data_4JH9 # _model_server_result.job_id EbA1gWCP7ATCBhgwK7Bzvg _model_server_result.datetime_utc '2024-12-01 02:04:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jh9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4JH9 # _exptl.entry_id 4JH9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JH9 _cell.length_a 56.475 _cell.length_b 64.477 _cell.length_c 83.907 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JH9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 7 A HIS 7 1_555 E MN MN . B MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc2 A NE2 HIS 66 A HIS 66 1_555 C MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc3 A OE1 GLU 115 A GLU 115 1_555 C MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc4 C MN MN . A MN 201 1_555 D OAF 1KM . A 1KM 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc5 C MN MN . A MN 201 1_555 D OAE 1KM . A 1KM 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc6 C MN MN . A MN 201 1_555 B NE2 HIS 7 B HIS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc7 B NE2 HIS 66 B HIS 66 1_555 E MN MN . B MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc8 B OE1 GLU 115 B GLU 115 1_555 E MN MN . B MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? metalc ? metalc9 E MN MN . B MN 201 1_555 F OAH 1KM . B 1KM 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc10 E MN MN . B MN 201 1_555 F OAE 1KM . B 1KM 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4JH9 _atom_sites.fract_transf_matrix[1][1] 0.017707 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015509 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 201 1 MN MN . D 3 1KM A 1 202 1 1KM DRG . E 2 MN B 1 201 1 MN MN . F 3 1KM B 1 202 1 1KM DRG . G 4 HOH A 1 301 2 HOH HOH . G 4 HOH A 2 302 3 HOH HOH . G 4 HOH A 3 303 4 HOH HOH . G 4 HOH A 4 304 9 HOH HOH . G 4 HOH A 5 305 10 HOH HOH . G 4 HOH A 6 306 11 HOH HOH . G 4 HOH A 7 307 12 HOH HOH . G 4 HOH A 8 308 13 HOH HOH . G 4 HOH A 9 309 15 HOH HOH . G 4 HOH A 10 310 17 HOH HOH . G 4 HOH A 11 311 18 HOH HOH . G 4 HOH A 12 312 21 HOH HOH . G 4 HOH A 13 313 23 HOH HOH . G 4 HOH A 14 314 24 HOH HOH . G 4 HOH A 15 315 27 HOH HOH . G 4 HOH A 16 316 30 HOH HOH . G 4 HOH A 17 317 31 HOH HOH . G 4 HOH A 18 318 32 HOH HOH . G 4 HOH A 19 319 33 HOH HOH . G 4 HOH A 20 320 35 HOH HOH . G 4 HOH A 21 321 37 HOH HOH . G 4 HOH A 22 322 40 HOH HOH . G 4 HOH A 23 323 41 HOH HOH . G 4 HOH A 24 324 43 HOH HOH . G 4 HOH A 25 325 46 HOH HOH . G 4 HOH A 26 326 47 HOH HOH . G 4 HOH A 27 327 52 HOH HOH . G 4 HOH A 28 328 53 HOH HOH . G 4 HOH A 29 329 55 HOH HOH . G 4 HOH A 30 330 62 HOH HOH . G 4 HOH A 31 331 63 HOH HOH . G 4 HOH A 32 332 65 HOH HOH . G 4 HOH A 33 333 67 HOH HOH . G 4 HOH A 34 334 68 HOH HOH . G 4 HOH A 35 335 69 HOH HOH . G 4 HOH A 36 336 70 HOH HOH . G 4 HOH A 37 337 72 HOH HOH . G 4 HOH A 38 338 74 HOH HOH . G 4 HOH A 39 339 76 HOH HOH . G 4 HOH A 40 340 82 HOH HOH . G 4 HOH A 41 341 86 HOH HOH . G 4 HOH A 42 342 87 HOH HOH . G 4 HOH A 43 343 88 HOH HOH . G 4 HOH A 44 344 90 HOH HOH . G 4 HOH A 45 345 94 HOH HOH . G 4 HOH A 46 346 95 HOH HOH . G 4 HOH A 47 347 97 HOH HOH . G 4 HOH A 48 348 99 HOH HOH . G 4 HOH A 49 349 102 HOH HOH . G 4 HOH A 50 350 103 HOH HOH . G 4 HOH A 51 351 104 HOH HOH . G 4 HOH A 52 352 106 HOH HOH . G 4 HOH A 53 353 113 HOH HOH . G 4 HOH A 54 354 114 HOH HOH . G 4 HOH A 55 355 116 HOH HOH . G 4 HOH A 56 356 121 HOH HOH . G 4 HOH A 57 357 123 HOH HOH . G 4 HOH A 58 358 124 HOH HOH . G 4 HOH A 59 359 125 HOH HOH . G 4 HOH A 60 360 126 HOH HOH . G 4 HOH A 61 361 127 HOH HOH . G 4 HOH A 62 362 129 HOH HOH . G 4 HOH A 63 363 130 HOH HOH . G 4 HOH A 64 364 132 HOH HOH . G 4 HOH A 65 365 136 HOH HOH . G 4 HOH A 66 366 137 HOH HOH . G 4 HOH A 67 367 138 HOH HOH . G 4 HOH A 68 368 139 HOH HOH . G 4 HOH A 69 369 141 HOH HOH . G 4 HOH A 70 370 109 HOH HOH . H 4 HOH B 1 301 1 HOH HOH . H 4 HOH B 2 302 5 HOH HOH . H 4 HOH B 3 303 6 HOH HOH . H 4 HOH B 4 304 7 HOH HOH . H 4 HOH B 5 305 8 HOH HOH . H 4 HOH B 6 306 14 HOH HOH . H 4 HOH B 7 307 16 HOH HOH . H 4 HOH B 8 308 19 HOH HOH . H 4 HOH B 9 309 20 HOH HOH . H 4 HOH B 10 310 22 HOH HOH . H 4 HOH B 11 311 25 HOH HOH . H 4 HOH B 12 312 28 HOH HOH . H 4 HOH B 13 313 29 HOH HOH . H 4 HOH B 14 314 34 HOH HOH . H 4 HOH B 15 315 38 HOH HOH . H 4 HOH B 16 316 39 HOH HOH . H 4 HOH B 17 317 42 HOH HOH . H 4 HOH B 18 318 44 HOH HOH . H 4 HOH B 19 319 45 HOH HOH . H 4 HOH B 20 320 48 HOH HOH . H 4 HOH B 21 321 49 HOH HOH . H 4 HOH B 22 322 50 HOH HOH . H 4 HOH B 23 323 54 HOH HOH . H 4 HOH B 24 324 56 HOH HOH . H 4 HOH B 25 325 57 HOH HOH . H 4 HOH B 26 326 58 HOH HOH . H 4 HOH B 27 327 59 HOH HOH . H 4 HOH B 28 328 60 HOH HOH . H 4 HOH B 29 329 61 HOH HOH . H 4 HOH B 30 330 64 HOH HOH . H 4 HOH B 31 331 66 HOH HOH . H 4 HOH B 32 332 71 HOH HOH . H 4 HOH B 33 333 73 HOH HOH . H 4 HOH B 34 334 75 HOH HOH . H 4 HOH B 35 335 78 HOH HOH . H 4 HOH B 36 336 79 HOH HOH . H 4 HOH B 37 337 81 HOH HOH . H 4 HOH B 38 338 83 HOH HOH . H 4 HOH B 39 339 84 HOH HOH . H 4 HOH B 40 340 85 HOH HOH . H 4 HOH B 41 341 89 HOH HOH . H 4 HOH B 42 342 91 HOH HOH . H 4 HOH B 43 343 92 HOH HOH . H 4 HOH B 44 344 93 HOH HOH . H 4 HOH B 45 345 96 HOH HOH . H 4 HOH B 46 346 98 HOH HOH . H 4 HOH B 47 347 100 HOH HOH . H 4 HOH B 48 348 101 HOH HOH . H 4 HOH B 49 349 105 HOH HOH . H 4 HOH B 50 350 107 HOH HOH . H 4 HOH B 51 351 108 HOH HOH . H 4 HOH B 52 352 110 HOH HOH . H 4 HOH B 53 353 111 HOH HOH . H 4 HOH B 54 354 115 HOH HOH . H 4 HOH B 55 355 117 HOH HOH . H 4 HOH B 56 356 118 HOH HOH . H 4 HOH B 57 357 119 HOH HOH . H 4 HOH B 58 358 120 HOH HOH . H 4 HOH B 59 359 122 HOH HOH . H 4 HOH B 60 360 128 HOH HOH . H 4 HOH B 61 361 131 HOH HOH . H 4 HOH B 62 362 133 HOH HOH . H 4 HOH B 63 363 134 HOH HOH . H 4 HOH B 64 364 135 HOH HOH . H 4 HOH B 65 365 140 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 0.434 _atom_site.Cartn_y 4.072 _atom_site.Cartn_z 9.406 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 1052 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #