data_4JIQ # _model_server_result.job_id scdFy3Rw226CLcWafu8wKQ _model_server_result.datetime_utc '2025-07-14 01:09:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jiq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4JIQ # _exptl.entry_id 4JIQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JIQ _cell.length_a 60.15 _cell.length_b 69.98 _cell.length_c 91.99 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JIQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 100 n n N1 C10 FMN doub 101 n n C2 O2 FMN doub 102 n n C2 N3 FMN sing 103 n n N3 C4 FMN sing 104 n n N3 HN3 FMN sing 105 n n C4 O4 FMN doub 106 n n C4 C4A FMN sing 107 n n C4A N5 FMN doub 108 n n C4A C10 FMN sing 109 n n N5 C5A FMN sing 110 n n C5A C6 FMN doub 111 n y C5A C9A FMN sing 112 n y C6 C7 FMN sing 113 n y C6 H6 FMN sing 114 n n C7 C7M FMN sing 115 n n C7 C8 FMN doub 116 n y C7M HM71 FMN sing 117 n n C7M HM72 FMN sing 118 n n C7M HM73 FMN sing 119 n n C8 C8M FMN sing 120 n n C8 C9 FMN sing 121 n y C8M HM81 FMN sing 122 n n C8M HM82 FMN sing 123 n n C8M HM83 FMN sing 124 n n C9 C9A FMN doub 125 n y C9 H9 FMN sing 126 n n C9A N10 FMN sing 127 n n N10 C10 FMN sing 128 n n N10 C1' FMN sing 129 n n C1' C2' FMN sing 130 n n C1' "H1'1" FMN sing 131 n n C1' "H1'2" FMN sing 132 n n C2' O2' FMN sing 133 n n C2' C3' FMN sing 134 n n C2' H2' FMN sing 135 n n O2' HO2' FMN sing 136 n n C3' O3' FMN sing 137 n n C3' C4' FMN sing 138 n n C3' H3' FMN sing 139 n n O3' HO3' FMN sing 140 n n C4' O4' FMN sing 141 n n C4' C5' FMN sing 142 n n C4' H4' FMN sing 143 n n O4' HO4' FMN sing 144 n n C5' O5' FMN sing 145 n n C5' "H5'1" FMN sing 146 n n C5' "H5'2" FMN sing 147 n n O5' P FMN sing 148 n n P O1P FMN doub 149 n n P O2P FMN sing 150 n n P O3P FMN sing 151 n n O2P HOP2 FMN sing 152 n n O3P HOP3 FMN sing 153 n n # _atom_sites.entry_id 4JIQ _atom_sites.fract_transf_matrix[1][1] 0.016625 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01429 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010871 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 401 1 FMN FMN . C 3 1L5 A 1 402 1 1L5 PNA . D 4 DMS A 1 403 1 DMS DMS . E 4 DMS A 1 404 1 DMS DMS . F 5 HOH A 1 501 1 HOH HOH . F 5 HOH A 2 502 2 HOH HOH . F 5 HOH A 3 503 3 HOH HOH . F 5 HOH A 4 504 4 HOH HOH . F 5 HOH A 5 505 5 HOH HOH . F 5 HOH A 6 506 6 HOH HOH . F 5 HOH A 7 507 7 HOH HOH . F 5 HOH A 8 508 8 HOH HOH . F 5 HOH A 9 509 9 HOH HOH . F 5 HOH A 10 510 10 HOH HOH . F 5 HOH A 11 511 11 