data_4J9C # _model_server_result.job_id mbJeH0fHL--7ShzwuFKwMQ _model_server_result.datetime_utc '2024-10-12 11:16:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4j9c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 4J9C # _exptl.entry_id 4J9C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4J9C _cell.length_a 49.646 _cell.length_b 49.646 _cell.length_c 45.41 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4J9C _symmetry.cell_setting ? _symmetry.Int_Tables_number 153 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 1 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id ACE _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id ACE _struct_conn.ptnr1_auth_seq_id 0 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id ALA _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id ALA _struct_conn.ptnr2_auth_seq_id 1 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.328 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 243 n n C1 C2 PEG sing 244 n n C1 H11 PEG sing 245 n n C1 H12 PEG sing 246 n n O1 HO1 PEG sing 247 n n C2 O2 PEG sing 248 n n C2 H21 PEG sing 249 n n C2 H22 PEG sing 250 n n O2 C3 PEG sing 251 n n C3 C4 PEG sing 252 n n C3 H31 PEG sing 253 n n C3 H32 PEG sing 254 n n C4 O4 PEG sing 255 n n C4 H41 PEG sing 256 n n C4 H42 PEG sing 257 n n O4 HO4 PEG sing 258 n n # _atom_sites.entry_id 4J9C _atom_sites.fract_transf_matrix[1][1] 0.020143 _atom_sites.fract_transf_matrix[1][2] 0.011629 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023259 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022022 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PGE A 1 201 1 PGE PGE . D 4 PEG A 1 202 2 PEG PEG . E 5 HOH A 1 301 1 HOH HOH . E 5 HOH A 2 302 2 HOH HOH . E 5 HOH A 3 303 3 HOH HOH . E 5 HOH A 4 304 4 HOH HOH . E 5 HOH A 5 305 5 HOH HOH . E 5 HOH A 6 306 6 HOH HOH . E 5 HOH A 7 307 7 HOH HOH . E 5 HOH A 8 308 8 HOH HOH . E 5 HOH A 9 309 9 HOH HOH . E 5 HOH A 10 310 10 HOH HOH . E 5 HOH A 11 311 12 HOH HOH . E 5 HOH A 12 312 14 HOH HOH . E 5 HOH A 13 313 15 HOH HOH . E 5 HOH A 14 314 17 HOH HOH . E 5 HOH A 15 315 18 HOH HOH . E 5 HOH A 16 316 19 HOH HOH . E 5 HOH A 17 317 20 HOH HOH . E 5 HOH A 18 318 22 HOH HOH . E 5 HOH A 19 319 23 HOH HOH . E 5 HOH A 20 320 25 HOH HOH . E 5 HOH A 21 321 27 HOH HOH . E 5 HOH A 22 322 28 HOH HOH . E 5 HOH A 23 323 29 HOH HOH . E 5 HOH A 24 324 30 HOH HOH . E 5 HOH A 25 325 32 HOH HOH . E 5 HOH A 26 326 33 HOH HOH . E 5 HOH A 27 327 34 HOH HOH . E 5 HOH A 28 328 35 HOH HOH . E 5 HOH A 29 329 36 HOH HOH . E 5 HOH A 30 330 38 HOH HOH . E 5 HOH A 31 331 39 HOH HOH . E 5 HOH A 32 332 40 HOH HOH . E 5 HOH A 33 333 41 HOH HOH . E 5 HOH A 34 334 42 HOH HOH . E 5 HOH A 35 335 43 HOH HOH . E 5 HOH A 36 336 44 HOH HOH . E 5 HOH A 37 337 47 HOH HOH . E 5 HOH A 38 338 48 HOH HOH . E 5 HOH A 39 339 49 HOH HOH . E 5 HOH A 40 340 50 HOH HOH . E 5 HOH A 41 341 51 HOH HOH . E 5 HOH A 42 342 52 HOH HOH . E 5 HOH A 43 343 53 HOH HOH . E 5 HOH A 44 344 54 HOH HOH . E 5 HOH A 45 345 55 HOH HOH . E 5 HOH A 46 346 56 HOH HOH . E 5 HOH A 47 347 58 HOH HOH . E 5 HOH A 48 348 60 HOH HOH . E 5 HOH A 49 349 61 HOH HOH . E 5 HOH A 50 350 63 HOH HOH . E 5 HOH A 51 351 64 HOH HOH . E 5 HOH A 52 352 67 HOH HOH . E 5 HOH A 53 353 69 HOH HOH . E 5 HOH A 54 354 70 HOH HOH . E 5 HOH A 55 355 72 HOH HOH . E 5 HOH A 56 356 74 HOH HOH . E 5 HOH A 57 357 76 HOH HOH . E 5 HOH A 58 358 77 HOH HOH . E 5 HOH A 59 359 81 HOH HOH . E 5 HOH A 60 360 83 HOH HOH . E 5 HOH A 61 361 85 HOH HOH . E 5 HOH A 62 362 86 HOH HOH . E 5 HOH A 63 363 87 HOH HOH . E 5 HOH A 64 364 16 HOH HOH . F 5 HOH B 1 101 11 HOH HOH . F 5 HOH B 2 102 13 HOH HOH . F 5 HOH B 3 103 21 HOH HOH . F 5 HOH B 4 104 24 HOH HOH . F 5 HOH B 5 105 26 HOH HOH . F 5 HOH B 6 106 31 HOH HOH . F 5 HOH B 7 107 37 HOH HOH . F 5 HOH B 8 108 45 HOH HOH . F 5 HOH B 9 109 46 HOH HOH . F 5 HOH B 10 110 57 HOH HOH . F 5 HOH B 11 111 59 HOH HOH . F 5 HOH B 12 112 62 HOH HOH . F 5 HOH B 13 113 68 HOH HOH . F 5 HOH B 14 114 75 HOH HOH . F 5 HOH B 15 115 78 HOH HOH . F 5 HOH B 16 116 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 4 14.999 16.929 7.351 1 15.21 ? C1 PEG 202 A 1 HETATM 2 O O1 PEG . . . D 4 15.698 18.031 7.787 1 12.79 ? O1 PEG 202 A 1 HETATM 3 C C2 PEG . . . D 4 15.795 15.716 7.68 1 16.41 ? C2 PEG 202 A 1 HETATM 4 O O2 PEG . . . D 4 16.889 15.628 6.84 1 17.72 ? O2 PEG 202 A 1 HETATM 5 C C3 PEG . . . D 4 17.697 14.51 6.951 1 20.52 ? C3 PEG 202 A 1 HETATM 6 C C4 PEG . . . D 4 18.75 14.552 5.898 1 22.47 ? C4 PEG 202 A 1 HETATM 7 O O4 PEG . . . D 4 19.629 15.578 6.183 1 25.49 ? O4 PEG 202 A 1 HETATM 8 H H11 PEG . . . D 4 14.134 16.885 7.794 1 18.26 ? H11 PEG 202 A 1 HETATM 9 H H12 PEG . . . D 4 14.869 16.982 6.388 1 18.26 ? H12 PEG 202 A 1 HETATM 10 H HO1 PEG . . . D 4 15.128 18.667 8.025 1 15.34 ? HO1 PEG 202 A 1 HETATM 11 H H21 PEG . . . D 4 16.096 15.765 8.604 1 19.69 ? H21 PEG 202 A 1 HETATM 12 H H22 PEG . . . D 4 15.239 14.926 7.564 1 19.69 ? H22 PEG 202 A 1 HETATM 13 H H31 PEG . . . D 4 18.121 14.518 7.826 1 24.62 ? H31 PEG 202 A 1 HETATM 14 H H32 PEG . . . D 4 17.168 13.699 6.854 1 24.62 ? H32 PEG 202 A 1 HETATM 15 H H41 PEG . . . D 4 19.232 13.707 5.885 1 26.97 ? H41 PEG 202 A 1 HETATM 16 H H42 PEG . . . D 4 18.338 14.706 5.03 1 26.97 ? H42 PEG 202 A 1 HETATM 17 H HO4 PEG . . . D 4 20.31 15.262 6.655 1 30.59 ? HO4 PEG 202 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 17 #