data_4JI9 # _model_server_result.job_id VjuJkg-sepBTV_uAwdCMyQ _model_server_result.datetime_utc '2024-10-11 00:29:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ji9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1201}' # _entry.id 4JI9 # _exptl.entry_id 4JI9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 509.667 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-tert-butyl-3-[(5-methyl-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)amino]benzenesulfonamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JI9 _cell.length_a 111.992 _cell.length_b 111.992 _cell.length_c 70.467 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JI9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 174 A GLU 1006 1_555 A N PTR 175 A PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C PTR 175 A PTR 1007 1_555 A N PTR 176 A PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C PTR 176 A PTR 1008 1_555 A N LYS 177 A LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 B C GLU 174 B GLU 1006 1_555 B N PTR 175 B PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 B C PTR 175 B PTR 1007 1_555 B N PTR 176 B PTR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 B C PTR 176 B PTR 1008 1_555 B N LYS 177 B LYS 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C26 H35 N7 O2 S' _chem_comp.formula_weight 509.667 _chem_comp.id 1M3 _chem_comp.mon_nstd_flag . _chem_comp.name N-tert-butyl-3-[(5-methyl-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)amino]benzenesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4JI9 _atom_sites.fract_transf_matrix[1][1] 0.008929 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008929 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014191 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1M3 A 1 1201 1 1M3 XXX . D 2 1M3 B 1 1201 1 1M3 XXX . E 3 HOH A 1 1301 3 HOH HOH . E 3 HOH A 2 1302 5 HOH HOH . E 3 HOH A 3 1303 6 HOH HOH . E 3 HOH A 4 1304 8 HOH HOH . E 3 HOH A 5 1305 9 HOH HOH . E 3 HOH A 6 1306 11 HOH HOH . E 3 HOH A 7 1307 12 HOH HOH . E 3 HOH A 8 1308 13 HOH HOH . E 3 HOH A 9 1309 14 HOH HOH . E 3 HOH A 10 1310 15 HOH HOH . E 3 HOH A 11 1311 17 HOH HOH . E 3 HOH A 12 1312 18 HOH HOH . E 3 HOH A 13 1313 20 HOH HOH . E 3 HOH A 14 1314 21 HOH HOH . E 3 HOH A 15 1315 23 HOH HOH . E 3 HOH A 16 1316 26 HOH HOH . E 3 HOH A 17 1317 27 HOH HOH . E 3 HOH A 18 1318 30 HOH HOH . E 3 HOH A 19 1319 31 HOH HOH . E 3 HOH A 20 1320 32 HOH HOH . E 3 HOH A 21 1321 35 HOH HOH . E 3 HOH A 22 1322 38 HOH HOH . E 3 HOH A 23 1323 39 HOH HOH . E 3 HOH A 24 1324 43 HOH HOH . E 3 HOH A 25 1325 44 HOH HOH . E 3 HOH A 26 1326 45 HOH HOH . E 3 HOH A 27 1327 48 HOH HOH . E 3 HOH A 28 1328 49 HOH HOH . E 3 HOH A 29 1329 51 HOH HOH . E 3 HOH A 30 1330 56 HOH HOH . E 3 HOH A 31 1331 57 HOH HOH . E 3 HOH A 32 1332 59 HOH HOH . E 3 HOH A 33 1333 63 HOH HOH . E 3 HOH A 34 1334 64 HOH HOH . E 3 HOH A 35 1335 68 HOH HOH . E 3 HOH A 36 1336 69 HOH HOH . E 3 HOH A 37 1337 71 HOH HOH . E 3 HOH A 38 1338 72 HOH HOH . E 3 HOH A 39 1339 73 HOH HOH . E 3 HOH A 40 1340 74 HOH HOH . E 3 HOH A 41 1341 79 HOH HOH . E 3 HOH A 42 1342 82 HOH HOH . E 3 HOH A 43 1343 83 HOH HOH . E 3 HOH A 44 1344 89 HOH HOH . E 3 HOH A 45 1345 90 HOH HOH . E 3 HOH A 46 1346 91 HOH HOH . E 3 HOH A 47 1347 93 HOH HOH . E 3 HOH A 48 1348 94 HOH HOH . E 3 HOH A 49 1349 98 HOH HOH . E 3 HOH A 50 1350 100 HOH HOH . E 3 HOH A 51 1351 107 HOH HOH . E 3 HOH A 52 1352 108 HOH HOH . E 3 HOH A 53 1353 118 HOH HOH . F 3 HOH B 1 1301 2 HOH HOH . F 3 HOH B 2 1302 4 HOH HOH . F 3 HOH B 3 1303 7 HOH HOH . F 3 HOH B 4 1304 10 HOH HOH . F 3 HOH B 5 1305 16 HOH HOH . F 3 HOH B 6 1306 19 HOH HOH . F 3 HOH B 7 1307 22 HOH HOH . F 3 HOH B 8 1308 24 HOH HOH . F 3 HOH B 9 1309 25 HOH HOH . F 3 HOH B 10 1310 28 HOH HOH . F 3 HOH B 11 1311 29 HOH HOH . F 3 HOH B 12 1312 33 HOH HOH . F 3 HOH B 13 1313 36 HOH HOH . F 3 HOH B 14 1314 37 HOH HOH . F 3 HOH B 15 1315 40 HOH HOH . F 3 HOH B 16 1316 41 HOH HOH . F 3 HOH B 17 1317 42 HOH HOH . F 3 HOH B 18 1318 46 HOH HOH . F 3 HOH B 19 1319 47 HOH HOH . F 3 HOH B 20 1320 50 HOH HOH . F 3 HOH B 21 1321 52 HOH HOH . F 3 HOH B 22 1322 53 HOH HOH . F 3 HOH B 23 1323 54 HOH HOH . F 3 HOH B 24 1324 55 HOH HOH . F 3 HOH B 25 1325 58 HOH HOH . F 3 HOH B 26 1326 60 HOH HOH . F 3 HOH B 27 1327 61 HOH HOH . F 3 HOH B 28 1328 65 HOH HOH . F 3 HOH B 29 1329 66 HOH HOH . F 3 HOH B 30 1330 67 HOH HOH . F 3 HOH B 31 1331 70 HOH HOH . F 3 HOH B 32 1332 75 HOH HOH . F 3 HOH B 33 1333 78 HOH HOH . F 3 HOH B 34 1334 80 HOH HOH . F 3 HOH B 35 1335 81 HOH HOH . F 3 HOH B 36 1336 84 HOH HOH . F 3 HOH B 37 1337 85 HOH HOH . F 3 HOH B 38 1338 86 HOH HOH . F 3 HOH B 39 1339 87 HOH HOH . F 3 HOH B 40 1340 88 HOH HOH . F 3 HOH B 41 1341 92 HOH HOH . F 3 HOH B 42 1342 95 HOH HOH . F 3 HOH B 43 1343 96 HOH HOH . F 3 HOH B 44 1344 97 HOH HOH . F 3 HOH B 45 1345 101 HOH HOH . F 3 HOH B 46 1346 102 HOH HOH . F 3 HOH B 47 1347 104 HOH HOH . F 3 HOH B 48 1348 105 HOH HOH . F 3 HOH B 49 1349 106 HOH HOH . F 3 HOH B 50 1350 109 HOH HOH . F 3 HOH B 51 1351 110 HOH HOH . F 3 HOH B 52 1352 111 HOH HOH . F 3 HOH B 53 1353 113 HOH HOH . F 3 HOH B 54 1354 115 HOH HOH . F 3 HOH B 55 1355 117 HOH HOH . F 3 HOH B 56 1356 119 HOH HOH . F 3 HOH B 57 1357 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 1M3 . . . D 2 61.287 24.984 -35.485 1 31.66 ? O2 1M3 1201 B 1 HETATM 2 S S1 1M3 . . . D 2 60.747 24.257 -34.377 1 36.64 ? S1 1M3 1201 B 1 HETATM 3 O O1 1M3 . . . D 2 61.623 23.365 -33.667 1 33.55 ? O1 1M3 1201 B 1 HETATM 4 N N7 1M3 . . . D 2 59.998 25.443 -33.315 1 32.54 ? N7 1M3 1201 B 1 HETATM 5 C C23 1M3 . . . D 2 59.84 25.284 -31.88 1 37.06 ? C23 1M3 1201 B 1 HETATM 6 C C26 1M3 . . . D 2 61.213 25.366 -31.222 1 28.34 ? C26 1M3 1201 B 1 HETATM 7 C C25 1M3 . . . D 2 59.163 23.957 -31.553 1 36.78 ? C25 1M3 1201 B 1 HETATM 8 C C24 1M3 . . . D 2 58.974 26.413 -31.345 1 32.67 ? C24 1M3 1201 B 1 HETATM 9 C C21 1M3 . . . D 2 59.374 23.332 -35.053 1 33.15 ? C21 1M3 1201 B 1 HETATM 10 C C20 1M3 . . . D 2 58.999 22.094 -34.523 1 30.55 ? C20 1M3 1201 B 1 HETATM 11 C C19 1M3 . . . D 2 57.848 21.458 -34.985 1 28.75 ? C19 1M3 1201 B 1 HETATM 12 C C18 1M3 . . . D 2 57.091 22.068 -35.989 1 30.11 ? C18 1M3 1201 B 1 HETATM 13 C C22 1M3 . . . D 2 58.62 23.927 -36.062 1 28.69 ? C22 1M3 1201 B 1 HETATM 14 C C17 1M3 . . . D 2 57.468 23.304 -36.53 1 30.4 ? C17 1M3 1201 B 1 HETATM 15 N N1 1M3 . . . D 2 56.755 23.877 -37.54 1 37.06 ? N1 1M3 1201 B 1 HETATM 16 C C1 1M3 . . . D 2 55.824 23.337 -38.374 1 30.18 ? C1 1M3 1201 B 1 HETATM 17 N N3 1M3 . . . D 2 55.808 21.999 -38.524 1 26.07 ? N3 1M3 1201 B 1 HETATM 18 C C4 1M3 . . . D 2 54.896 21.43 -39.327 1 28.49 ? C4 1M3 1201 B 1 HETATM 19 N N2 1M3 . . . D 2 53.977 22.138 -40.004 1 26.72 ? N2 1M3 1201 B 1 HETATM 20 C C3 1M3 . . . D 2 53.978 23.469 -39.871 1 26.41 ? C3 1M3 1201 B 1 HETATM 21 C C2 1M3 . . . D 2 54.899 24.121 -39.056 1 26.26 ? C2 1M3 1201 B 1 HETATM 22 C C5 1M3 . . . D 2 54.88 25.627 -38.925 1 25.91 ? C5 1M3 1201 B 1 HETATM 23 N N4 1M3 . . . D 2 54.879 20.084 -39.48 1 28.89 ? N4 1M3 1201 B 1 HETATM 24 C C6 1M3 . . . D 2 55.611 19.06 -38.972 1 31.42 ? C6 1M3 1201 B 1 HETATM 25 C C11 1M3 . . . D 2 56.665 19.309 -38.093 1 33.71 ? C11 1M3 1201 B 1 HETATM 26 C C10 1M3 . . . D 2 57.419 18.262 -37.581 1 28.17 ? C10 1M3 1201 B 1 HETATM 27 C C9 1M3 . . . D 2 57.109 16.946 -37.939 1 33.86 ? C9 1M3 1201 B 1 HETATM 28 C C8 1M3 . . . D 2 56.046 16.689 -38.812 1 27.72 ? C8 1M3 1201 B 1 HETATM 29 C C7 1M3 . . . D 2 55.299 17.747 -39.329 1 31.98 ? C7 1M3 1201 B 1 HETATM 30 N N5 1M3 . . . D 2 57.875 15.898 -37.394 1 39.54 ? N5 1M3 1201 B 1 HETATM 31 C C15 1M3 . . . D 2 58.615 16.05 -36.123 1 46.06 ? C15 1M3 1201 B 1 HETATM 32 C C14 1M3 . . . D 2 58.127 15.086 -35.053 1 48.88 ? C14 1M3 1201 B 1 HETATM 33 N N6 1M3 . . . D 2 58.382 13.736 -35.573 1 61.71 ? N6 1M3 1201 B 1 HETATM 34 C C16 1M3 . . . D 2 58.158 12.74 -34.512 1 57.25 ? C16 1M3 1201 B 1 HETATM 35 C C13 1M3 . . . D 2 57.489 13.516 -36.729 1 61.36 ? C13 1M3 1201 B 1 HETATM 36 C C12 1M3 . . . D 2 57.862 14.487 -37.858 1 55.4 ? C12 1M3 1201 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 36 #