HOH HOH . F 5 HOH A 12 512 12 HOH HOH . F 5 HOH A 13 513 13 HOH HOH . F 5 HOH A 14 514 14 HOH HOH . F 5 HOH A 15 515 15 HOH HOH . F 5 HOH A 16 516 16 HOH HOH . F 5 HOH A 17 517 17 HOH HOH . F 5 HOH A 18 518 18 HOH HOH . F 5 HOH A 19 519 19 HOH HOH . F 5 HOH A 20 520 20 HOH HOH . F 5 HOH A 21 521 21 HOH HOH . F 5 HOH A 22 522 22 HOH HOH . F 5 HOH A 23 523 23 HOH HOH . F 5 HOH A 24 524 24 HOH HOH . F 5 HOH A 25 525 25 HOH HOH . F 5 HOH A 26 526 26 HOH HOH . F 5 HOH A 27 527 27 HOH HOH . F 5 HOH A 28 528 28 HOH HOH . F 5 HOH A 29 529 29 HOH HOH . F 5 HOH A 30 530 30 HOH HOH . F 5 HOH A 31 531 31 HOH HOH . F 5 HOH A 32 532 32 HOH HOH . F 5 HOH A 33 533 33 HOH HOH . F 5 HOH A 34 534 34 HOH HOH . F 5 HOH A 35 535 35 HOH HOH . F 5 HOH A 36 536 36 HOH HOH . F 5 HOH A 37 537 37 HOH HOH . F 5 HOH A 38 538 38 HOH HOH . F 5 HOH A 39 539 39 HOH HOH . F 5 HOH A 40 540 40 HOH HOH . F 5 HOH A 41 541 41 HOH HOH . F 5 HOH A 42 542 42 HOH HOH . F 5 HOH A 43 543 43 HOH HOH . F 5 HOH A 44 544 44 HOH HOH . F 5 HOH A 45 545 45 HOH HOH . F 5 HOH A 46 546 46 HOH HOH . F 5 HOH A 47 547 47 HOH HOH . F 5 HOH A 48 548 48 HOH HOH . F 5 HOH A 49 549 49 HOH HOH . F 5 HOH A 50 550 50 HOH HOH . F 5 HOH A 51 551 51 HOH HOH . F 5 HOH A 52 552 52 HOH HOH . F 5 HOH A 53 553 53 HOH HOH . F 5 HOH A 54 554 54 HOH HOH . F 5 HOH A 55 555 55 HOH HOH . F 5 HOH A 56 556 56 HOH HOH . F 5 HOH A 57 557 57 HOH HOH . F 5 HOH A 58 558 58 HOH HOH . F 5 HOH A 59 559 59 HOH HOH . F 5 HOH A 60 560 60 HOH HOH . F 5 HOH A 61 561 61 HOH HOH . F 5 HOH A 62 562 62 HOH HOH . F 5 HOH A 63 563 63 HOH HOH . F 5 HOH A 64 564 64 HOH HOH . F 5 HOH A 65 565 65 HOH HOH . F 5 HOH A 66 566 66 HOH HOH . F 5 HOH A 67 567 67 HOH HOH . F 5 HOH A 68 568 68 HOH HOH . F 5 HOH A 69 569 69 HOH HOH . F 5 HOH A 70 570 70 HOH HOH . F 5 HOH A 71 571 71 HOH HOH . F 5 HOH A 72 572 72 HOH HOH . F 5 HOH A 73 573 73 HOH HOH . F 5 HOH A 74 574 74 HOH HOH . F 5 HOH A 75 575 75 HOH HOH . F 5 HOH A 76 576 76 HOH HOH . F 5 HOH A 77 577 77 HOH HOH . F 5 HOH A 78 578 78 HOH HOH . F 5 HOH A 79 579 79 HOH HOH . F 5 HOH A 80 580 80 HOH HOH . F 5 HOH A 81 581 83 HOH HOH . F 5 HOH A 82 582 84 HOH HOH . F 5 HOH A 83 583 85 HOH HOH . F 5 HOH A 84 584 86 HOH HOH . F 5 HOH A 85 585 87 HOH HOH . F 5 HOH A 86 586 88 HOH HOH . F 5 HOH A 87 587 89 HOH HOH . F 5 HOH A 88 588 91 HOH HOH . F 5 HOH A 89 589 92 HOH HOH . F 5 HOH A 90 590 93 HOH HOH . F 5 HOH A 91 591 94 HOH HOH . F 5 HOH A 92 592 95 HOH HOH . F 5 HOH A 93 593 96 HOH HOH . F 5 HOH A 94 594 98 HOH HOH . F 5 HOH A 95 595 99 HOH HOH . F 5 HOH A 96 596 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 2.955 0.365 5.345 1 11.16 ? N1 FMN 401 A 1 HETATM 2 C C2 FMN . . . B 2 4.034 0.891 6.032 1 16.47 ? C2 FMN 401 A 1 HETATM 3 O O2 FMN . . . B 2 4.799 1.684 5.48 1 15.8 ? O2 FMN 401 A 1 HETATM 4 N N3 FMN . . . B 2 4.26 0.531 7.344 1 19.06 ? N3 FMN 401 A 1 HETATM 5 C C4 FMN . . . B 2 3.413 -0.353 7.98 1 26.32 ? C4 FMN 401 A 1 HETATM 6 O O4 FMN . . . B 2 3.637 -0.665 9.153 1 14.18 ? O4 FMN 401 A 1 HETATM 7 C C4A FMN . . . B 2 2.313 -0.87 7.298 1 23.1 ? C4A FMN 401 A 1 HETATM 8 N N5 FMN . . . B 2 1.442 -1.753 7.899 1 20.93 ? N5 FMN 401 A 1 HETATM 9 C C5A FMN . . . B 2 0.442 -2.383 7.183 1 27.7 ? C5A FMN 401 A 1 HETATM 10 C C6 FMN . . . B 2 -0.342 -3.364 7.789 1 18.28 ? C6 FMN 401 A 1 HETATM 11 C C7 FMN . . . B 2 -1.342 -3.999 7.063 1 23.8 ? C7 FMN 401 A 1 HETATM 12 C C7M FMN . . . B 2 -2.172 -5.062 7.718 1 15.32 ? C7M FMN 401 A 1 HETATM 13 C C8 FMN . . . B 2 -1.561 -3.66 5.729 1 29.39 ? C8 FMN 401 A 1 HETATM 14 C C8M FMN . . . B 2 -2.643 -4.348 4.946 1 17.41 ? C8M FMN 401 A 1 HETATM 15 C C9 FMN . . . B 2 -0.781 -2.674 5.126 1 17.66 ? C9 FMN 401 A 1 HETATM 16 C C9A FMN . . . B 2 0.234 -2.037 5.848 1 21.6 ? C9A FMN 401 A 1 HETATM 17 N N10 FMN . . . B 2 1.05 -1.073 5.265 1 20.1 ? N10 FMN 401 A 1 HETATM 18 C C10 FMN . . . B 2 2.095 -0.514 5.976 1 20.57 ? C10 FMN 401 A 1 HETATM 19 C C1' FMN . . . B 2 1.086 -0.89 3.78 1 23.84 ? C1' FMN 401 A 1 HETATM 20 C C2' FMN . . . B 2 1.812 -2.035 3.088 1 26.03 ? C2' FMN 401 A 1 HETATM 21 O O2' FMN . . . B 2 3.171 -2.037 3.457 1 19.23 ? O2' FMN 401 A 1 HETATM 22 C C3' FMN . . . B 2 1.722 -1.899 1.576 1 15.78 ? C3' FMN 401 A 1 HETATM 23 O O3' FMN . . . B 2 1.954 -0.563 1.203 1 19.38 ? O3' FMN 401 A 1 HETATM 24 C C4' FMN . . . B 2 0.379 -2.342 0.994 1 19.8 ? C4' FMN 401 A 1 HETATM 25 O O4' FMN . . . B 2 -0.737 -1.76 1.632 1 45.78 ? O4' FMN 401 A 1 HETATM 26 C C5' FMN . . . B 2 0.27 -3.863 1.039 1 34.59 ? C5' FMN 401 A 1 HETATM 27 O O5' FMN . . . B 2 -0.569 -4.251 -0.019 1 37.46 ? O5' FMN 401 A 1 HETATM 28 P P FMN . . . B 2 0.112 -4.698 -1.397 1 21.42 ? P FMN 401 A 1 HETATM 29 O O1P FMN . . . B 2 0.717 -6.071 -1.26 1 24.83 ? O1P FMN 401 A 1 HETATM 30 O O2P FMN . . . B 2 1.183 -3.704 -1.768 1 36.45 1 O2P FMN 401 A 1 HETATM 31 O O3P FMN . . . B 2 -0.967 -4.729 -2.446 1 28.62 ? O3P FMN 401 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 31 #