data_4JG7 # _model_server_result.job_id 8os3eyU1lEPssFGrrEUF7Q _model_server_result.datetime_utc '2025-02-05 17:50:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jg7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 4JG7 # _exptl.entry_id 4JG7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 318.329 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2-cyano-3-[3-(1H-pyrrolo[2,3-b]pyridin-3-ylcarbonyl)phenyl]propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JG7 _cell.length_a 47.66 _cell.length_b 47.66 _cell.length_c 292.12 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JG7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 51 A CYS 436 1_555 B C06 1LC . A 1LC 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.85 ? metalc ? metalc1 A O GLY 86 A GLY 471 1_555 C NA NA . A NA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc2 A O HIS 88 A HIS 473 1_555 C NA NA . A NA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc3 A O ILE 91 A ILE 476 1_555 C NA NA . A NA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc4 A OG1 THR 93 A THR 478 1_555 C NA NA . A NA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? # _chem_comp.formula 'C18 H14 N4 O2' _chem_comp.formula_weight 318.329 _chem_comp.id 1LC _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2-cyano-3-[3-(1H-pyrrolo[2,3-b]pyridin-3-ylcarbonyl)phenyl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 N20 1LC doub 1 n y C21 C22 1LC sing 2 n y N20 C19 1LC sing 3 n y C22 C23 1LC doub 4 n y C19 N18 1LC sing 5 n y C19 C24 1LC doub 6 n y C23 C24 1LC sing 7 n y N18 C17 1LC sing 8 n y C24 C16 1LC sing 9 n y C17 C16 1LC doub 10 n y C16 C02 1LC sing 11 n n N11 C10 1LC sing 12 n n C02 O01 1LC doub 13 n n C02 C03 1LC sing 14 n n C04 C03 1LC doub 15 n y C04 C05 1LC sing 16 n y C03 C15 1LC sing 17 n y C10 O12 1LC doub 18 n n C10 C07 1LC sing 19 n n C06 C05 1LC sing 20 n n C06 C07 1LC sing 21 n n C05 C13 1LC doub 22 n y C07 C08 1LC sing 23 n n C15 C14 1LC doub 24 n y C13 C14 1LC sing 25 n y C08 N09 1LC trip 26 n n C04 H041 1LC sing 27 n n C06 H062 1LC sing 28 n n C06 H061 1LC sing 29 n n C07 H071 1LC sing 30 n n N11 H112 1LC sing 31 n n N11 H111 1LC sing 32 n n C13 H131 1LC sing 33 n n C14 H141 1LC sing 34 n n C15 H151 1LC sing 35 n n C17 H171 1LC sing 36 n n N18 H181 1LC sing 37 n n C21 H211 1LC sing 38 n n C22 H1 1LC sing 39 n n C23 H231 1LC sing 40 n n # _atom_sites.entry_id 4JG7 _atom_sites.fract_transf_matrix[1][1] 0.020982 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020982 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003423 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1LC A 1 801 801 1LC 1LC . C 3 NA A 1 802 802 NA NA . D 4 HOH A 1 901 901 HOH HOH . D 4 HOH A 2 902 902 HOH HOH . D 4 HOH A 3 903 903 HOH HOH . D 4 HOH A 4 904 904 HOH HOH . D 4 HOH A 5 905 905 HOH HOH . D 4 HOH A 6 906 906 HOH HOH . D 4 HOH A 7 907 907 HOH HOH . D 4 HOH A 8 908 908 HOH HOH . D 4 HOH A 9 909 909 HOH HOH . D 4 HOH A 10 910 910 HOH HOH . D 4 HOH A 11 911 912 HOH HOH . D 4 HOH A 12 912 913 HOH HOH . D 4 HOH A 13 913 914 HOH HOH . D 4 HOH A 14 914 915 HOH HOH . D 4 HOH A 15 915 916 HOH HOH . D 4 HOH A 16 916 917 HOH HOH . D 4 HOH A 17 917 918 HOH HOH . D 4 HOH A 18 918 919 HOH HOH . D 4 HOH A 19 919 921 HOH HOH . D 4 HOH A 20 920 922 HOH HOH . D 4 HOH A 21 921 923 HOH HOH . D 4 HOH A 22 922 924 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 1LC . . . B 2 7.824 7.529 -22.853 1 32.65 ? O01 1LC 801 A 1 HETATM 2 C C02 1LC . . . B 2 6.885 8.305 -23.006 1 34.25 ? C02 1LC 801 A 1 HETATM 3 C C03 1LC . . . B 2 6.495 9.252 -21.886 1 34.12 ? C03 1LC 801 A 1 HETATM 4 C C04 1LC . . . B 2 5.474 10.176 -22.059 1 33.77 ? C04 1LC 801 A 1 HETATM 5 C C05 1LC . . . B 2 5.096 11.114 -20.946 1 32.46 ? C05 1LC 801 A 1 HETATM 6 C C06 1LC . . . B 2 3.974 12.118 -21.131 1 34.52 ? C06 1LC 801 A 1 HETATM 7 C C07 1LC . . . B 2 2.566 11.648 -20.955 1 34.41 ? C07 1LC 801 A 1 HETATM 8 C C08 1LC . . . B 2 2.361 11.256 -19.521 1 34.32 ? C08 1LC 801 A 1 HETATM 9 N N09 1LC . . . B 2 2.213 10.962 -18.426 1 33.54 ? N09 1LC 801 A 1 HETATM 10 C C10 1LC . . . B 2 2.301 10.45 -21.808 1 35.17 ? C10 1LC 801 A 1 HETATM 11 N N11 1LC . . . B 2 1.95 10.605 -23.196 1 38.14 ? N11 1LC 801 A 1 HETATM 12 O O12 1LC . . . B 2 2.388 9.335 -21.322 1 32.4 ? O12 1LC 801 A 1 HETATM 13 C C13 1LC . . . B 2 5.765 11.048 -19.753 1 32.28 ? C13 1LC 801 A 1 HETATM 14 C C14 1LC . . . B 2 6.873 10.05 -19.564 1 32.15 ? C14 1LC 801 A 1 HETATM 15 C C15 1LC . . . B 2 7.217 9.193 -20.584 1 32.25 ? C15 1LC 801 A 1 HETATM 16 C C16 1LC . . . B 2 6.123 8.288 -24.318 1 35.02 ? C16 1LC 801 A 1 HETATM 17 C C17 1LC . . . B 2 4.738 8.28 -24.499 1 34.34 ? C17 1LC 801 A 1 HETATM 18 N N18 1LC . . . B 2 4.49 8.266 -25.864 1 36.5 ? N18 1LC 801 A 1 HETATM 19 C C19 1LC . . . B 2 5.692 8.263 -26.561 1 37.4 ? C19 1LC 801 A 1 HETATM 20 N N20 1LC . . . B 2 5.95 8.25 -27.873 1 37.54 ? N20 1LC 801 A 1 HETATM 21 C C21 1LC . . . B 2 7.212 8.25 -28.32 1 37.95 ? C21 1LC 801 A 1 HETATM 22 C C22 1LC . . . B 2 8.296 8.263 -27.443 1 37.15 ? C22 1LC 801 A 1 HETATM 23 C C23 1LC . . . B 2 8.05 8.276 -26.07 1 35.97 ? C23 1LC 801 A 1 HETATM 24 C C24 1LC . . . B 2 6.733 8.276 -25.626 1 36.38 ? C24 1LC 801 A 1 HETATM 25 H H041 1LC . . . B 2 5 10.216 -22.905 1 40.53 ? H041 1LC 801 A 1 HETATM 26 H H062 1LC . . . B 2 4.061 12.535 -22 1 41.42 ? H062 1LC 801 A 1 HETATM 27 H H071 1LC . . . B 2 1.951 12.371 -21.192 1 41.29 ? H071 1LC 801 A 1 HETATM 28 H H112 1LC . . . B 2 1.79 9.867 -23.711 1 45.77 ? H112 1LC 801 A 1 HETATM 29 H H111 1LC . . . B 2 1.886 11.429 -23.556 1 45.77 ? H111 1LC 801 A 1 HETATM 30 H H131 1LC . . . B 2 5.527 11.644 -19.036 1 38.73 ? H131 1LC 801 A 1 HETATM 31 H H141 1LC . . . B 2 7.34 10.009 -18.727 1 38.59 ? H141 1LC 801 A 1 HETATM 32 H H151 1LC . . . B 2 7.933 8.553 -20.457 1 38.7 ? H151 1LC 801 A 1 HETATM 33 H H171 1LC . . . B 2 4.075 8.285 -23.803 1 41.21 ? H171 1LC 801 A 1 HETATM 34 H H181 1LC . . . B 2 3.675 8.259 -26.24 1 43.79 ? H181 1LC 801 A 1 HETATM 35 H H211 1LC . . . B 2 7.376 8.241 -29.276 1 45.54 ? H211 1LC 801 A 1 HETATM 36 H H231 1LC . . . B 2 8.78 8.286 -25.441 1 43.16 ? H231 1LC 801 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 36 #