data_4JB0 # _model_server_result.job_id aKI1ZjmpI9G5HyIaOzojIg _model_server_result.datetime_utc '2024-11-28 09:18:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jb0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 4JB0 # _exptl.entry_id 4JB0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.157 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(4-HYDROXY-PHENYL)PYRUVIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment 'Aromatic Ligand' _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JB0 _cell.length_a 42.97 _cell.length_b 70.74 _cell.length_c 105.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JB0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H8 O4' _chem_comp.formula_weight 180.157 _chem_comp.id ENO _chem_comp.mon_nstd_flag . _chem_comp.name '3-(4-HYDROXY-PHENYL)PYRUVIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HPP # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C2 ENO doub 70 n n C9 C8 ENO doub 71 n y C9 C4 ENO sing 72 n y C9 H9 ENO sing 73 n n C8 C7 ENO sing 74 n y C8 H8 ENO sing 75 n n C7 C6 ENO doub 76 n y C7 O3 ENO sing 77 n n C6 C5 ENO sing 78 n y C6 H6 ENO sing 79 n n C5 C4 ENO doub 80 n y C5 H5 ENO sing 81 n n C4 C3 ENO sing 82 n n O3 HO3 ENO sing 83 n n C3 C2 ENO sing 84 n n C3 H31 ENO sing 85 n n C3 H32 ENO sing 86 n n C2 C1 ENO sing 87 n n C1 O2 ENO doub 88 n n C1 O1 ENO sing 89 n n O1 HO1 ENO sing 90 n n # _atom_sites.entry_id 4JB0 _atom_sites.fract_transf_matrix[1][1] 0.023272 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014136 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009497 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FER A 1 401 1 FER FEU . C 3 ENO A 1 402 1 ENO ENO . D 4 GOL A 1 403 1 GOL GOL . E 5 HOH A 1 501 1 HOH HOH . E 5 HOH A 2 502 2 HOH HOH . E 5 HOH A 3 503 3 HOH HOH . E 5 HOH A 4 504 4 HOH HOH . E 5 HOH A 5 505 5 HOH HOH . E 5 HOH A 6 506 6 HOH HOH . E 5 HOH A 7 507 7 HOH HOH . E 5 HOH A 8 508 8 HOH HOH . E 5 HOH A 9 509 9 HOH HOH . E 5 HOH A 10 510 10 HOH HOH . E 5 HOH A 11 511 11 HOH HOH . E 5 HOH A 12 512 12 HOH HOH . E 5 HOH A 13 513 13 HOH HOH . E 5 HOH A 14 514 14 HOH HOH . E 5 HOH A 15 515 15 HOH HOH . E 5 HOH A 16 516 16 HOH HOH . E 5 HOH A 17 517 17 HOH HOH . E 5 HOH A 18 518 18 HOH HOH . E 5 HOH A 19 519 19 HOH HOH . E 5 HOH A 20 520 20 HOH HOH . E 5 HOH A 21 521 21 HOH HOH . E 5 HOH A 22 522 22 HOH HOH . E 5 HOH A 23 523 23 HOH HOH . E 5 HOH A 24 524 24 HOH HOH . E 5 HOH A 25 525 25 HOH HOH . E 5 HOH A 26 526 26 HOH HOH . E 5 HOH A 27 527 27 HOH HOH . E 5 HOH A 28 528 28 HOH HOH . E 5 HOH A 29 529 29 HOH HOH . E 5 HOH A 30 530 30 HOH HOH . E 5 HOH A 31 531 31 HOH HOH . E 5 HOH A 32 532 32 HOH HOH . E 5 HOH A 33 533 33 HOH HOH . E 5 HOH A 34 534 34 HOH HOH . E 5 HOH A 35 535 35 HOH HOH . E 5 HOH A 36 536 36 HOH HOH . E 5 HOH A 37 537 37 HOH HOH . E 5 HOH A 38 538 38 HOH HOH . E 5 HOH A 39 539 39 HOH HOH . E 5 HOH A 40 540 40 HOH HOH . E 5 HOH A 41 541 41 HOH HOH . E 5 HOH A 42 542 42 HOH HOH . E 5 HOH A 43 543 43 HOH HOH . E 5 HOH A 44 544 44 HOH HOH . E 5 HOH A 45 545 45 HOH HOH . E 5 HOH A 46 546 46 HOH HOH . E 5 HOH A 47 547 47 HOH HOH . E 5 HOH A 48 548 48 HOH HOH . E 5 HOH A 49 549 49 HOH HOH . E 5 HOH A 50 550 50 HOH HOH . E 5 HOH A 51 551 51 HOH HOH . E 5 HOH A 52 552 52 HOH HOH . E 5 HOH A 53 553 53 HOH HOH . E 5 HOH A 54 554 54 HOH HOH . E 5 HOH A 55 555 55 HOH HOH . E 5 HOH A 56 556 56 HOH HOH . E 5 HOH A 57 557 57 HOH HOH . E 5 HOH A 58 558 58 HOH HOH . E 5 HOH A 59 559 59 HOH HOH . E 5 HOH A 60 560 60 HOH HOH . E 5 HOH A 61 561 62 HOH HOH . E 5 HOH A 62 562 63 HOH HOH . E 5 HOH A 63 563 64 HOH HOH . E 5 HOH A 64 564 65 HOH HOH . E 5 HOH A 65 565 66 HOH HOH . E 5 HOH A 66 566 67 HOH HOH . E 5 HOH A 67 567 68 HOH HOH . E 5 HOH A 68 568 69 HOH HOH . E 5 HOH A 69 569 70 HOH HOH . E 5 HOH A 70 570 71 HOH HOH . E 5 HOH A 71 571 72 HOH HOH . E 5 HOH A 72 572 73 HOH HOH . E 5 HOH A 73 573 74 HOH HOH . E 5 HOH A 74 574 75 HOH HOH . E 5 HOH A 75 575 76 HOH HOH . E 5 HOH A 76 576 77 HOH HOH . E 5 HOH A 77 577 78 HOH HOH . E 5 HOH A 78 578 79 HOH HOH . E 5 HOH A 79 579 80 HOH HOH . E 5 HOH A 80 580 81 HOH HOH . E 5 HOH A 81 581 82 HOH HOH . E 5 HOH A 82 582 83 HOH HOH . E 5 HOH A 83 583 85 HOH HOH . E 5 HOH A 84 584 86 HOH HOH . E 5 HOH A 85 585 87 HOH HOH . E 5 HOH A 86 586 88 HOH HOH . E 5 HOH A 87 587 89 HOH HOH . E 5 HOH A 88 588 90 HOH HOH . E 5 HOH A 89 589 91 HOH HOH . E 5 HOH A 90 590 92 HOH HOH . E 5 HOH A 91 591 93 HOH HOH . E 5 HOH A 92 592 94 HOH HOH . E 5 HOH A 93 593 95 HOH HOH . E 5 HOH A 94 594 96 HOH HOH . E 5 HOH A 95 595 97 HOH HOH . E 5 HOH A 96 596 98 HOH HOH . E 5 HOH A 97 597 99 HOH HOH . E 5 HOH A 98 598 100 HOH HOH . E 5 HOH A 99 599 101 HOH HOH . E 5 HOH A 100 600 102 HOH HOH . E 5 HOH A 101 601 103 HOH HOH . E 5 HOH A 102 602 104 HOH HOH . E 5 HOH A 103 603 105 HOH HOH . E 5 HOH A 104 604 106 HOH HOH . E 5 HOH A 105 605 107 HOH HOH . E 5 HOH A 106 606 108 HOH HOH . E 5 HOH A 107 607 109 HOH HOH . E 5 HOH A 108 608 110 HOH HOH . E 5 HOH A 109 609 111 HOH HOH . E 5 HOH A 110 610 112 HOH HOH . E 5 HOH A 111 611 113 HOH HOH . E 5 HOH A 112 612 114 HOH HOH . E 5 HOH A 113 613 115 HOH HOH . E 5 HOH A 114 614 116 HOH HOH . E 5 HOH A 115 615 117 HOH HOH . E 5 HOH A 116 616 118 HOH HOH . E 5 HOH A 117 617 119 HOH HOH . E 5 HOH A 118 618 120 HOH HOH . E 5 HOH A 119 619 121 HOH HOH . E 5 HOH A 120 620 122 HOH HOH . E 5 HOH A 121 621 123 HOH HOH . E 5 HOH A 122 622 124 HOH HOH . E 5 HOH A 123 623 125 HOH HOH . E 5 HOH A 124 624 126 HOH HOH . E 5 HOH A 125 625 127 HOH HOH . E 5 HOH A 126 626 128 HOH HOH . E 5 HOH A 127 627 129 HOH HOH . E 5 HOH A 128 628 130 HOH HOH . E 5 HOH A 129 629 131 HOH HOH . E 5 HOH A 130 630 132 HOH HOH . E 5 HOH A 131 631 133 HOH HOH . E 5 HOH A 132 632 134 HOH HOH . E 5 HOH A 133 633 135 HOH HOH . E 5 HOH A 134 634 136 HOH HOH . E 5 HOH A 135 635 137 HOH HOH . E 5 HOH A 136 636 138 HOH HOH . E 5 HOH A 137 637 139 HOH HOH . E 5 HOH A 138 638 140 HOH HOH . E 5 HOH A 139 639 141 HOH HOH . E 5 HOH A 140 640 142 HOH HOH . E 5 HOH A 141 641 143 HOH HOH . E 5 HOH A 142 642 144 HOH HOH . E 5 HOH A 143 643 145 HOH HOH . E 5 HOH A 144 644 146 HOH HOH . E 5 HOH A 145 645 147 HOH HOH . E 5 HOH A 146 646 148 HOH HOH . E 5 HOH A 147 647 150 HOH HOH . E 5 HOH A 148 648 151 HOH HOH . E 5 HOH A 149 649 152 HOH HOH . E 5 HOH A 150 650 153 HOH HOH . E 5 HOH A 151 651 154 HOH HOH . E 5 HOH A 152 652 155 HOH HOH . E 5 HOH A 153 653 156 HOH HOH . E 5 HOH A 154 654 157 HOH HOH . E 5 HOH A 155 655 158 HOH HOH . E 5 HOH A 156 656 159 HOH HOH . E 5 HOH A 157 657 160 HOH HOH . E 5 HOH A 158 658 161 HOH HOH . E 5 HOH A 159 659 162 HOH HOH . E 5 HOH A 160 660 163 HOH HOH . E 5 HOH A 161 661 164 HOH HOH . E 5 HOH A 162 662 165 HOH HOH . E 5 HOH A 163 663 166 HOH HOH . E 5 HOH A 164 664 167 HOH HOH . E 5 HOH A 165 665 168 HOH HOH . E 5 HOH A 166 666 169 HOH HOH . E 5 HOH A 167 667 170 HOH HOH . E 5 HOH A 168 668 171 HOH HOH . E 5 HOH A 169 669 172 HOH HOH . E 5 HOH A 170 670 173 HOH HOH . E 5 HOH A 171 671 174 HOH HOH . E 5 HOH A 172 672 175 HOH HOH . E 5 HOH A 173 673 176 HOH HOH . E 5 HOH A 174 674 177 HOH HOH . E 5 HOH A 175 675 178 HOH HOH . E 5 HOH A 176 676 179 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 ENO . . . C 3 0.768 5.942 -16.249 0.2 2 ? O4 ENO 402 A 1 HETATM 2 C C9 ENO . . . C 3 -2.516 4.97 -16.226 0.2 6.49 ? C9 ENO 402 A 1 HETATM 3 C C8 ENO . . . C 3 -3.246 3.866 -15.791 0.2 6 ? C8 ENO 402 A 1 HETATM 4 C C7 ENO . . . C 3 -3.512 3.708 -14.438 0.2 6.23 ? C7 ENO 402 A 1 HETATM 5 C C6 ENO . . . C 3 -3.05 4.654 -13.532 0.2 7.09 ? C6 ENO 402 A 1 HETATM 6 C C5 ENO . . . C 3 -2.321 5.759 -13.978 0.2 7.75 ? C5 ENO 402 A 1 HETATM 7 C C4 ENO . . . C 3 -2.035 5.912 -15.328 0.2 6.78 ? C4 ENO 402 A 1 HETATM 8 O O3 ENO . . . C 3 -4.218 2.633 -13.992 0.2 5.42 ? O3 ENO 402 A 1 HETATM 9 C C3 ENO . . . C 3 -1.262 7.14 -15.788 0.2 6.2 ? C3 ENO 402 A 1 HETATM 10 C C2 ENO . . . C 3 0.098 6.935 -16.431 0.2 4.91 ? C2 ENO 402 A 1 HETATM 11 C C1 ENO . . . C 3 0.66 8.008 -17.255 0.2 5.61 ? C1 ENO 402 A 1 HETATM 12 O O2 ENO . . . C 3 -0.093 8.86 -17.777 0.2 6.31 ? O2 ENO 402 A 1 HETATM 13 O O1 ENO . . . C 3 1.902 8.061 -17.376 0.2 5.59 ? O1 ENO 402 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #