data_4JFD
#
_model_server_result.job_id            SPIJC_I6SU2VOUOScy1ucA 
_model_server_result.datetime_utc      '2024-12-17 18:36:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4jfd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":301}' 
#
_entry.id    4JFD 
#
_exptl.entry_id    4JFD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              163.215 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            TRIS(HYDROXYETHYL)AMINOMETHANE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4JFD 
_cell.length_a            121.49 
_cell.length_b            121.49 
_cell.length_c            82.96 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4JFD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
disulf ? disulf4 D SG CYS 23 D CYS 23 1_555 D SG CYS 89 D CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
disulf ? disulf5 D SG CYS 132 D CYS 132 1_555 D SG CYS 182 D CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
disulf ? disulf6 D SG CYS 157 D CYS 157 1_555 E SG CYS 172 E CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
disulf ? disulf7 E SG CYS 24 E CYS 23 1_555 E SG CYS 92 E CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf8 E SG CYS 146 E CYS 145 1_555 E SG CYS 211 E CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
#
_chem_comp.formula           'C7 H17 N O3' 
_chem_comp.formula_weight    163.215 
_chem_comp.id                TAM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              TRIS(HYDROXYETHYL)AMINOMETHANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TAM sing 294 n n 
C C2 TAM sing 295 n n 
C C3 TAM sing 296 n n 
C N TAM sing 297 n n 
C1 C4 TAM sing 298 n n 
C1 H11 TAM sing 299 n n 
C1 H12 TAM sing 300 n n 
C2 C5 TAM sing 301 n n 
C2 H21 TAM sing 302 n n 
C2 H22 TAM sing 303 n n 
C3 C6 TAM sing 304 n n 
C3 H31 TAM sing 305 n n 
C3 H32 TAM sing 306 n n 
C4 O4 TAM sing 307 n n 
C4 H41 TAM sing 308 n n 
C4 H42 TAM sing 309 n n 
C5 O5 TAM sing 310 n n 
C5 H51 TAM sing 311 n n 
C5 H52 TAM sing 312 n n 
C6 O6 TAM sing 313 n n 
C6 H61 TAM sing 314 n n 
C6 H62 TAM sing 315 n n 
N HN1 TAM sing 316 n n 
N HN2 TAM sing 317 n n 
O4 HO4 TAM sing 318 n n 
O5 HO5 TAM sing 319 n n 
O6 HO6 TAM sing 320 n n 
#
_atom_sites.entry_id                     4JFD 
_atom_sites.fract_transf_matrix[1][1]    0.008231 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008231 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012054 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 TAM A 1 301 301 TAM TAM . 
G 7 SO4 A 1 302 311 SO4 SO4 . 
H 7 SO4 A 1 303 312 SO4 SO4 . 
I 7 SO4 A 1 304 313 SO4 SO4 . 
J 7 SO4 A 1 305 315 SO4 SO4 . 
K 7 SO4 A 1 306 317 SO4 SO4 . 
L 7 SO4 E 1 301 314 SO4 SO4 . 
M 7 SO4 E 1 302 316 SO4 SO4 . 
N 7 SO4 E 1 303 318 SO4 SO4 . 
O 7 SO4 E 1 304 319 SO4 SO4 . 
P 7 SO4 E 1 305 320 SO4 SO4 . 
Q 7 SO4 E 1 306 321 SO4 SO4 . 
R 8 HOH A 1 401 404 HOH HOH . 
R 8 HOH A 2 402 405 HOH HOH . 
R 8 HOH A 3 403 410 HOH HOH . 
R 8 HOH A 4 404 411 HOH HOH . 
R 8 HOH A 5 405 412 HOH HOH . 
R 8 HOH A 6 406 417 HOH HOH . 
R 8 HOH A 7 407 424 HOH HOH . 
R 8 HOH A 8 408 430 HOH HOH . 
R 8 HOH A 9 409 435 HOH HOH . 
R 8 HOH A 10 410 437 HOH HOH . 
R 8 HOH A 11 411 439 HOH HOH . 
R 8 HOH A 12 412 450 HOH HOH . 
R 8 HOH A 13 413 452 HOH HOH . 
R 8 HOH A 14 414 456 HOH HOH . 
R 8 HOH A 15 415 458 HOH HOH . 
R 8 HOH A 16 416 461 HOH HOH . 
R 8 HOH A 17 417 464 HOH HOH . 
R 8 HOH A 18 418 466 HOH HOH . 
R 8 HOH A 19 419 471 HOH HOH . 
R 8 HOH A 20 420 475 HOH HOH . 
R 8 HOH A 21 421 476 HOH HOH . 
R 8 HOH A 22 422 483 HOH HOH . 
R 8 HOH A 23 423 486 HOH HOH . 
R 8 HOH A 24 424 490 HOH HOH . 
R 8 HOH A 25 425 495 HOH HOH . 
R 8 HOH A 26 426 502 HOH HOH . 
R 8 HOH A 27 427 508 HOH HOH . 
R 8 HOH A 28 428 513 HOH HOH . 
R 8 HOH A 29 429 516 HOH HOH . 
R 8 HOH A 30 430 522 HOH HOH . 
R 8 HOH A 31 431 523 HOH HOH . 
S 8 HOH B 1 101 406 HOH HOH . 
S 8 HOH B 2 102 421 HOH HOH . 
S 8 HOH B 3 103 422 HOH HOH . 
S 8 HOH B 4 104 432 HOH HOH . 
S 8 HOH B 5 105 434 HOH HOH . 
S 8 HOH B 6 106 445 HOH HOH . 
S 8 HOH B 7 107 448 HOH HOH . 
S 8 HOH B 8 108 478 HOH HOH . 
S 8 HOH B 9 109 484 HOH HOH . 
S 8 HOH B 10 110 491 HOH HOH . 
S 8 HOH B 11 111 504 HOH HOH . 
S 8 HOH B 12 112 515 HOH HOH . 
S 8 HOH B 13 113 519 HOH HOH . 
T 8 HOH C 1 101 447 HOH HOH . 
U 8 HOH D 1 401 401 HOH HOH . 
U 8 HOH D 2 402 402 HOH HOH . 
U 8 HOH D 3 403 403 HOH HOH . 
U 8 HOH D 4 404 407 HOH HOH . 
U 8 HOH D 5 405 415 HOH HOH . 
U 8 HOH D 6 406 419 HOH HOH . 
U 8 HOH D 7 407 425 HOH HOH . 
U 8 HOH D 8 408 426 HOH HOH . 
U 8 HOH D 9 409 428 HOH HOH . 
U 8 HOH D 10 410 433 HOH HOH . 
U 8 HOH D 11 411 438 HOH HOH . 
U 8 HOH D 12 412 442 HOH HOH . 
U 8 HOH D 13 413 449 HOH HOH . 
U 8 HOH D 14 414 454 HOH HOH . 
U 8 HOH D 15 415 459 HOH HOH . 
U 8 HOH D 16 416 460 HOH HOH . 
U 8 HOH D 17 417 462 HOH HOH . 
U 8 HOH D 18 418 463 HOH HOH . 
U 8 HOH D 19 419 467 HOH HOH . 
U 8 HOH D 20 420 469 HOH HOH . 
U 8 HOH D 21 421 489 HOH HOH . 
U 8 HOH D 22 422 494 HOH HOH . 
U 8 HOH D 23 423 496 HOH HOH . 
U 8 HOH D 24 424 499 HOH HOH . 
U 8 HOH D 25 425 505 HOH HOH . 
U 8 HOH D 26 426 506 HOH HOH . 
U 8 HOH D 27 427 507 HOH HOH . 
U 8 HOH D 28 428 509 HOH HOH . 
U 8 HOH D 29 429 511 HOH HOH . 
U 8 HOH D 30 430 512 HOH HOH . 
U 8 HOH D 31 431 517 HOH HOH . 
U 8 HOH D 32 432 521 HOH HOH . 
V 8 HOH E 1 401 408 HOH HOH . 
V 8 HOH E 2 402 409 HOH HOH . 
V 8 HOH E 3 403 413 HOH HOH . 
V 8 HOH E 4 404 414 HOH HOH . 
V 8 HOH E 5 405 416 HOH HOH . 
V 8 HOH E 6 406 418 HOH HOH . 
V 8 HOH E 7 407 420 HOH HOH . 
V 8 HOH E 8 408 423 HOH HOH . 
V 8 HOH E 9 409 427 HOH HOH . 
V 8 HOH E 10 410 429 HOH HOH . 
V 8 HOH E 11 411 431 HOH HOH . 
V 8 HOH E 12 412 436 HOH HOH . 
V 8 HOH E 13 413 440 HOH HOH . 
V 8 HOH E 14 414 441 HOH HOH . 
V 8 HOH E 15 415 443 HOH HOH . 
V 8 HOH E 16 416 444 HOH HOH . 
V 8 HOH E 17 417 446 HOH HOH . 
V 8 HOH E 18 418 451 HOH HOH . 
V 8 HOH E 19 419 453 HOH HOH . 
V 8 HOH E 20 420 455 HOH HOH . 
V 8 HOH E 21 421 457 HOH HOH . 
V 8 HOH E 22 422 465 HOH HOH . 
V 8 HOH E 23 423 468 HOH HOH . 
V 8 HOH E 24 424 470 HOH HOH . 
V 8 HOH E 25 425 472 HOH HOH . 
V 8 HOH E 26 426 473 HOH HOH . 
V 8 HOH E 27 427 474 HOH HOH . 
V 8 HOH E 28 428 477 HOH HOH . 
V 8 HOH E 29 429 479 HOH HOH . 
V 8 HOH E 30 430 480 HOH HOH . 
V 8 HOH E 31 431 481 HOH HOH . 
V 8 HOH E 32 432 482 HOH HOH . 
V 8 HOH E 33 433 485 HOH HOH . 
V 8 HOH E 34 434 487 HOH HOH . 
V 8 HOH E 35 435 488 HOH HOH . 
V 8 HOH E 36 436 492 HOH HOH . 
V 8 HOH E 37 437 493 HOH HOH . 
V 8 HOH E 38 438 497 HOH HOH . 
V 8 HOH E 39 439 498 HOH HOH . 
V 8 HOH E 40 440 500 HOH HOH . 
V 8 HOH E 41 441 501 HOH HOH . 
V 8 HOH E 42 442 503 HOH HOH . 
V 8 HOH E 43 443 510 HOH HOH . 
V 8 HOH E 44 444 514 HOH HOH . 
V 8 HOH E 45 445 518 HOH HOH . 
V 8 HOH E 46 446 520 HOH HOH . 
V 8 HOH E 47 447 524 HOH HOH . 
V 8 HOH E 48 448 525 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TAM . . . F 6 57.433 -26.099 45.08 1 80 ? C TAM 301 A 1 
HETATM 2 C C1 TAM . . . F 6 58.371 -24.997 44.732 1 80 ? C1 TAM 301 A 1 
HETATM 3 C C2 TAM . . . F 6 56.945 -26.938 43.936 1 80 ? C2 TAM 301 A 1 
HETATM 4 C C3 TAM . . . F 6 56.408 -25.78 46.12 1 80 ? C3 TAM 301 A 1 
HETATM 5 C C4 TAM . . . F 6 59.807 -25.261 45.224 1 80 ? C4 TAM 301 A 1 
HETATM 6 C C5 TAM . . . F 6 58.007 -27.932 43.421 1 80 ? C5 TAM 301 A 1 
HETATM 7 C C6 TAM . . . F 6 55.097 -25.227 45.511 1 80 ? C6 TAM 301 A 1 
HETATM 8 N N TAM . . . F 6 58.307 -27.029 45.808 1 80 ? N TAM 301 A 1 
HETATM 9 O O4 TAM . . . F 6 59.83 -25.446 46.652 1 80 ? O4 TAM 301 A 1 
HETATM 10 O O5 TAM . . . F 6 59.255 -27.255 43.207 1 66.62 ? O5 TAM 301 A 1 
HETATM 11 O O6 TAM . . . F 6 54.041 -25.317 46.481 1 80 ? O6 TAM 301 A 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           175 
_model_server_stats.create_model_time_ms    113 
_model_server_stats.query_time_ms           577 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           11 
#