data_4JD8
#
_model_server_result.job_id            YSDR24oIQWrjrAUSO0pvxA 
_model_server_result.datetime_utc      '2025-03-03 00:40:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4jd8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":103}' 
#
_entry.id    4JD8 
#
_exptl.entry_id    4JD8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              39.098 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'POTASSIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4JD8 
_cell.length_a            37.55 
_cell.length_b            37.55 
_cell.length_c            54.371 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4JD8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OP1 DC 4 B DC 4 1_555 E K K . B K 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? 
metalc ? metalc2 E K K . B K 103 1_555 G O HOH . B HOH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.884 ? 
metalc ? metalc3 E K K . B K 103 1_555 G O HOH . B HOH 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.986 ? 
metalc ? metalc4 E K K . B K 103 1_555 G O HOH . B HOH 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? 
metalc ? metalc5 E K K . B K 103 1_555 G O HOH . B HOH 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? 
hydrog WATSON-CRICK hydrog1 A N1 DA 1 A DA 1 1_555 B N3 DT 6 B DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N6 DA 1 A DA 1 1_555 B O4 DT 6 B DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A N3 DT 2 A DT 2 1_555 B N1 DA 5 B DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A O4 DT 2 A DT 2 1_555 B N6 DA 5 B DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N1 DG 3 A DG 3 1_555 B N3 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A N2 DG 3 A DG 3 1_555 B O2 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A O6 DG 3 A DG 3 1_555 B N4 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A N3 DC 4 A DC 4 1_555 B N1 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A N4 DC 4 A DC 4 1_555 B O6 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A O2 DC 4 A DC 4 1_555 B N2 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N1 DA 5 A DA 5 1_555 B N3 DT 2 B DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A N6 DA 5 A DA 5 1_555 B O4 DT 2 B DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N3 DT 6 A DT 6 1_555 B N1 DA 1 B DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A O4 DT 6 A DT 6 1_555 B N6 DA 1 B DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'K 1' 
_chem_comp.formula_weight    39.098 
_chem_comp.id                K 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'POTASSIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4JD8 
_atom_sites.fract_transf_matrix[1][1]    0.026631 
_atom_sites.fract_transf_matrix[1][2]    0.015376 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.030751 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018392 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 0TN B 1 101 1 0TN 0TN . 
D 3 RKP B 1 102 1 RKP RKP . 
E 4 K B 1 103 2 K K . 
F 5 HOH A 1 101 3 HOH HOH . 
F 5 HOH A 2 102 4 HOH HOH . 
F 5 HOH A 3 103 6 HOH HOH . 
F 5 HOH A 4 104 8 HOH HOH . 
F 5 HOH A 5 105 11 HOH HOH . 
F 5 HOH A 6 106 15 HOH HOH . 
F 5 HOH A 7 107 17 HOH HOH . 
F 5 HOH A 8 108 18 HOH HOH . 
F 5 HOH A 9 109 19 HOH HOH . 
F 5 HOH A 10 110 21 HOH HOH . 
F 5 HOH A 11 111 22 HOH HOH . 
F 5 HOH A 12 112 25 HOH HOH . 
F 5 HOH A 13 113 28 HOH HOH . 
F 5 HOH A 14 114 29 HOH HOH . 
F 5 HOH A 15 115 30 HOH HOH . 
F 5 HOH A 16 116 31 HOH HOH . 
F 5 HOH A 17 117 32 HOH HOH . 
F 5 HOH A 18 118 36 HOH HOH . 
F 5 HOH A 19 119 38 HOH HOH . 
F 5 HOH A 20 120 39 HOH HOH . 
F 5 HOH A 21 121 40 HOH HOH . 
F 5 HOH A 22 122 42 HOH HOH . 
F 5 HOH A 23 123 44 HOH HOH . 
F 5 HOH A 24 124 45 HOH HOH . 
F 5 HOH A 25 125 47 HOH HOH . 
F 5 HOH A 26 126 50 HOH HOH . 
F 5 HOH A 27 127 51 HOH HOH . 
F 5 HOH A 28 128 53 HOH HOH . 
F 5 HOH A 29 129 54 HOH HOH . 
F 5 HOH A 30 130 57 HOH HOH . 
F 5 HOH A 31 131 59 HOH HOH . 
F 5 HOH A 32 132 61 HOH HOH . 
F 5 HOH A 33 133 64 HOH HOH . 
F 5 HOH A 34 134 66 HOH HOH . 
F 5 HOH A 35 135 71 HOH HOH . 
F 5 HOH A 36 136 73 HOH HOH . 
F 5 HOH A 37 137 77 HOH HOH . 
F 5 HOH A 38 138 78 HOH HOH . 
F 5 HOH A 39 139 79 HOH HOH . 
F 5 HOH A 40 140 82 HOH HOH . 
F 5 HOH A 41 141 84 HOH HOH . 
F 5 HOH A 42 142 85 HOH HOH . 
G 5 HOH B 1 201 1 HOH HOH . 
G 5 HOH B 2 202 2 HOH HOH . 
G 5 HOH B 3 203 5 HOH HOH . 
G 5 HOH B 4 204 7 HOH HOH . 
G 5 HOH B 5 205 9 HOH HOH . 
G 5 HOH B 6 206 10 HOH HOH . 
G 5 HOH B 7 207 12 HOH HOH . 
G 5 HOH B 8 208 13 HOH HOH . 
G 5 HOH B 9 209 14 HOH HOH . 
G 5 HOH B 10 210 16 HOH HOH . 
G 5 HOH B 11 211 20 HOH HOH . 
G 5 HOH B 12 212 23 HOH HOH . 
G 5 HOH B 13 213 24 HOH HOH . 
G 5 HOH B 14 214 26 HOH HOH . 
G 5 HOH B 15 215 27 HOH HOH . 
G 5 HOH B 16 216 33 HOH HOH . 
G 5 HOH B 17 217 34 HOH HOH . 
G 5 HOH B 18 218 35 HOH HOH . 
G 5 HOH B 19 219 37 HOH HOH . 
G 5 HOH B 20 220 41 HOH HOH . 
G 5 HOH B 21 221 43 HOH HOH . 
G 5 HOH B 22 222 46 HOH HOH . 
G 5 HOH B 23 223 48 HOH HOH . 
G 5 HOH B 24 224 49 HOH HOH . 
G 5 HOH B 25 225 52 HOH HOH . 
G 5 HOH B 26 226 55 HOH HOH . 
G 5 HOH B 27 227 56 HOH HOH . 
G 5 HOH B 28 228 58 HOH HOH . 
G 5 HOH B 29 229 60 HOH HOH . 
G 5 HOH B 30 230 62 HOH HOH . 
G 5 HOH B 31 231 63 HOH HOH . 
G 5 HOH B 32 232 65 HOH HOH . 
G 5 HOH B 33 233 67 HOH HOH . 
G 5 HOH B 34 234 68 HOH HOH . 
G 5 HOH B 35 235 69 HOH HOH . 
G 5 HOH B 36 236 70 HOH HOH . 
G 5 HOH B 37 237 72 HOH HOH . 
G 5 HOH B 38 238 74 HOH HOH . 
G 5 HOH B 39 239 75 HOH HOH . 
G 5 HOH B 40 240 76 HOH HOH . 
G 5 HOH B 41 241 80 HOH HOH . 
G 5 HOH B 42 242 81 HOH HOH . 
G 5 HOH B 43 243 83 HOH HOH . 
G 5 HOH B 44 244 86 HOH HOH . 
G 5 HOH B 45 245 87 HOH HOH . 
G 5 HOH B 46 246 88 HOH HOH . 
G 5 HOH B 47 247 89 HOH HOH . 
G 5 HOH B 48 248 248 HOH HOH . 
G 5 HOH B 49 249 91 HOH HOH . 
G 5 HOH B 50 250 92 HOH HOH . 
G 5 HOH B 51 251 93 HOH HOH . 
G 5 HOH B 52 252 94 HOH HOH . 
G 5 HOH B 53 253 95 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           K 
_atom_site.label_atom_id         K 
_atom_site.label_comp_id         K 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -16.464 
_atom_site.Cartn_y               0.033 
_atom_site.Cartn_z               -9.107 
_atom_site.occupancy             0.58 
_atom_site.B_iso_or_equiv        15.4 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          K 
_atom_site.auth_comp_id          K 
_atom_site.auth_seq_id           103 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           345 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#