data_4JC4 # _model_server_result.job_id yRqHBRVTJWNtrnlvFJPTbw _model_server_result.datetime_utc '2024-12-01 18:40:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jc4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4JC4 # _exptl.entry_id 4JC4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4JC4 _cell.length_a 62.604 _cell.length_b 62.604 _cell.length_c 155.392 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JC4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 4JC4 _atom_sites.fract_transf_matrix[1][1] 0.015973 _atom_sites.fract_transf_matrix[1][2] 0.009222 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018445 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006435 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 202 GOL GOL . C 3 HOH A 1 301 301 HOH HOH . C 3 HOH A 2 302 302 HOH HOH . C 3 HOH A 3 303 303 HOH HOH . C 3 HOH A 4 304 304 HOH HOH . C 3 HOH A 5 305 305 HOH HOH . C 3 HOH A 6 306 306 HOH HOH . C 3 HOH A 7 307 307 HOH HOH . C 3 HOH A 8 308 309 HOH HOH . C 3 HOH A 9 309 311 HOH HOH . C 3 HOH A 10 310 313 HOH HOH . C 3 HOH A 11 311 314 HOH HOH . C 3 HOH A 12 312 315 HOH HOH . C 3 HOH A 13 313 316 HOH HOH . C 3 HOH A 14 314 317 HOH HOH . C 3 HOH A 15 315 318 HOH HOH . C 3 HOH A 16 316 319 HOH HOH . C 3 HOH A 17 317 320 HOH HOH . C 3 HOH A 18 318 321 HOH HOH . C 3 HOH A 19 319 322 HOH HOH . C 3 HOH A 20 320 325 HOH HOH . C 3 HOH A 21 321 326 HOH HOH . C 3 HOH A 22 322 327 HOH HOH . C 3 HOH A 23 323 328 HOH HOH . C 3 HOH A 24 324 329 HOH HOH . C 3 HOH A 25 325 330 HOH HOH . C 3 HOH A 26 326 331 HOH HOH . C 3 HOH A 27 327 332 HOH HOH . C 3 HOH A 28 328 333 HOH HOH . C 3 HOH A 29 329 334 HOH HOH . C 3 HOH A 30 330 335 HOH HOH . C 3 HOH A 31 331 336 HOH HOH . C 3 HOH A 32 332 337 HOH HOH . C 3 HOH A 33 333 338 HOH HOH . C 3 HOH A 34 334 339 HOH HOH . C 3 HOH A 35 335 340 HOH HOH . C 3 HOH A 36 336 341 HOH HOH . C 3 HOH A 37 337 342 HOH HOH . C 3 HOH A 38 338 343 HOH HOH . C 3 HOH A 39 339 344 HOH HOH . C 3 HOH A 40 340 345 HOH HOH . C 3 HOH A 41 341 346 HOH HOH . C 3 HOH A 42 342 347 HOH HOH . C 3 HOH A 43 343 348 HOH HOH . C 3 HOH A 44 344 350 HOH HOH . C 3 HOH A 45 345 351 HOH HOH . C 3 HOH A 46 346 352 HOH HOH . C 3 HOH A 47 347 353 HOH HOH . C 3 HOH A 48 348 354 HOH HOH . C 3 HOH A 49 349 355 HOH HOH . C 3 HOH A 50 350 356 HOH HOH . C 3 HOH A 51 351 357 HOH HOH . C 3 HOH A 52 352 358 HOH HOH . C 3 HOH A 53 353 359 HOH HOH . C 3 HOH A 54 354 360 HOH HOH . C 3 HOH A 55 355 361 HOH HOH . C 3 HOH A 56 356 362 HOH HOH . C 3 HOH A 57 357 363 HOH HOH . C 3 HOH A 58 358 364 HOH HOH . C 3 HOH A 59 359 365 HOH HOH . C 3 HOH A 60 360 366 HOH HOH . C 3 HOH A 61 361 367 HOH HOH . C 3 HOH A 62 362 368 HOH HOH . C 3 HOH A 63 363 369 HOH HOH . C 3 HOH A 64 364 370 HOH HOH . C 3 HOH A 65 365 371 HOH HOH . C 3 HOH A 66 366 372 HOH HOH . C 3 HOH A 67 367 373 HOH HOH . C 3 HOH A 68 368 374 HOH HOH . C 3 HOH A 69 369 375 HOH HOH . C 3 HOH A 70 370 376 HOH HOH . C 3 HOH A 71 371 379 HOH HOH . C 3 HOH A 72 372 380 HOH HOH . C 3 HOH A 73 373 381 HOH HOH . C 3 HOH A 74 374 382 HOH HOH . C 3 HOH A 75 375 383 HOH HOH . C 3 HOH A 76 376 385 HOH HOH . C 3 HOH A 77 377 386 HOH HOH . C 3 HOH A 78 378 387 HOH HOH . C 3 HOH A 79 379 389 HOH HOH . C 3 HOH A 80 380 390 HOH HOH . C 3 HOH A 81 381 392 HOH HOH . C 3 HOH A 82 382 393 HOH HOH . C 3 HOH A 83 383 394 HOH HOH . C 3 HOH A 84 384 395 HOH HOH . C 3 HOH A 85 385 397 HOH HOH . C 3 HOH A 86 386 398 HOH HOH . C 3 HOH A 87 387 399 HOH HOH . C 3 HOH A 88 388 400 HOH HOH . C 3 HOH A 89 389 401 HOH HOH . C 3 HOH A 90 390 402 HOH HOH . C 3 HOH A 91 391 403 HOH HOH . C 3 HOH A 92 392 404 HOH HOH . C 3 HOH A 93 393 405 HOH HOH . C 3 HOH A 94 394 406 HOH HOH . C 3 HOH A 95 395 407 HOH HOH . C 3 HOH A 96 396 2 HOH HOH . C 3 HOH A 97 397 4 HOH HOH . C 3 HOH A 98 398 5 HOH HOH . C 3 HOH A 99 399 6 HOH HOH . C 3 HOH A 100 400 7 HOH HOH . C 3 HOH A 101 401 8 HOH HOH . C 3 HOH A 102 402 9 HOH HOH . C 3 HOH A 103 403 10 HOH HOH . C 3 HOH A 104 404 11 HOH HOH . C 3 HOH A 105 405 13 HOH HOH . C 3 HOH A 106 406 14 HOH HOH . C 3 HOH A 107 407 15 HOH HOH . C 3 HOH A 108 408 16 HOH HOH . C 3 HOH A 109 409 17 HOH HOH . C 3 HOH A 110 410 18 HOH HOH . C 3 HOH A 111 411 19 HOH HOH . C 3 HOH A 112 412 501 HOH HOH . C 3 HOH A 113 413 502 HOH HOH . C 3 HOH A 114 414 503 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 5.755 -14.474 -8.898 1 37.91 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . B 2 6.981 -15.239 -8.946 1 34.4 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . B 2 5.778 -13.053 -9.428 1 31.47 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . B 2 6.018 -12.15 -8.249 1 46 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . B 2 4.539 -12.502 -10.211 1 34.9 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . B 2 3.405 -13.192 -10.955 1 32.15 ? O3 GOL 201 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 232 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #