data_4JGJ
#
_model_server_result.job_id            VrLYhK4EezymSVN6sqVVhQ 
_model_server_result.datetime_utc      '2025-03-01 04:22:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4jgj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":201}' 
#
_entry.id    4JGJ 
#
_exptl.entry_id    4JGJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4JGJ 
_cell.length_a            101.168 
_cell.length_b            101.168 
_cell.length_c            75.729 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4JGJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H 1 1 
C 2 1 
D 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 224 n n 
C1 O1 NAG sing 225 n n 
C1 O5 NAG sing 226 n n 
C1 H1 NAG sing 227 n n 
C2 C3 NAG sing 228 n n 
C2 N2 NAG sing 229 n n 
C2 H2 NAG sing 230 n n 
C3 C4 NAG sing 231 n n 
C3 O3 NAG sing 232 n n 
C3 H3 NAG sing 233 n n 
C4 C5 NAG sing 234 n n 
C4 O4 NAG sing 235 n n 
C4 H4 NAG sing 236 n n 
C5 C6 NAG sing 237 n n 
C5 O5 NAG sing 238 n n 
C5 H5 NAG sing 239 n n 
C6 O6 NAG sing 240 n n 
C6 H61 NAG sing 241 n n 
C6 H62 NAG sing 242 n n 
C7 C8 NAG sing 243 n n 
C7 N2 NAG sing 244 n n 
C7 O7 NAG doub 245 n n 
C8 H81 NAG sing 246 n n 
C8 H82 NAG sing 247 n n 
C8 H83 NAG sing 248 n n 
N2 HN2 NAG sing 249 n n 
O1 HO1 NAG sing 250 n n 
O3 HO3 NAG sing 251 n n 
O4 HO4 NAG sing 252 n n 
O6 HO6 NAG sing 253 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     4JGJ 
_atom_sites.fract_transf_matrix[1][1]    0.009885 
_atom_sites.fract_transf_matrix[1][2]    0.005707 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011414 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013205 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 NAG A 1 301 301 NAG NAG . 
F 3 NAG B 1 201 302 NAG NAG . 
G 4 HOH A 1 401 1 HOH HOH . 
G 4 HOH A 2 402 2 HOH HOH . 
G 4 HOH A 3 403 6 HOH HOH . 
G 4 HOH A 4 404 7 HOH HOH . 
G 4 HOH A 5 405 8 HOH HOH . 
G 4 HOH A 6 406 9 HOH HOH . 
G 4 HOH A 7 407 10 HOH HOH . 
G 4 HOH A 8 408 11 HOH HOH . 
H 4 HOH B 1 301 3 HOH HOH . 
H 4 HOH B 2 302 4 HOH HOH . 
H 4 HOH B 3 303 5 HOH HOH . 
H 4 HOH B 4 304 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . F 3 48.608 74.388 -2.796 1 61.6 ? C1 NAG 201 B 1 
HETATM 2 C C2 NAG . . . F 3 48.856 73.818 -4.162 1 63.4 ? C2 NAG 201 B 1 
HETATM 3 C C3 NAG . . . F 3 49.386 74.804 -5.18 1 59.77 ? C3 NAG 201 B 1 
HETATM 4 C C4 NAG . . . F 3 50.048 76.052 -4.649 1 59.65 ? C4 NAG 201 B 1 
HETATM 5 C C5 NAG . . . F 3 49.986 76.213 -3.164 1 63.23 ? C5 NAG 201 B 1 
HETATM 6 C C6 NAG . . . F 3 50.176 77.661 -2.826 1 60.64 ? C6 NAG 201 B 1 
HETATM 7 C C7 NAG . . . F 3 49.371 71.435 -3.493 1 45.43 ? C7 NAG 201 B 1 
HETATM 8 C C8 NAG . . . F 3 50.378 70.33 -3.437 1 25.04 ? C8 NAG 201 B 1 
HETATM 9 N N2 NAG . . . F 3 49.76 72.696 -4.07 1 56.27 ? N2 NAG 201 B 1 
HETATM 10 O O3 NAG . . . F 3 48.379 75.153 -6.067 1 47.27 ? O3 NAG 201 B 1 
HETATM 11 O O4 NAG . . . F 3 51.376 76.061 -5.022 1 57.41 ? O4 NAG 201 B 1 
HETATM 12 O O5 NAG . . . F 3 48.771 75.75 -2.716 1 66.93 ? O5 NAG 201 B 1 
HETATM 13 O O6 NAG . . . F 3 49.02 78.262 -2.352 1 51.08 ? O6 NAG 201 B 1 
HETATM 14 O O7 NAG . . . F 3 48.239 71.253 -3.046 1 41.55 ? O7 NAG 201 B 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           14 
#