data_4JKV # _model_server_result.job_id kxc1UXnpMmntedG1EiRYTg _model_server_result.datetime_utc '2024-11-14 17:40:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jkv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":609}' # _entry.id 4JKV # _exptl.entry_id 4JKV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.27 _cell.angle_gamma 90 _cell.entry_id 4JKV _cell.length_a 75.444 _cell.length_b 98.177 _cell.length_c 84.293 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JKV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 113 A CYS 193 1_555 A SG CYS 133 A CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 137 A CYS 217 1_555 A SG CYS 215 A CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 234 A CYS 314 1_555 A SG CYS 310 A CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf4 A SG CYS 410 A CYS 490 1_555 A SG CYS 427 A CYS 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 B SG CYS 113 B CYS 193 1_555 B SG CYS 133 B CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf6 B SG CYS 137 B CYS 217 1_555 B SG CYS 215 B CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf7 B SG CYS 234 B CYS 314 1_555 B SG CYS 310 B CYS 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf8 B SG CYS 410 B CYS 490 1_555 B SG CYS 427 B CYS 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 435 n n O1 HO1 PG4 sing 436 n n C1 C2 PG4 sing 437 n n C1 H11 PG4 sing 438 n n C1 H12 PG4 sing 439 n n C2 O2 PG4 sing 440 n n C2 H21 PG4 sing 441 n n C2 H22 PG4 sing 442 n n O2 C3 PG4 sing 443 n n C3 C4 PG4 sing 444 n n C3 H31 PG4 sing 445 n n C3 H32 PG4 sing 446 n n C4 O3 PG4 sing 447 n n C4 H41 PG4 sing 448 n n C4 H42 PG4 sing 449 n n O3 C5 PG4 sing 450 n n C5 C6 PG4 sing 451 n n C5 H51 PG4 sing 452 n n C5 H52 PG4 sing 453 n n C6 O4 PG4 sing 454 n n C6 H61 PG4 sing 455 n n C6 H62 PG4 sing 456 n n O4 C7 PG4 sing 457 n n C7 C8 PG4 sing 458 n n C7 H71 PG4 sing 459 n n C7 H72 PG4 sing 460 n n C8 O5 PG4 sing 461 n n C8 H81 PG4 sing 462 n n C8 H82 PG4 sing 463 n n O5 HO5 PG4 sing 464 n n # _atom_sites.entry_id 4JKV _atom_sites.fract_transf_matrix[1][1] 0.013255 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003126 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010186 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012189 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1KS A 1 601 601 1KS 1KS . D 3 OLC A 1 602 602 OLC OLC . E 3 OLC A 1 603 603 OLC OLC . F 3 OLC A 1 604 604 OLC OLC . G 4 OLA A 1 605 605 OLA OLA . H 4 OLA A 1 606 606 OLA OLA . I 5 PEG A 1 607 607 PEG PEG . J 6 PGE A 1 608 608 PGE PGE . K 7 PG4 A 1 609 609 PG4 PG4 . L 2 1KS B 1 601 601 1KS 1KS . M 3 OLC B 1 602 602 OLC OLC . N 3 OLC B 1 603 603 OLC OLC . O 4 OLA B 1 604 604 OLA OLA . P 5 PEG B 1 605 605 PEG PEG . Q 8 HOH A 1 701 701 HOH HOH . Q 8 HOH A 2 702 702 HOH HOH . Q 8 HOH A 3 703 703 HOH HOH . Q 8 HOH A 4 704 704 HOH HOH . Q 8 HOH A 5 705 705 HOH HOH . Q 8 HOH A 6 706 706 HOH HOH . Q 8 HOH A 7 707 707 HOH HOH . Q 8 HOH A 8 708 708 HOH HOH . Q 8 HOH A 9 709 709 HOH HOH . Q 8 HOH A 10 710 710 HOH HOH . Q 8 HOH A 11 711 711 HOH HOH . Q 8 HOH A 12 712 712 HOH HOH . Q 8 HOH A 13 713 713 HOH HOH . Q 8 HOH A 14 714 714 HOH HOH . Q 8 HOH A 15 715 715 HOH HOH . Q 8 HOH A 16 716 716 HOH HOH . Q 8 HOH A 17 717 717 HOH HOH . Q 8 HOH A 18 718 718 HOH HOH . Q 8 HOH A 19 719 719 HOH HOH . Q 8 HOH A 20 720 720 HOH HOH . Q 8 HOH A 21 721 721 HOH HOH . Q 8 HOH A 22 722 722 HOH HOH . Q 8 HOH A 23 723 723 HOH HOH . Q 8 HOH A 24 724 724 HOH HOH . Q 8 HOH A 25 725 725 HOH HOH . Q 8 HOH A 26 726 726 HOH HOH . Q 8 HOH A 27 727 727 HOH HOH . Q 8 HOH A 28 728 