 HOH F 6 906 42 HOH HOH . GA 7 HOH F 7 907 55 HOH HOH . GA 7 HOH F 8 908 56 HOH HOH . GA 7 HOH F 9 909 93 HOH HOH . GA 7 HOH F 10 910 264 HOH HOH . GA 7 HOH F 11 911 334 HOH HOH . GA 7 HOH F 12 912 338 HOH HOH . GA 7 HOH F 13 913 418 HOH HOH . GA 7 HOH F 14 914 423 HOH HOH . GA 7 HOH F 15 915 425 HOH HOH . GA 7 HOH F 16 916 437 HOH HOH . GA 7 HOH F 17 917 438 HOH HOH . GA 7 HOH F 18 918 440 HOH HOH . GA 7 HOH F 19 919 447 HOH HOH . GA 7 HOH F 20 920 450 HOH HOH . GA 7 HOH F 21 921 462 HOH HOH . GA 7 HOH F 22 922 484 HOH HOH . GA 7 HOH F 23 923 182 HOH HOH . GA 7 HOH F 24 924 224 HOH HOH . GA 7 HOH F 25 925 358 HOH HOH . HA 7 HOH J 1 901 14 HOH HOH . HA 7 HOH J 2 902 115 HOH HOH . HA 7 HOH J 3 903 125 HOH HOH . HA 7 HOH J 4 904 246 HOH HOH . HA 7 HOH J 5 905 416 HOH HOH . HA 7 HOH J 6 906 417 HOH HOH . HA 7 HOH J 7 907 424 HOH HOH . HA 7 HOH J 8 908 431 HOH HOH . HA 7 HOH J 9 909 458 HOH HOH . HA 7 HOH J 10 910 459 HOH HOH . HA 7 HOH J 11 911 489 HOH HOH . HA 7 HOH J 12 912 491 HOH HOH . HA 7 HOH J 13 913 82 HOH HOH . HA 7 HOH J 14 914 193 HOH HOH . HA 7 HOH J 15 915 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . Q 5 0.22 -45.89 26.197 1 80.91 ? C1 PEG 806 B 1 HETATM 2 O O1 PEG . . . Q 5 -0.205 -46.868 25.237 1 78.76 ? O1 PEG 806 B 1 HETATM 3 C C2 PEG . . . Q 5 -0.727 -45.889 27.396 1 81.55 ? C2 PEG 806 B 1 HETATM 4 O O2 PEG . . . Q 5 -2.088 -45.73 26.976 1 80.77 ? O2 PEG 806 B 1 HETATM 5 C C3 PEG . . . Q 5 -2.888 -45.032 27.937 1 75.03 ? C3 PEG 806 B 1 HETATM 6 C C4 PEG . . . Q 5 -4.199 -45.775 28.198 1 72.84 ? C4 PEG 806 B 1 HETATM 7 O O4 PEG . . . Q 5 -3.954 -47.085 28.738 1 68.2 ? O4 PEG 806 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 48 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #