data_4JK6 # _model_server_result.job_id yjm9Pg6Q3R-rPslVzxXwog _model_server_result.datetime_utc '2024-11-04 20:55:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jk6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 4JK6 # _exptl.entry_id 4JK6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4JK6 _cell.length_a 121.219 _cell.length_b 121.219 _cell.length_c 42.731 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JK6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 A CYS 42 1_555 A SG CYS 47 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? disulf ? disulf2 A SG CYS 39 A CYS 50 1_555 A SG CYS 110 A CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 135 A CYS 136 1_555 A SG CYS 204 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf4 A SG CYS 167 A CYS 168 1_555 A SG CYS 183 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf5 A SG CYS 194 A CYS 191 1_555 A SG CYS 222 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? covale ? covale1 B SG CYS 2 B CYS 2 1_555 I C8 ZBR . B ZBR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.838 ? covale ? covale2 B SG CYS 9 B CYS 9 1_555 I C7 ZBR . B ZBR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.876 ? covale ? covale3 B C ARG 12 B ARG 12 1_555 B N DBB 13 B DBB 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 sing covale ? covale4 B C DBB 13 B DBB 13 1_555 B N SER 14 B SER 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 sing covale ? covale5 B SG CYS 16 B CYS 16 1_555 I C9 ZBR . B ZBR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.838 ? covale ? covale6 B C GLY 17 B GLY 17 1_555 B N NH2 18 B NH2 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 sing # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 351 n n S O2 SO4 doub 352 n n S O3 SO4 sing 353 n n S O4 SO4 sing 354 n n # _atom_sites.entry_id 4JK6 _atom_sites.fract_transf_matrix[1][1] 0.00825 _atom_sites.fract_transf_matrix[1][2] 0.004763 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009526 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023402 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 301 1 SO4 SO4 . D 3 SO4 A 1 302 2 SO4 SO4 . E 3 SO4 A 1 303 3 SO4 SO4 . F 3 SO4 A 1 304 4 SO4 SO4 . G 4 CL A 1 305 5 CL CL . H 5 P6G A 1 306 6 P6G P6G . I 6 ZBR B 1 101 19 ZBR LIG . J 7 HOH A 1 401 1 HOH HOH . J 7 HOH A 2 402 2 HOH HOH . J 7 HOH A 3 403 3 HOH HOH . J 7 HOH A 4 404 4 HOH HOH . J 7 HOH A 5 405 5 HOH HOH . J 7 HOH A 6 406 6 HOH HOH . J 7 HOH A 7 407 7 HOH HOH . J 7 HOH A 8 408 8 HOH HOH . J 7 HOH A 9 409 9 HOH HOH . J 7 HOH A 10 410 10 HOH HOH . J 7 HOH A 11 411 11 HOH HOH . J 7 HOH A 12 412 12 HOH HOH . J 7 HOH A 13 413 13 HOH HOH . J 7 HOH A 14 414 14 HOH HOH . J 7 HOH A 15 415 15 HOH HOH . J 7 HOH A 16 416 16 HOH HOH . J 7 HOH A 17 417 17 HOH HOH . J 7 HOH A 18 418 18 HOH HOH . J 7 HOH A 19 419 19 HOH HOH . J 7 HOH A 20 420 20 HOH HOH . J 7 HOH A 21 421 21 HOH HOH . J 7 HOH A 22 422 23 HOH HOH . J 7 HOH A 23 423 24 HOH HOH . J 7 HOH A 24 424 25 HOH HOH . J 7 HOH A 25 425 26 HOH HOH . J 7 HOH A 26 426 27 HOH HOH . J 7 HOH A 27 427 28 HOH HOH . J 7 HOH A 28 428 29 HOH HOH . J 7 HOH A 29 429 30 HOH HOH . J 7 HOH A 30 430 31 HOH HOH . J 7 HOH A 31 431 32 HOH HOH . J 7 HOH A 32 432 34 HOH HOH . J 7 HOH A 33 433 35 HOH HOH . J 7 HOH A 34 434 36 HOH HOH . J 7 HOH A 35 435 37 HOH HOH . J 7 HOH A 36 436 38 HOH HOH . J 7 HOH A 37 437 39 HOH HOH . J 7 HOH A 38 438 40 HOH HOH . J 7 HOH A 39 439 41 HOH HOH . J 7 HOH A 40 440 42 HOH HOH . J 7 HOH A 41 441 43 HOH HOH . J 7 HOH A 42 442 44 HOH HOH . J 7 HOH A 43 443 45 HOH HOH . J 7 HOH A 44 444 46 HOH HOH . J 7 HOH A 45 445 47 HOH HOH . J 7 HOH A 46 446 48 HOH HOH . J 7 HOH A 47 447 49 HOH HOH . J 7 HOH A 48 448 50 HOH HOH . J 7 HOH A 49 449 51 HOH HOH . J 7 HOH A 50 450 52 HOH HOH . J 7 HOH A 51 451 53 HOH HOH . J 7 HOH A 52 452 55 HOH HOH . J 7 HOH A 53 453 56 HOH HOH . J 7 HOH A 54 454 57 HOH HOH . J 7 HOH A 55 455 58 HOH HOH . J 7 HOH A 56 456 59 HOH HOH . J 7 HOH A 57 457 60 HOH HOH . J 7 HOH A 58 458 61 HOH HOH . J 7 HOH A 59 459 62 HOH HOH . J 7 HOH A 60 460 63 HOH HOH . J 7 HOH A 61 461 64 HOH HOH . J 7 HOH A 62 462 65 HOH HOH . J 7 HOH A 63 463 66 HOH HOH . J 7 HOH A 64 464 67 HOH HOH . J 7 HOH A 65 465 68 HOH HOH . J 7 HOH A 66 466 69 HOH HOH . J 7 HOH A 67 467 70 HOH HOH . J 7 HOH A 68 468 71 HOH HOH . J 7 HOH A 69 469 72 HOH HOH . J 7 HOH A 70 470 73 HOH HOH . J 7 HOH A 71 471 74 HOH HOH . J 7 HOH A 72 472 75 HOH HOH . J 7 HOH A 73 473 76 HOH HOH . J 7 HOH A 74 474 77 HOH HOH . J 7 HOH A 75 475 78 HOH HOH . J 7 HOH A 76 476 79 HOH HOH . J 7 HOH A 77 477 80 HOH HOH . J 7 HOH A 78 478 81 HOH HOH . J 7 HOH A 79 479 82 HOH HOH . J 7 HOH A 80 480 83 HOH HOH . J 7 HOH A 81 481 84 HOH HOH . J 7 HOH A 82 482 85 HOH HOH . J 7 HOH A 83 483 86 HOH HOH . J 7 HOH A 84 484 87 HOH HOH . J 7 HOH A 85 485 88 HOH HOH . J 7 HOH A 86 486 89 HOH HOH . J 7 HOH A 87 487 90 HOH HOH . J 7 HOH A 88 488 91 HOH HOH . J 7 HOH A 89 489 92 HOH HOH . J 7 HOH A 90 490 93 HOH HOH . J 7 HOH A 91 491 94 HOH HOH . J 7 HOH A 92 492 95 HOH HOH . J 7 HOH A 93 493 96 HOH HOH . J 7 HOH A 94 494 97 HOH HOH . J 7 HOH A 95 495 98 HOH HOH . J 7 HOH A 96 496 99 HOH HOH . J 7 HOH A 97 497 100 HOH HOH . J 7 HOH A 98 498 101 HOH HOH . J 7 HOH A 99 499 102 HOH HOH . J 7 HOH A 100 500 103 HOH HOH . J 7 HOH A 101 501 105 HOH HOH . J 7 HOH A 102 502 106 HOH HOH . J 7 HOH A 103 503 107 HOH HOH . J 7 HOH A 104 504 109 HOH HOH . J 7 HOH A 105 505 110 HOH HOH . K 7 HOH B 1 201 22 HOH HOH . K 7 HOH B 2 202 33 HOH HOH . K 7 HOH B 3 203 54 HOH HOH . K 7 HOH B 4 204 104 HOH HOH . K 7 HOH B 5 205 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 -34.269 96.788 -2.781 1 72.3 ? S SO4 302 A 1 HETATM 2 O O1 SO4 . . . D 3 -34.099 95.448 -3.386 1 70.94 ? O1 SO4 302 A 1 HETATM 3 O O2 SO4 . . . D 3 -35.29 97.552 -3.547 1 55.38 ? O2 SO4 302 A 1 HETATM 4 O O3 SO4 . . . D 3 -33.001 97.555 -2.796 1 71.02 ? O3 SO4 302 A 1 HETATM 5 O O4 SO4 . . . D 3 -34.596 96.546 -1.35 1 71.96 ? O4 SO4 302 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #