data_4J8C
#
_model_server_result.job_id            Aa1475wtTTN-2BbJt0-zEA 
_model_server_result.datetime_utc      '2024-10-13 02:24:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4j8c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":101}' 
#
_entry.id    4J8C 
#
_exptl.entry_id    4J8C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.44 
_cell.angle_gamma         90 
_cell.entry_id            4J8C 
_cell.length_a            28.775 
_cell.length_b            43.978 
_cell.length_c            32.211 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4J8C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 113 n n 
C1 C2 GOL sing 114 n n 
C1 H11 GOL sing 115 n n 
C1 H12 GOL sing 116 n n 
O1 HO1 GOL sing 117 n n 
C2 O2 GOL sing 118 n n 
C2 C3 GOL sing 119 n n 
C2 H2 GOL sing 120 n n 
O2 HO2 GOL sing 121 n n 
C3 O3 GOL sing 122 n n 
C3 H31 GOL sing 123 n n 
C3 H32 GOL sing 124 n n 
O3 HO3 GOL sing 125 n n 
#
_atom_sites.entry_id                     4J8C 
_atom_sites.fract_transf_matrix[1][1]    0.034752 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002089 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022739 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.031101 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL B 1 101 1 GOL GOL . 
D 3 HOH A 1 101 1 HOH HOH . 
D 3 HOH A 2 102 2 HOH HOH . 
D 3 HOH A 3 103 3 HOH HOH . 
D 3 HOH A 4 104 4 HOH HOH . 
D 3 HOH A 5 105 7 HOH HOH . 
D 3 HOH A 6 106 11 HOH HOH . 
D 3 HOH A 7 107 17 HOH HOH . 
D 3 HOH A 8 108 21 HOH HOH . 
D 3 HOH A 9 109 22 HOH HOH . 
D 3 HOH A 10 110 23 HOH HOH . 
D 3 HOH A 11 111 24 HOH HOH . 
D 3 HOH A 12 112 27 HOH HOH . 
D 3 HOH A 13 113 34 HOH HOH . 
D 3 HOH A 14 114 35 HOH HOH . 
D 3 HOH A 15 115 37 HOH HOH . 
D 3 HOH A 16 116 40 HOH HOH . 
D 3 HOH A 17 117 41 HOH HOH . 
D 3 HOH A 18 118 42 HOH HOH . 
D 3 HOH A 19 119 45 HOH HOH . 
D 3 HOH A 20 120 46 HOH HOH . 
D 3 HOH A 21 121 47 HOH HOH . 
D 3 HOH A 22 122 48 HOH HOH . 
D 3 HOH A 23 123 50 HOH HOH . 
D 3 HOH A 24 124 52 HOH HOH . 
D 3 HOH A 25 125 53 HOH HOH . 
D 3 HOH A 26 126 54 HOH HOH . 
D 3 HOH A 27 127 57 HOH HOH . 
D 3 HOH A 28 128 58 HOH HOH . 
D 3 HOH A 29 129 59 HOH HOH . 
D 3 HOH A 30 130 60 HOH HOH . 
D 3 HOH A 31 131 62 HOH HOH . 
D 3 HOH A 32 132 64 HOH HOH . 
D 3 HOH A 33 133 66 HOH HOH . 
D 3 HOH A 34 134 68 HOH HOH . 
D 3 HOH A 35 135 70 HOH HOH . 
D 3 HOH A 36 136 74 HOH HOH . 
D 3 HOH A 37 137 82 HOH HOH . 
D 3 HOH A 38 138 83 HOH HOH . 
D 3 HOH A 39 139 84 HOH HOH . 
D 3 HOH A 40 140 85 HOH HOH . 
D 3 HOH A 41 141 87 HOH HOH . 
D 3 HOH A 42 142 88 HOH HOH . 
D 3 HOH A 43 143 90 HOH HOH . 
D 3 HOH A 44 144 91 HOH HOH . 
D 3 HOH A 45 145 92 HOH HOH . 
D 3 HOH A 46 146 94 HOH HOH . 
D 3 HOH A 47 147 95 HOH HOH . 
D 3 HOH A 48 148 96 HOH HOH . 
D 3 HOH A 49 149 98 HOH HOH . 
D 3 HOH A 50 150 99 HOH HOH . 
D 3 HOH A 51 151 100 HOH HOH . 
D 3 HOH A 52 152 101 HOH HOH . 
D 3 HOH A 53 153 102 HOH HOH . 
D 3 HOH A 54 154 104 HOH HOH . 
D 3 HOH A 55 155 105 HOH HOH . 
D 3 HOH A 56 156 106 HOH HOH . 
D 3 HOH A 57 157 107 HOH HOH . 
D 3 HOH A 58 158 108 HOH HOH . 
D 3 HOH A 59 159 115 HOH HOH . 
D 3 HOH A 60 160 118 HOH HOH . 
D 3 HOH A 61 161 121 HOH HOH . 
D 3 HOH A 62 162 122 HOH HOH . 
D 3 HOH A 63 163 123 HOH HOH . 
D 3 HOH A 64 164 125 HOH HOH . 
D 3 HOH A 65 165 127 HOH HOH . 
D 3 HOH A 66 166 128 HOH HOH . 
D 3 HOH A 67 167 131 HOH HOH . 
D 3 HOH A 68 168 132 HOH HOH . 
D 3 HOH A 69 169 133 HOH HOH . 
D 3 HOH A 70 170 134 HOH HOH . 
D 3 HOH A 71 171 135 HOH HOH . 
D 3 HOH A 72 172 136 HOH HOH . 
D 3 HOH A 73 173 137 HOH HOH . 
D 3 HOH A 74 174 138 HOH HOH . 
D 3 HOH A 75 175 140 HOH HOH . 
D 3 HOH A 76 176 143 HOH HOH . 
D 3 HOH A 77 177 147 HOH HOH . 
D 3 HOH A 78 178 148 HOH HOH . 
D 3 HOH A 79 179 160 HOH HOH . 
D 3 HOH A 80 180 162 HOH HOH . 
E 3 HOH B 1 201 5 HOH HOH . 
E 3 HOH B 2 202 6 HOH HOH . 
E 3 HOH B 3 203 8 HOH HOH . 
E 3 HOH B 4 204 9 HOH HOH . 
E 3 HOH B 5 205 10 HOH HOH . 
E 3 HOH B 6 206 12 HOH HOH . 
E 3 HOH B 7 207 13 HOH HOH . 
E 3 HOH B 8 208 14 HOH HOH . 
E 3 HOH B 9 209 15 HOH HOH . 
E 3 HOH B 10 210 16 HOH HOH . 
E 3 HOH B 11 211 18 HOH HOH . 
E 3 HOH B 12 212 19 HOH HOH . 
E 3 HOH B 13 213 20 HOH HOH . 
E 3 HOH B 14 214 25 HOH HOH . 
E 3 HOH B 15 215 26 HOH HOH . 
E 3 HOH B 16 216 28 HOH HOH . 
E 3 HOH B 17 217 29 HOH HOH . 
E 3 HOH B 18 218 30 HOH HOH . 
E 3 HOH B 19 219 31 HOH HOH . 
E 3 HOH B 20 220 32 HOH HOH . 
E 3 HOH B 21 221 36 HOH HOH . 
E 3 HOH B 22 222 38 HOH HOH . 
E 3 HOH B 23 223 39 HOH HOH . 
E 3 HOH B 24 224 43 HOH HOH . 
E 3 HOH B 25 225 44 HOH HOH . 
E 3 HOH B 26 226 49 HOH HOH . 
E 3 HOH B 27 227 51 HOH HOH . 
E 3 HOH B 28 228 55 HOH HOH . 
E 3 HOH B 29 229 56 HOH HOH . 
E 3 HOH B 30 230 61 HOH HOH . 
E 3 HOH B 31 231 63 HOH HOH . 
E 3 HOH B 32 232 65 HOH HOH . 
E 3 HOH B 33 233 67 HOH HOH . 
E 3 HOH B 34 234 69 HOH HOH . 
E 3 HOH B 35 235 71 HOH HOH . 
E 3 HOH B 36 236 72 HOH HOH . 
E 3 HOH B 37 237 73 HOH HOH . 
E 3 HOH B 38 238 75 HOH HOH . 
E 3 HOH B 39 239 76 HOH HOH . 
E 3 HOH B 40 240 77 HOH HOH . 
E 3 HOH B 41 241 78 HOH HOH . 
E 3 HOH B 42 242 79 HOH HOH . 
E 3 HOH B 43 243 80 HOH HOH . 
E 3 HOH B 44 244 86 HOH HOH . 
E 3 HOH B 45 245 89 HOH HOH . 
E 3 HOH B 46 246 97 HOH HOH . 
E 3 HOH B 47 247 103 HOH HOH . 
E 3 HOH B 48 248 110 HOH HOH . 
E 3 HOH B 49 249 111 HOH HOH . 
E 3 HOH B 50 250 113 HOH HOH . 
E 3 HOH B 51 251 114 HOH HOH . 
E 3 HOH B 52 252 116 HOH HOH . 
E 3 HOH B 53 253 119 HOH HOH . 
E 3 HOH B 54 254 120 HOH HOH . 
E 3 HOH B 55 255 126 HOH HOH . 
E 3 HOH B 56 256 130 HOH HOH . 
E 3 HOH B 57 257 139 HOH HOH . 
E 3 HOH B 58 258 141 HOH HOH . 
E 3 HOH B 59 259 144 HOH HOH . 
E 3 HOH B 60 260 146 HOH HOH . 
E 3 HOH B 61 261 151 HOH HOH . 
E 3 HOH B 62 262 154 HOH HOH . 
E 3 HOH B 63 263 157 HOH HOH . 
E 3 HOH B 64 264 161 HOH HOH . 
E 3 HOH B 65 265 163 HOH HOH . 
E 3 HOH B 66 266 164 HOH HOH . 
E 3 HOH B 67 267 165 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 20.66 9.578 30.879 1 23.96 ? C1 GOL 101 B 1 
HETATM 2 O O1 GOL . . . C 2 19.84 9.942 31.896 1 24.02 ? O1 GOL 101 B 1 
HETATM 3 C C2 GOL . . . C 2 21.89 10.43 30.71 1 23.25 ? C2 GOL 101 B 1 
HETATM 4 O O2 GOL . . . C 2 22.791 9.545 31.202 1 23.4 ? O2 GOL 101 B 1 
HETATM 5 C C3 GOL . . . C 2 22.297 11.602 31.535 1 20.27 ? C3 GOL 101 B 1 
HETATM 6 O O3 GOL . . . C 2 23.018 12.613 30.905 1 20.9 ? O3 GOL 101 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           253 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#