data_4JFD # _model_server_result.job_id rLKlAWr6uzwf58ptRyPdlw _model_server_result.datetime_utc '2024-11-04 20:51:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jfd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":306}' # _entry.id 4JFD # _exptl.entry_id 4JFD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JFD _cell.length_a 121.49 _cell.length_b 121.49 _cell.length_c 82.96 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JFD _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N ? 7 I N N ? 7 J N N ? 7 K N N ? 7 L N N ? 7 M N N ? 7 N N N ? 7 O N N ? 7 P N N ? 7 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf4 D SG CYS 23 D CYS 23 1_555 D SG CYS 89 D CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? disulf ? disulf5 D SG CYS 132 D CYS 132 1_555 D SG CYS 182 D CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf6 D SG CYS 157 D CYS 157 1_555 E SG CYS 172 E CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf7 E SG CYS 24 E CYS 23 1_555 E SG CYS 92 E CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf8 E SG CYS 146 E CYS 145 1_555 E SG CYS 211 E CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 4JFD _atom_sites.fract_transf_matrix[1][1] 0.008231 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008231 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012054 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 TAM A 1 301 301 TAM TAM . G 7 SO4 A 1 302 311 SO4 SO4 . H 7 SO4 A 1 303 312 SO4 SO4 . I 7 SO4 A 1 304 313 SO4 SO4 . J 7 SO4 A 1 305 315 SO4 SO4 . K 7 SO4 A 1 306 317 SO4 SO4 . L 7 SO4 E 1 301 314 SO4 SO4 . M 7 SO4 E 1 302 316 SO4 SO4 . N 7 SO4 E 1 303 318 SO4 SO4 . O 7 SO4 E 1 304 319 SO4 SO4 . P 7 SO4 E 1 305 320 SO4 SO4 . Q 7 SO4 E 1 306 321 SO4 SO4 . R 8 HOH A 1 401 404 HOH HOH . R 8 HOH A 2 402 405 HOH HOH . R 8 HOH A 3 403 410 HOH HOH . R 8 HOH A 4 404 411 HOH HOH . R 8 HOH A 5 405 412 HOH HOH . R 8 HOH A 6 406 417 HOH HOH . R 8 HOH A 7 407 424 HOH HOH . R 8 HOH A 8 408 430 HOH HOH . R 8 HOH A 9 409 435 HOH HOH . R 8 HOH A 10 410 437 HOH HOH . R 8 HOH A 11 411 439 HOH HOH . R 8 HOH A 12 412 450 HOH HOH . R 8 HOH A 13 413 452 HOH HOH . R 8 HOH A 14 414 456 HOH HOH . R 8 HOH A 15 415 458 HOH HOH . R 8 HOH A 16 416 461 HOH HOH . R 8 HOH A 17 417 464 HOH HOH . R 8 HOH A 18 418 466 HOH HOH . R 8 HOH A 19 419 471 HOH HOH . R 8 HOH A 20 420 475 HOH HOH . R 8 HOH A 21 421 476 HOH HOH . R 8 HOH A 22 422 483 HOH HOH . R 8 HOH A 23 423 486 HOH HOH . R 8 HOH A 24 424 490 HOH HOH . R 8 HOH A 25 425 495 HOH HOH . R 8 HOH A 26 426 502 HOH HOH . R 8 HOH A 27 427 508 HOH HOH . R 8 HOH A 28 428 513 HOH HOH . R 8 HOH A 29 429 516 HOH HOH . R 8 HOH A 30 430 522 HOH HOH . R 8 HOH A 31 431 523 HOH HOH . S 8 HOH B 1 101 406 HOH HOH . S 8 HOH B 2 102 421 HOH HOH . S 8 HOH B 3 103 422 HOH HOH . S 8 HOH B 4 104 432 HOH HOH . S 8 HOH B 5 105 434 HOH HOH . S 8 HOH B 6 106 445 HOH HOH . S 8 HOH B 7 107 448 HOH HOH . S 8 HOH B 8 108 478 HOH HOH . S 8 HOH B 9 109 484 HOH HOH . S 8 HOH B 10 110 491 HOH HOH . S 8 HOH B 11 111 504 HOH HOH . S 8 HOH B 12 112 515 HOH HOH . S 8 HOH B 13 113 519 HOH HOH . T 8 HOH C 1 101 447 HOH HOH . U 8 HOH D 1 401 401 HOH HOH . U 8 HOH D 2 402 402 HOH HOH . U 8 HOH D 3 403 403 HOH HOH . U 8 HOH D 4 404 407 HOH HOH . U 8 HOH D 5 405 415 HOH HOH . U 8 HOH D 6 406 419 HOH HOH . U 8 HOH D 7 407 425 HOH HOH . U 8 HOH D 8 408 426 HOH HOH . U 8 HOH D 9 409 428 HOH HOH . U 8 HOH D 10 410 433 HOH HOH . U 8 HOH D 11 411 438 HOH HOH . U 8 HOH D 12 412 442 HOH HOH . U 8 HOH D 13 413 449 HOH HOH . U 8 HOH D 14 414 454 HOH HOH . U 8 HOH D 15 415 459 HOH HOH . U 8 HOH D 16 416 460 HOH HOH . U 8 HOH D 17 417 462 HOH HOH . U 8 HOH D 18 418 463 HOH HOH . U 8 HOH D 19 419 467 HOH HOH . U 8 HOH D 20 420 469 HOH HOH . U 8 HOH D 21 421 489 HOH HOH . U 8 HOH D 22 422 494 HOH HOH . U 8 HOH D 23 423 496 HOH HOH . U 8 HOH D 24 424 499 HOH HOH . U 8 HOH D 25 425 505 HOH HOH . U 8 HOH D 26 426 506 HOH HOH . U 8 HOH D 27 427 507 HOH HOH . U 8 HOH D 28 428 509 HOH HOH . U 8 HOH D 29 429 511 HOH HOH . U 8 HOH D 30 430 512 HOH HOH . U 8 HOH D 31 431 517 HOH HOH . U 8 HOH D 32 432 521 HOH HOH . V 8 HOH E 1 401 408 HOH HOH . V 8 HOH E 2 402 409 HOH HOH . V 8 HOH E 3 403 413 HOH HOH . V 8 HOH E 4 404 414 HOH HOH . V 8 HOH E 5 405 416 HOH HOH . V 8 HOH E 6 406 418 HOH HOH . V 8 HOH E 7 407 420 HOH HOH . V 8 HOH E 8 408 423 HOH HOH . V 8 HOH E 9 409 427 HOH HOH . V 8 HOH E 10 410 429 HOH HOH . V 8 HOH E 11 411 431 HOH HOH . V 8 HOH E 12 412 436 HOH HOH . V 8 HOH E 13 413 440 HOH HOH . V 8 HOH E 14 414 441 HOH HOH . V 8 HOH E 15 415 443 HOH HOH . V 8 HOH E 16 416 444 HOH HOH . V 8 HOH E 17 417 446 HOH HOH . V 8 HOH E 18 418 451 HOH HOH . V 8 HOH E 19 419 453 HOH HOH . V 8 HOH E 20 420 455 HOH HOH . V 8 HOH E 21 421 457 HOH HOH . V 8 HOH E 22 422 465 HOH HOH . V 8 HOH E 23 423 468 HOH HOH . V 8 HOH E 24 424 470 HOH HOH . V 8 HOH E 25 425 472 HOH HOH . V 8 HOH E 26 426 473 HOH HOH . V 8 HOH E 27 427 474 HOH HOH . V 8 HOH E 28 428 477 HOH HOH . V 8 HOH E 29 429 479 HOH HOH . V 8 HOH E 30 430 480 HOH HOH . V 8 HOH E 31 431 481 HOH HOH . V 8 HOH E 32 432 482 HOH HOH . V 8 HOH E 33 433 485 HOH HOH . V 8 HOH E 34 434 487 HOH HOH . V 8 HOH E 35 435 488 HOH HOH . V 8 HOH E 36 436 492 HOH HOH . V 8 HOH E 37 437 493 HOH HOH . V 8 HOH E 38 438 497 HOH HOH . V 8 HOH E 39 439 498 HOH HOH . V 8 HOH E 40 440 500 HOH HOH . V 8 HOH E 41 441 501 HOH HOH . V 8 HOH E 42 442 503 HOH HOH . V 8 HOH E 43 443 510 HOH HOH . V 8 HOH E 44 444 514 HOH HOH . V 8 HOH E 45 445 518 HOH HOH . V 8 HOH E 46 446 520 HOH HOH . V 8 HOH E 47 447 524 HOH HOH . V 8 HOH E 48 448 525 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . Q 7 16.884 3.36 34.893 0.5 54.58 ? S SO4 306 E 1 HETATM 2 O O1 SO4 . . . Q 7 16.305 3.43 33.552 0.5 31.96 ? O1 SO4 306 E 1 HETATM 3 O O2 SO4 . . . Q 7 18.186 4.055 34.896 0.5 42.76 ? O2 SO4 306 E 1 HETATM 4 O O3 SO4 . . . Q 7 15.953 4.016 35.845 0.5 46.24 ? O3 SO4 306 E 1 HETATM 5 O O4 SO4 . . . Q 7 17.091 1.959 35.288 0.5 34.4 ? O4 SO4 306 E 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #