data_4J8F # _model_server_result.job_id QQhEJH0q2RTHMTJQoT3XLQ _model_server_result.datetime_utc '2024-10-19 03:59:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j8f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 4J8F # _exptl.entry_id 4J8F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4J8F _cell.length_a 65.596 _cell.length_b 65.596 _cell.length_c 141.47 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J8F _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 1 1,2 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -y,x,z+1/4 0 -1 0 1 0 0 0 0 1 0 0 35.3675 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O2B ADP . A ADP 601 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? metalc ? metalc2 C MG MG . A MG 602 1_555 D O3 PO4 . A PO4 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc3 C MG MG . A MG 602 1_555 V O HOH . A HOH 722 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.884 ? metalc ? metalc4 C MG MG . A MG 602 1_555 V O HOH . A HOH 723 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc5 C MG MG . A MG 602 1_555 V O HOH . A HOH 724 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc6 C MG MG . A MG 602 1_555 V O HOH . A HOH 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4J8F _atom_sites.fract_transf_matrix[1][1] 0.015245 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015245 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007069 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 601 600 ADP ADP . C 3 MG A 1 602 650 MG MG . D 4 PO4 A 1 603 700 PO4 PO4 . E 5 IOD A 1 604 1 IOD IOD . F 5 IOD A 1 605 2 IOD IOD . G 5 IOD A 1 606 3 IOD IOD . H 5 IOD A 1 607 4 IOD IOD . I 5 IOD A 1 608 5 IOD IOD . J 5 IOD A 1 609 6 IOD IOD . K 5 IOD A 1 610 7 IOD IOD . L 5 IOD A 1 611 8 IOD IOD . M 5 IOD A 1 612 9 IOD IOD . N 5 IOD A 1 613 10 IOD IOD . O 5 IOD A 1 614 11 IOD IOD . P 5 IOD A 1 615 12 IOD IOD . Q 5 IOD A 1 616 13 IOD IOD . R 5 IOD A 1 617 14 IOD IOD . S 5 IOD A 1 618 15 IOD IOD . T 5 IOD A 1 619 16 IOD IOD . U 5 IOD A 1 620 17 IOD IOD . V 6 HOH A 1 701 1 HOH HOH . V 6 HOH A 2 702 2 HOH HOH . V 6 HOH A 3 703 3 HOH HOH . V 6 HOH A 4 704 4 HOH HOH . V 6 HOH A 5 705 5 HOH HOH . V 6 HOH A 6 706 6 HOH HOH . V 6 HOH A 7 707 7 HOH HOH . V 6 HOH A 8 708 8 HOH HOH . V 6 HOH A 9 709 9 HOH HOH . V 6 HOH A 10 710 10 HOH HOH . V 6 HOH A 11 711 11 HOH HOH . V 6 HOH A 12 712 12 HOH HOH . V 6 HOH A 13 713 13 HOH HOH . V 6 HOH A 14 714 14 HOH HOH . V 6 HOH A 15 715 15 HOH HOH . V 6 HOH A 16 716 16 HOH HOH . V 6 HOH A 17 717 17 HOH HOH . V 6 HOH A 18 718 18 HOH HOH . V 6 HOH A 19 719 19 HOH HOH . V 6 HOH A 20 720 20 HOH HOH . V 6 HOH A 21 721 21 HOH HOH . V 6 HOH A 22 722 22 HOH HOH . V 6 HOH A 23 723 23 HOH HOH . V 6 HOH A 24 724 24 HOH HOH . V 6 HOH A 25 725 25 HOH HOH . V 6 HOH A 26 726 26 HOH HOH . V 6 HOH A 27 727 27 HOH HOH . V 6 HOH A 28 728 28 HOH HOH . V 6 HOH A 29 729 29 HOH HOH . V 6 HOH A 30 730 30 HOH HOH . V 6 HOH A 31 731 31 HOH HOH . V 6 HOH A 32 732 32 HOH HOH . V 6 HOH A 33 733 33 HOH HOH . V 6 HOH A 34 734 34 HOH HOH . V 6 HOH A 35 735 35 HOH HOH . V 6 HOH A 36 736 36 HOH HOH . V 6 HOH A 37 737 37 HOH HOH . V 6 HOH A 38 738 38 HOH HOH . V 6 HOH A 39 739 39 HOH HOH . V 6 HOH A 40 740 40 HOH HOH . V 6 HOH A 41 741 41 HOH HOH . V 6 HOH A 42 742 42 HOH HOH . V 6 HOH A 43 743 43 HOH HOH . V 6 HOH A 44 744 44 HOH HOH . V 6 HOH A 45 745 45 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 18.512 _atom_site.Cartn_y -1.966 _atom_site.Cartn_z 1.833 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 602 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #