data_4JGV
#
_model_server_result.job_id            DufcDvfJKlakObdUbQg8pw 
_model_server_result.datetime_utc      '2024-11-26 12:13:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4jgv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    4JGV 
#
_exptl.entry_id    4JGV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              266.333 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-(3,4,5-trihydroxyphenyl)nonan-1-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4JGV 
_cell.length_a            74.084 
_cell.length_b            76.9 
_cell.length_c            128.137 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4JGV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C15 H22 O4' 
_chem_comp.formula_weight    266.333 
_chem_comp.id                T94 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-(3,4,5-trihydroxyphenyl)nonan-1-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O9 C1 T94 sing 303 n n 
O19 C10 T94 doub 304 n n 
C14 C13 T94 sing 305 n n 
C14 C15 T94 sing 306 n n 
C6 C1 T94 doub 307 n y 
C6 C5 T94 sing 308 n y 
C1 C2 T94 sing 309 n y 
C12 C13 T94 sing 310 n n 
C12 C11 T94 sing 311 n n 
C10 C5 T94 sing 312 n n 
C10 C11 T94 sing 313 n n 
C5 C4 T94 doub 314 n y 
C2 O8 T94 sing 315 n n 
C2 C3 T94 doub 316 n y 
C18 C17 T94 sing 317 n n 
C15 C16 T94 sing 318 n n 
C4 C3 T94 sing 319 n y 
C3 O7 T94 sing 320 n n 
C16 C17 T94 sing 321 n n 
C4 H1 T94 sing 322 n n 
C6 H2 T94 sing 323 n n 
O7 H3 T94 sing 324 n n 
O8 H4 T94 sing 325 n n 
O9 H5 T94 sing 326 n n 
C11 H6 T94 sing 327 n n 
C11 H7 T94 sing 328 n n 
C12 H8 T94 sing 329 n n 
C12 H9 T94 sing 330 n n 
C13 H10 T94 sing 331 n n 
C13 H11 T94 sing 332 n n 
C14 H12 T94 sing 333 n n 
C14 H13 T94 sing 334 n n 
C15 H14 T94 sing 335 n n 
C15 H15 T94 sing 336 n n 
C16 H16 T94 sing 337 n n 
C16 H17 T94 sing 338 n n 
C17 H18 T94 sing 339 n n 
C17 H19 T94 sing 340 n n 
C18 H20 T94 sing 341 n n 
C18 H21 T94 sing 342 n n 
C18 H22 T94 sing 343 n n 
#
_atom_sites.entry_id                     4JGV 
_atom_sites.fract_transf_matrix[1][1]    0.013498 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013004 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007804 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 T94 A 1 601 1 T94 T94 . 
D 3 GOL A 1 602 1 GOL GOL . 
E 3 GOL A 1 603 2 GOL GOL . 
F 3 GOL A 1 604 3 GOL GOL . 
G 3 GOL A 1 605 4 GOL GOL . 
H 3 GOL A 1 606 5 GOL GOL . 
I 3 GOL A 1 607 6 GOL GOL . 
J 3 GOL B 1 601 7 GOL GOL . 
K 4 HOH A 1 701 1 HOH HOH . 
K 4 HOH A 2 702 2 HOH HOH . 
K 4 HOH A 3 703 3 HOH HOH . 
K 4 HOH A 4 704 4 HOH HOH . 
K 4 HOH A 5 705 5 HOH HOH . 
K 4 HOH A 6 706 6 HOH HOH . 
K 4 HOH A 7 707 7 HOH HOH . 
K 4 HOH A 8 708 10 HOH HOH . 
K 4 HOH A 9 709 11 HOH HOH . 
K 4 HOH A 10 710 12 HOH HOH . 
K 4 HOH A 11 711 13 HOH HOH . 
K 4 HOH A 12 712 16 HOH HOH . 
K 4 HOH A 13 713 17 HOH HOH . 
K 4 HOH A 14 714 19 HOH HOH . 
K 4 HOH A 15 715 21 HOH HOH . 
K 4 HOH A 16 716 24 HOH HOH . 
K 4 HOH A 17 717 25 HOH HOH . 
K 4 HOH A 18 718 26 HOH HOH . 
K 4 HOH A 19 719 27 HOH HOH . 
K 4 HOH A 20 720 28 HOH HOH . 
K 4 HOH A 21 721 29 HOH HOH . 
K 4 HOH A 22 722 31 HOH HOH . 
K 4 HOH A 23 723 37 HOH HOH . 
K 4 HOH A 24 724 38 HOH HOH . 
K 4 HOH A 25 725 39 HOH HOH . 
K 4 HOH A 26 726 41 HOH HOH . 
K 4 HOH A 27 727 42 HOH HOH . 
K 4 HOH A 28 728 46 HOH HOH . 
K 4 HOH A 29 729 47 HOH HOH . 
K 4 HOH A 30 730 48 HOH HOH . 
K 4 HOH A 31 731 51 HOH HOH . 
K 4 HOH A 32 732 54 HOH HOH . 
K 4 HOH A 33 733 58 HOH HOH . 
K 4 HOH A 34 734 59 HOH HOH . 
K 4 HOH A 35 735 63 HOH HOH . 
K 4 HOH A 36 736 67 HOH HOH . 
K 4 HOH A 37 737 68 HOH HOH . 
K 4 HOH A 38 738 69 HOH HOH . 
K 4 HOH A 39 739 70 HOH HOH . 
K 4 HOH A 40 740 72 HOH HOH . 
K 4 HOH A 41 741 73 HOH HOH . 
K 4 HOH A 42 742 75 HOH HOH . 
K 4 HOH A 43 743 76 HOH HOH . 
K 4 HOH A 44 744 78 HOH HOH . 
K 4 HOH A 45 745 79 HOH HOH . 
K 4 HOH A 46 746 80 HOH HOH . 
K 4 HOH A 47 747 81 HOH HOH . 
K 4 HOH A 48 748 85 HOH HOH . 
K 4 HOH A 49 749 88 HOH HOH . 
K 4 HOH A 50 750 89 HOH HOH . 
K 4 HOH A 51 751 95 HOH HOH . 
K 4 HOH A 52 752 96 HOH HOH . 
K 4 HOH A 53 753 97 HOH HOH . 
K 4 HOH A 54 754 98 HOH HOH . 
K 4 HOH A 55 755 99 HOH HOH . 
K 4 HOH A 56 756 100 HOH HOH . 
K 4 HOH A 57 757 101 HOH HOH . 
K 4 HOH A 58 758 102 HOH HOH . 
K 4 HOH A 59 759 103 HOH HOH . 
K 4 HOH A 60 760 106 HOH HOH . 
K 4 HOH A 61 761 107 HOH HOH . 
K 4 HOH A 62 762 109 HOH HOH . 
K 4 HOH A 63 763 110 HOH HOH . 
K 4 HOH A 64 764 112 HOH HOH . 
K 4 HOH A 65 765 114 HOH HOH . 
K 4 HOH A 66 766 115 HOH HOH . 
K 4 HOH A 67 767 117 HOH HOH . 
K 4 HOH A 68 768 119 HOH HOH . 
K 4 HOH A 69 769 122 HOH HOH . 
K 4 HOH A 70 770 124 HOH HOH . 
K 4 HOH A 71 771 126 HOH HOH . 
K 4 HOH A 72 772 127 HOH HOH . 
K 4 HOH A 73 773 128 HOH HOH . 
K 4 HOH A 74 774 129 HOH HOH . 
K 4 HOH A 75 775 130 HOH HOH . 
K 4 HOH A 76 776 131 HOH HOH . 
K 4 HOH A 77 777 132 HOH HOH . 
K 4 HOH A 78 778 133 HOH HOH . 
K 4 HOH A 79 779 135 HOH HOH . 
K 4 HOH A 80 780 136 HOH HOH . 
K 4 HOH A 81 781 140 HOH HOH . 
K 4 HOH A 82 782 142 HOH HOH . 
K 4 HOH A 83 783 143 HOH HOH . 
K 4 HOH A 84 784 144 HOH HOH . 
K 4 HOH A 85 785 151 HOH HOH . 
K 4 HOH A 86 786 154 HOH HOH . 
K 4 HOH A 87 787 155 HOH HOH . 
K 4 HOH A 88 788 157 HOH HOH . 
K 4 HOH A 89 789 162 HOH HOH . 
K 4 HOH A 90 790 166 HOH HOH . 
K 4 HOH A 91 791 168 HOH HOH . 
K 4 HOH A 92 792 169 HOH HOH . 
K 4 HOH A 93 793 171 HOH HOH . 
K 4 HOH A 94 794 172 HOH HOH . 
K 4 HOH A 95 795 175 HOH HOH . 
K 4 HOH A 96 796 176 HOH HOH . 
K 4 HOH A 97 797 178 HOH HOH . 
K 4 HOH A 98 798 179 HOH HOH . 
K 4 HOH A 99 799 180 HOH HOH . 
K 4 HOH A 100 800 182 HOH HOH . 
K 4 HOH A 101 801 183 HOH HOH . 
K 4 HOH A 102 802 186 HOH HOH . 
K 4 HOH A 103 803 187 HOH HOH . 
K 4 HOH A 104 804 189 HOH HOH . 
K 4 HOH A 105 805 190 HOH HOH . 
K 4 HOH A 106 806 193 HOH HOH . 
K 4 HOH A 107 807 195 HOH HOH . 
K 4 HOH A 108 808 197 HOH HOH . 
K 4 HOH A 109 809 198 HOH HOH . 
K 4 HOH A 110 810 199 HOH HOH . 
K 4 HOH A 111 811 200 HOH HOH . 
K 4 HOH A 112 812 201 HOH HOH . 
K 4 HOH A 113 813 204 HOH HOH . 
K 4 HOH A 114 814 205 HOH HOH . 
K 4 HOH A 115 815 206 HOH HOH . 
K 4 HOH A 116 816 207 HOH HOH . 
K 4 HOH A 117 817 208 HOH HOH . 
K 4 HOH A 118 818 210 HOH HOH . 
K 4 HOH A 119 819 211 HOH HOH . 
K 4 HOH A 120 820 212 HOH HOH . 
K 4 HOH A 121 821 213 HOH HOH . 
K 4 HOH A 122 822 214 HOH HOH . 
K 4 HOH A 123 823 215 HOH HOH . 
L 4 HOH B 1 701 8 HOH HOH . 
L 4 HOH B 2 702 9 HOH HOH . 
L 4 HOH B 3 703 14 HOH HOH . 
L 4 HOH B 4 704 15 HOH HOH . 
L 4 HOH B 5 705 18 HOH HOH . 
L 4 HOH B 6 706 20 HOH HOH . 
L 4 HOH B 7 707 22 HOH HOH . 
L 4 HOH B 8 708 23 HOH HOH . 
L 4 HOH B 9 709 30 HOH HOH . 
L 4 HOH B 10 710 32 HOH HOH . 
L 4 HOH B 11 711 33 HOH HOH . 
L 4 HOH B 12 712 34 HOH HOH . 
L 4 HOH B 13 713 35 HOH HOH . 
L 4 HOH B 14 714 36 HOH HOH . 
L 4 HOH B 15 715 40 HOH HOH . 
L 4 HOH B 16 716 43 HOH HOH . 
L 4 HOH B 17 717 44 HOH HOH . 
L 4 HOH B 18 718 45 HOH HOH . 
L 4 HOH B 19 719 49 HOH HOH . 
L 4 HOH B 20 720 50 HOH HOH . 
L 4 HOH B 21 721 52 HOH HOH . 
L 4 HOH B 22 722 55 HOH HOH . 
L 4 HOH B 23 723 56 HOH HOH . 
L 4 HOH B 24 724 57 HOH HOH . 
L 4 HOH B 25 725 60 HOH HOH . 
L 4 HOH B 26 726 61 HOH HOH . 
L 4 HOH B 27 727 62 HOH HOH . 
L 4 HOH B 28 728 64 HOH HOH . 
L 4 HOH B 29 729 65 HOH HOH . 
L 4 HOH B 30 730 66 HOH HOH . 
L 4 HOH B 31 731 71 HOH HOH . 
L 4 HOH B 32 732 74 HOH HOH . 
L 4 HOH B 33 733 77 HOH HOH . 
L 4 HOH B 34 734 82 HOH HOH . 
L 4 HOH B 35 735 83 HOH HOH . 
L 4 HOH B 36 736 84 HOH HOH . 
L 4 HOH B 37 737 86 HOH HOH . 
L 4 HOH B 38 738 87 HOH HOH . 
L 4 HOH B 39 739 90 HOH HOH . 
L 4 HOH B 40 740 91 HOH HOH . 
L 4 HOH B 41 741 92 HOH HOH . 
L 4 HOH B 42 742 93 HOH HOH . 
L 4 HOH B 43 743 94 HOH HOH . 
L 4 HOH B 44 744 104 HOH HOH . 
L 4 HOH B 45 745 105 HOH HOH . 
L 4 HOH B 46 746 108 HOH HOH . 
L 4 HOH B 47 747 111 HOH HOH . 
L 4 HOH B 48 748 113 HOH HOH . 
L 4 HOH B 49 749 116 HOH HOH . 
L 4 HOH B 50 750 118 HOH HOH . 
L 4 HOH B 51 751 120 HOH HOH . 
L 4 HOH B 52 752 121 HOH HOH . 
L 4 HOH B 53 753 123 HOH HOH . 
L 4 HOH B 54 754 125 HOH HOH . 
L 4 HOH B 55 755 134 HOH HOH . 
L 4 HOH B 56 756 137 HOH HOH . 
L 4 HOH B 57 757 138 HOH HOH . 
L 4 HOH B 58 758 139 HOH HOH . 
L 4 HOH B 59 759 141 HOH HOH . 
L 4 HOH B 60 760 145 HOH HOH . 
L 4 HOH B 61 761 146 HOH HOH . 
L 4 HOH B 62 762 147 HOH HOH . 
L 4 HOH B 63 763 148 HOH HOH . 
L 4 HOH B 64 764 149 HOH HOH . 
L 4 HOH B 65 765 150 HOH HOH . 
L 4 HOH B 66 766 152 HOH HOH . 
L 4 HOH B 67 767 153 HOH HOH . 
L 4 HOH B 68 768 156 HOH HOH . 
L 4 HOH B 69 769 158 HOH HOH . 
L 4 HOH B 70 770 159 HOH HOH . 
L 4 HOH B 71 771 160 HOH HOH . 
L 4 HOH B 72 772 161 HOH HOH . 
L 4 HOH B 73 773 163 HOH HOH . 
L 4 HOH B 74 774 164 HOH HOH . 
L 4 HOH B 75 775 165 HOH HOH . 
L 4 HOH B 76 776 167 HOH HOH . 
L 4 HOH B 77 777 170 HOH HOH . 
L 4 HOH B 78 778 173 HOH HOH . 
L 4 HOH B 79 779 174 HOH HOH . 
L 4 HOH B 80 780 177 HOH HOH . 
L 4 HOH B 81 781 181 HOH HOH . 
L 4 HOH B 82 782 184 HOH HOH . 
L 4 HOH B 83 783 185 HOH HOH . 
L 4 HOH B 84 784 188 HOH HOH . 
L 4 HOH B 85 785 191 HOH HOH . 
L 4 HOH B 86 786 192 HOH HOH . 
L 4 HOH B 87 787 196 HOH HOH . 
L 4 HOH B 88 788 202 HOH HOH . 
L 4 HOH B 89 789 203 HOH HOH . 
L 4 HOH B 90 790 209 HOH HOH . 
L 4 HOH B 91 791 216 HOH HOH . 
L 4 HOH B 92 792 217 HOH HOH . 
L 4 HOH B 93 793 218 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 T94 . . . C 2 -16.289 20.217 -4.968 0.9 60.75 ? C1 T94 601 A 1 
HETATM 2 C C2 T94 . . . C 2 -17.247 19.527 -4.228 0.7 68.9 ? C2 T94 601 A 1 
HETATM 3 C C3 T94 . . . C 2 -16.925 18.343 -3.593 0.7 69.99 ? C3 T94 601 A 1 
HETATM 4 C C4 T94 . . . C 2 -15.619 17.857 -3.724 0.7 67.5 ? C4 T94 601 A 1 
HETATM 5 C C5 T94 . . . C 2 -14.696 18.572 -4.453 0.7 57.66 ? C5 T94 601 A 1 
HETATM 6 C C6 T94 . . . C 2 -15.025 19.729 -5.079 0.9 58.17 ? C6 T94 601 A 1 
HETATM 7 O O7 T94 . . . C 2 -17.87 17.669 -2.857 0.7 59.39 ? O7 T94 601 A 1 
HETATM 8 O O8 T94 . . . C 2 -18.517 19.993 -4.094 0.7 85.37 ? O8 T94 601 A 1 
HETATM 9 O O9 T94 . . . C 2 -16.539 21.379 -5.609 0.7 58.82 ? O9 T94 601 A 1 
HETATM 10 C C10 T94 . . . C 2 -13.336 18.094 -4.661 0.7 58.15 ? C10 T94 601 A 1 
HETATM 11 C C11 T94 . . . C 2 -12.162 18.789 -4.049 0.7 62.16 ? C11 T94 601 A 1 
HETATM 12 C C12 T94 . . . C 2 -10.959 18.615 -4.976 0.7 62.99 ? C12 T94 601 A 1 
HETATM 13 C C13 T94 . . . C 2 -10.269 17.261 -4.816 0.7 61.48 ? C13 T94 601 A 1 
HETATM 14 C C14 T94 . . . C 2 -8.789 17.384 -5.182 0.7 60.93 ? C14 T94 601 A 1 
HETATM 15 C C15 T94 . . . C 2 -7.892 17.17 -3.972 0.7 59.92 ? C15 T94 601 A 1 
HETATM 16 C C16 T94 . . . C 2 -7.97 15.722 -3.485 0.7 58.82 ? C16 T94 601 A 1 
HETATM 17 C C17 T94 . . . C 2 -6.611 15.2 -3.054 0.7 57.54 ? C17 T94 601 A 1 
HETATM 18 C C18 T94 . . . C 2 -5.643 15.204 -4.216 0.7 56.3 ? C18 T94 601 A 1 
HETATM 19 O O19 T94 . . . C 2 -13.215 17.15 -5.404 0.7 58.96 ? O19 T94 601 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           19 
#