data_4J9G
#
_model_server_result.job_id            ubQtj88LEdyc9t_hnUCZmA 
_model_server_result.datetime_utc      '2024-11-22 07:23:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4j9g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":202}' 
#
_entry.id    4J9G 
#
_exptl.entry_id    4J9G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4J9G 
_cell.length_a            86.309 
_cell.length_b            86.309 
_cell.length_c            45.236 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4J9G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J 1 1 
C,D,K,L 2 1 
E,F,G,H,M,N 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             H 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C ACE 1 B ACE 0 1_555 B N ALA 2 B ALA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 D C ACE 1 D ACE 0 1_555 D N ALA 2 D ALA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
covale ? covale3 F C ACE 1 F ACE 0 1_555 F N ALA 2 F ALA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     4J9G 
_atom_sites.fract_transf_matrix[1][1]    0.011586 
_atom_sites.fract_transf_matrix[1][2]    0.006689 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013379 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022106 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 SO4 E 1 201 1 SO4 SO4 . 
H 4 GOL E 1 202 1 GOL GOL . 
I 5 HOH A 1 201 1 HOH HOH . 
I 5 HOH A 2 202 3 HOH HOH . 
I 5 HOH A 3 203 5 HOH HOH . 
I 5 HOH A 4 204 6 HOH HOH . 
I 5 HOH A 5 205 8 HOH HOH . 
I 5 HOH A 6 206 9 HOH HOH . 
I 5 HOH A 7 207 10 HOH HOH . 
I 5 HOH A 8 208 14 HOH HOH . 
I 5 HOH A 9 209 15 HOH HOH . 
I 5 HOH A 10 210 18 HOH HOH . 
I 5 HOH A 11 211 21 HOH HOH . 
I 5 HOH A 12 212 23 HOH HOH . 
I 5 HOH A 13 213 25 HOH HOH . 
I 5 HOH A 14 214 26 HOH HOH . 
I 5 HOH A 15 215 27 HOH HOH . 
I 5 HOH A 16 216 28 HOH HOH . 
I 5 HOH A 17 217 32 HOH HOH . 
I 5 HOH A 18 218 38 HOH HOH . 
I 5 HOH A 19 219 39 HOH HOH . 
I 5 HOH A 20 220 41 HOH HOH . 
I 5 HOH A 21 221 48 HOH HOH . 
I 5 HOH A 22 222 50 HOH HOH . 
I 5 HOH A 23 223 53 HOH HOH . 
I 5 HOH A 24 224 55 HOH HOH . 
I 5 HOH A 25 225 60 HOH HOH . 
I 5 HOH A 26 226 63 HOH HOH . 
I 5 HOH A 27 227 64 HOH HOH . 
I 5 HOH A 28 228 65 HOH HOH . 
I 5 HOH A 29 229 66 HOH HOH . 
I 5 HOH A 30 230 72 HOH HOH . 
I 5 HOH A 31 231 76 HOH HOH . 
I 5 HOH A 32 232 83 HOH HOH . 
I 5 HOH A 33 233 88 HOH HOH . 
J 5 HOH B 1 101 52 HOH HOH . 
J 5 HOH B 2 102 78 HOH HOH . 
J 5 HOH B 3 103 81 HOH HOH . 
J 5 HOH B 4 104 82 HOH HOH . 
K 5 HOH C 1 201 4 HOH HOH . 
K 5 HOH C 2 202 11 HOH HOH . 
K 5 HOH C 3 203 16 HOH HOH . 
K 5 HOH C 4 204 19 HOH HOH . 
K 5 HOH C 5 205 20 HOH HOH . 
K 5 HOH C 6 206 22 HOH HOH . 
K 5 HOH C 7 207 24 HOH HOH . 
K 5 HOH C 8 208 29 HOH HOH . 
K 5 HOH C 9 209 33 HOH HOH . 
K 5 HOH C 10 210 34 HOH HOH . 
K 5 HOH C 11 211 36 HOH HOH . 
K 5 HOH C 12 212 37 HOH HOH . 
K 5 HOH C 13 213 40 HOH HOH . 
K 5 HOH C 14 214 46 HOH HOH . 
K 5 HOH C 15 215 54 HOH HOH . 
K 5 HOH C 16 216 68 HOH HOH . 
K 5 HOH C 17 217 73 HOH HOH . 
K 5 HOH C 18 218 74 HOH HOH . 
K 5 HOH C 19 219 77 HOH HOH . 
K 5 HOH C 20 220 80 HOH HOH . 
K 5 HOH C 21 221 87 HOH HOH . 
L 5 HOH D 1 101 42 HOH HOH . 
M 5 HOH E 1 301 2 HOH HOH . 
M 5 HOH E 2 302 7 HOH HOH . 
M 5 HOH E 3 303 12 HOH HOH . 
M 5 HOH E 4 304 13 HOH HOH . 
M 5 HOH E 5 305 17 HOH HOH . 
M 5 HOH E 6 306 30 HOH HOH . 
M 5 HOH E 7 307 35 HOH HOH . 
M 5 HOH E 8 308 43 HOH HOH . 
M 5 HOH E 9 309 44 HOH HOH . 
M 5 HOH E 10 310 45 HOH HOH . 
M 5 HOH E 11 311 47 HOH HOH . 
M 5 HOH E 12 312 49 HOH HOH . 
M 5 HOH E 13 313 51 HOH HOH . 
M 5 HOH E 14 314 56 HOH HOH . 
M 5 HOH E 15 315 57 HOH HOH . 
M 5 HOH E 16 316 58 HOH HOH . 
M 5 HOH E 17 317 59 HOH HOH . 
M 5 HOH E 18 318 61 HOH HOH . 
M 5 HOH E 19 319 62 HOH HOH . 
M 5 HOH E 20 320 67 HOH HOH . 
M 5 HOH E 21 321 69 HOH HOH . 
M 5 HOH E 22 322 70 HOH HOH . 
M 5 HOH E 23 323 71 HOH HOH . 
M 5 HOH E 24 324 75 HOH HOH . 
M 5 HOH E 25 325 79 HOH HOH . 
M 5 HOH E 26 326 84 HOH HOH . 
M 5 HOH E 27 327 86 HOH HOH . 
M 5 HOH E 28 328 89 HOH HOH . 
N 5 HOH F 1 101 31 HOH HOH . 
N 5 HOH F 2 102 85 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 4 -31.949 26.29 8.254 1 36.66 ? C1 GOL 202 E 1 
HETATM 2 O O1 GOL . . . H 4 -32.405 27.151 7.245 1 32.16 ? O1 GOL 202 E 1 
HETATM 3 C C2 GOL . . . H 4 -33.109 25.435 8.765 1 32.17 ? C2 GOL 202 E 1 
HETATM 4 O O2 GOL . . . H 4 -33.971 25.06 7.695 1 37.52 ? O2 GOL 202 E 1 
HETATM 5 C C3 GOL . . . H 4 -32.478 24.159 9.294 1 32.9 ? C3 GOL 202 E 1 
HETATM 6 O O3 GOL . . . H 4 -33.499 23.291 9.715 1 43.03 ? O3 GOL 202 E 1 
HETATM 7 H H31 GOL . . . H 4 -31.818 24.391 10.13 1 39.48 ? H31 GOL 202 E 1 
HETATM 8 H H32 GOL . . . H 4 -31.886 23.685 8.511 1 39.48 ? H32 GOL 202 E 1 
HETATM 9 H HO3 GOL . . . H 4 -33.975 23.69 10.473 1 51.64 ? HO3 GOL 202 E 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           9 
#