728 HOH HOH . Q 8 HOH A 29 729 729 HOH HOH . Q 8 HOH A 30 730 730 HOH HOH . Q 8 HOH A 31 731 731 HOH HOH . Q 8 HOH A 32 732 732 HOH HOH . Q 8 HOH A 33 733 733 HOH HOH . Q 8 HOH A 34 734 734 HOH HOH . Q 8 HOH A 35 735 735 HOH HOH . Q 8 HOH A 36 736 736 HOH HOH . Q 8 HOH A 37 737 737 HOH HOH . Q 8 HOH A 38 738 738 HOH HOH . Q 8 HOH A 39 739 739 HOH HOH . Q 8 HOH A 40 740 740 HOH HOH . Q 8 HOH A 41 741 741 HOH HOH . Q 8 HOH A 42 742 742 HOH HOH . Q 8 HOH A 43 743 743 HOH HOH . Q 8 HOH A 44 744 744 HOH HOH . Q 8 HOH A 45 745 745 HOH HOH . Q 8 HOH A 46 746 746 HOH HOH . Q 8 HOH A 47 747 747 HOH HOH . Q 8 HOH A 48 748 748 HOH HOH . Q 8 HOH A 49 749 729 HOH HOH . R 8 HOH B 1 701 701 HOH HOH . R 8 HOH B 2 702 702 HOH HOH . R 8 HOH B 3 703 703 HOH HOH . R 8 HOH B 4 704 704 HOH HOH . R 8 HOH B 5 705 705 HOH HOH . R 8 HOH B 6 706 706 HOH HOH . R 8 HOH B 7 707 707 HOH HOH . R 8 HOH B 8 708 708 HOH HOH . R 8 HOH B 9 709 709 HOH HOH . R 8 HOH B 10 710 710 HOH HOH . R 8 HOH B 11 711 711 HOH HOH . R 8 HOH B 12 712 712 HOH HOH . R 8 HOH B 13 713 713 HOH HOH . R 8 HOH B 14 714 714 HOH HOH . R 8 HOH B 15 715 715 HOH HOH . R 8 HOH B 16 716 716 HOH HOH . R 8 HOH B 17 717 717 HOH HOH . R 8 HOH B 18 718 718 HOH HOH . R 8 HOH B 19 719 719 HOH HOH . R 8 HOH B 20 720 720 HOH HOH . R 8 HOH B 21 721 721 HOH HOH . R 8 HOH B 22 722 722 HOH HOH . R 8 HOH B 23 723 723 HOH HOH . R 8 HOH B 24 724 724 HOH HOH . R 8 HOH B 25 725 725 HOH HOH . R 8 HOH B 26 726 726 HOH HOH . R 8 HOH B 27 727 727 HOH HOH . R 8 HOH B 28 728 728 HOH HOH . R 8 HOH B 29 729 730 HOH HOH . R 8 HOH B 30 730 731 HOH HOH . R 8 HOH B 31 731 732 HOH HOH . R 8 HOH B 32 732 733 HOH HOH . R 8 HOH B 33 733 734 HOH HOH . R 8 HOH B 34 734 735 HOH HOH . R 8 HOH B 35 735 736 HOH HOH . R 8 HOH B 36 736 737 HOH HOH . R 8 HOH B 37 737 738 HOH HOH . R 8 HOH B 38 738 739 HOH HOH . R 8 HOH B 39 739 740 HOH HOH . R 8 HOH B 40 740 741 HOH HOH . R 8 HOH B 41 741 742 HOH HOH . R 8 HOH B 42 742 743 HOH HOH . R 8 HOH B 43 743 744 HOH HOH . R 8 HOH B 44 744 745 HOH HOH . R 8 HOH B 45 745 746 HOH HOH . R 8 HOH B 46 746 747 HOH HOH . R 8 HOH B 47 747 748 HOH HOH . R 8 HOH B 48 748 749 HOH HOH . R 8 HOH B 49 749 750 HOH HOH . R 8 HOH B 50 750 751 HOH HOH . R 8 HOH B 51 751 752 HOH HOH . R 8 HOH B 52 752 753 HOH HOH . R 8 HOH B 53 753 754 HOH HOH . R 8 HOH B 54 754 755 HOH HOH . R 8 HOH B 55 755 756 HOH HOH . R 8 HOH B 56 756 757 HOH HOH . R 8 HOH B 57 757 758 HOH HOH . R 8 HOH B 58 758 759 HOH HOH . R 8 HOH B 59 759 760 HOH HOH . R 8 HOH B 60 760 761 HOH HOH . R 8 HOH B 61 761 762 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . K 7 -39.032 27.33 34.956 1 103 ? O1 PG4 609 A 1 HETATM 2 C C1 PG4 . . . K 7 -38.212 28.49 34.935 1 102.65 ? C1 PG4 609 A 1 HETATM 3 C C2 PG4 . . . K 7 -36.886 28.231 34.277 1 102.49 ? C2 PG4 609 A 1 HETATM 4 O O2 PG4 . . . K 7 -36.092 29.412 34.291 1 102.75 ? O2 PG4 609 A 1 HETATM 5 C C3 PG4 . . . K 7 -35.736 29.871 32.993 1 102.4 ? C3 PG4 609 A 1 HETATM 6 C C4 PG4 . . . K 7 -36.277 31.242 32.716 1 101.73 ? C4 PG4 609 A 1 HETATM 7 O O3 PG4 . . . K 7 -36.049 31.576 31.353 1 101 ? O3 PG4 609 A 1 HETATM 8 C C5 PG4 . . . K 7 -36.458 32.895 31.009 1 99.11 ? C5 PG4 609 A 1 HETATM 9 C C6 PG4 . . . K 7 -35.559 33.468 29.955 1 97.12 ? C6 PG4 609 A 1 HETATM 10 O O4 PG4 . . . K 7 -34.209 33.439 30.401 1 95.83 ? O4 PG4 609 A 1 HETATM 11 C C7 PG4 . . . K 7 -33.469 34.607 30.077 1 93.76 ? C7 PG4 609 A 1 HETATM 12 C C8 PG4 . . . K 7 -32.02 34.414 30.43 1 92.69 ? C8 PG4 609 A 1 HETATM 13 O O5 PG4 . . . K 7 -31.416 33.35 29.696 1 90.74 ? O5 PG4 609 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #