data_4JLN # _model_server_result.job_id '_XDjatZAQYTE4ZFhg3C9PA' _model_server_result.datetime_utc '2024-10-13 00:19:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jln # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 4JLN # _exptl.entry_id 4JLN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 449.565 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[({2-[3-(2-fluoroethoxy)-4-methoxyphenyl]-5-propyl-1,3-thiazol-4-yl}methyl)sulfanyl]pyrimidine-4,6-diamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JLN _cell.length_a 68.65 _cell.length_b 68.65 _cell.length_c 120.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JLN _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C20 H24 F N5 O2 S2' _chem_comp.formula_weight 449.565 _chem_comp.id 18V _chem_comp.mon_nstd_flag . _chem_comp.name 2-[({2-[3-(2-fluoroethoxy)-4-methoxyphenyl]-5-propyl-1,3-thiazol-4-yl}methyl)sulfanyl]pyrimidine-4,6-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAJ CAM 18V sing 1 n n CAJ CAA 18V sing 2 n n CAM CBC 18V sing 3 n n SAU CBC 18V sing 4 n y SAU CBD 18V sing 5 n y CBC CBB 18V doub 6 n y CAF CAG 18V doub 7 n y CAF CAX 18V sing 8 n y CAB OAR 18V sing 9 n n CAG CAZ 18V sing 10 n y NAC C6 18V sing 11 n n C5 C6 18V doub 12 n y C5 C4 18V sing 13 n y C6 N1 18V sing 14 n y CBD CAX 18V sing 15 n n CBD NAQ 18V doub 16 n y NAD C4 18V sing 17 n n C4 N3 18V doub 18 n y N1 C2 18V doub 19 n y CAX CAI 18V doub 20 n y N3 C2 18V sing 21 n y C2 SAT 18V sing 22 n n CBB NAQ 18V sing 23 n y CBB CAN 18V sing 24 n n CAZ OAR 18V sing 25 n n CAZ CBA 18V doub 26 n y SAT CAN 18V sing 27 n n CAI CBA 18V sing 28 n y CBA OAS 18V sing 29 n n OAS CAL 18V sing 30 n n CAL CAK 18V sing 31 n n CAK FAE 18V sing 32 n n CAK H1 18V sing 33 n n CAK H2 18V sing 34 n n CAL H3 18V sing 35 n n CAL H4 18V sing 36 n n CAI H5 18V sing 37 n n CAB H6 18V sing 38 n n CAB H7 18V sing 39 n n CAB H8 18V sing 40 n n CAG H9 18V sing 41 n n CAF H10 18V sing 42 n n CAM H11 18V sing 43 n n CAM H12 18V sing 44 n n CAJ H13 18V sing 45 n n CAJ H14 18V sing 46 n n CAA H15 18V sing 47 n n CAA H16 18V sing 48 n n CAA H17 18V sing 49 n n CAN H18 18V sing 50 n n CAN H19 18V sing 51 n n NAC H20 18V sing 52 n n NAC H21 18V sing 53 n n C5 H22 18V sing 54 n n NAD H23 18V sing 55 n n NAD H24 18V sing 56 n n # _atom_sites.entry_id 4JLN _atom_sites.fract_transf_matrix[1][1] 0.014567 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014567 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00833 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 18V A 1 301 301 18V DRG . D 3 UDP A 1 302 401 UDP UDP . E 2 18V B 1 301 301 18V DRG . F 3 UDP B 1 302 401 UDP UDP . G 4 HOH A 1 401 2 HOH HOH . G 4 HOH A 2 402 3 HOH HOH . G 4 HOH A 3 403 5 HOH HOH . G 4 HOH A 4 404 6 HOH HOH . G 4 HOH A 5 405 7 HOH HOH . G 4 HOH A 6 406 9 HOH HOH . G 4 HOH A 7 407 14 HOH HOH . G 4 HOH A 8 408 19 HOH HOH . G 4 HOH A 9 409 21 HOH HOH . G 4 HOH A 10 410 22 HOH HOH . G 4 HOH A 11 411 27 HOH HOH . G 4 HOH A 12 412 28 HOH HOH . G 4 HOH A 13 413 29 HOH HOH . G 4 HOH A 14 414 30 HOH HOH . G 4 HOH A 15 415 35 HOH HOH . G 4 HOH A 16 416 36 HOH HOH . G 4 HOH A 17 417 39 HOH HOH . G 4 HOH A 18 418 40 HOH HOH . G 4 HOH A 19 419 41 HOH HOH . G 4 HOH A 20 420 42 HOH HOH . G 4 HOH A 21 421 49 HOH HOH . G 4 HOH A 22 422 51 HOH HOH . G 4 HOH A 23 423 53 HOH HOH . G 4 HOH A 24 424 54 HOH HOH . G 4 HOH A 25 425 55 HOH HOH . G 4 HOH A 26 426 56 HOH HOH . G 4 HOH A 27 427 57 HOH HOH . G 4 HOH A 28 428 59 HOH HOH . G 4 HOH A 29 429 61 HOH HOH . G 4 HOH A 30 430 65 HOH HOH . G 4 HOH A 31 431 66 HOH HOH . G 4 HOH A 32 432 67 HOH HOH . G 4 HOH A 33 433 68 HOH HOH . G 4 HOH A 34 434 69 HOH HOH . G 4 HOH A 35 435 71 HOH HOH . G 4 HOH A 36 436 73 HOH HOH . G 4 HOH A 37 437 74 HOH HOH . G 4 HOH A 38 438 75 HOH HOH . G 4 HOH A 39 439 76 HOH HOH . G 4 HOH A 40 440 77 HOH HOH . G 4 HOH A 41 441 78 HOH HOH . G 4 HOH A 42 442 80 HOH HOH . G 4 HOH A 43 443 83 HOH HOH . G 4 HOH A 44 444 89 HOH HOH . G 4 HOH A 45 445 90 HOH HOH . G 4 HOH A 46 446 92 HOH HOH . G 4 HOH A 47 447 93 HOH HOH . G 4 HOH A 48 448 94 HOH HOH . G 4 HOH A 49 449 95 HOH HOH . G 4 HOH A 50 450 99 HOH HOH . G 4 HOH A 51 451 100 HOH HOH . G 4 HOH A 52 452 109 HOH HOH . G 4 HOH A 53 453 110 HOH HOH . H 4 HOH B 1 401 1 HOH HOH . H 4 HOH B 2 402 4 HOH HOH . H 4 HOH B 3 403 8 HOH HOH . H 4 HOH B 4 404 10 HOH HOH . H 4 HOH B 5 405 11 HOH HOH . H 4 HOH B 6 406 12 HOH HOH . H 4 HOH B 7 407 13 HOH HOH . H 4 HOH B 8 408 15 HOH HOH . H 4 HOH B 9 409 16 HOH HOH . H 4 HOH B 10 410 17 HOH HOH . H 4 HOH B 11 411 18 HOH HOH . H 4 HOH B 12 412 20 HOH HOH . H 4 HOH B 13 413 23 HOH HOH . H 4 HOH B 14 414 24 HOH HOH . H 4 HOH B 15 415 25 HOH HOH . H 4 HOH B 16 416 26 HOH HOH . H 4 HOH B 17 417 31 HOH HOH . H 4 HOH B 18 418 32 HOH HOH . H 4 HOH B 19 419 33 HOH HOH . H 4 HOH B 20 420 34 HOH HOH . H 4 HOH B 21 421 37 HOH HOH . H 4 HOH B 22 422 38 HOH HOH . H 4 HOH B 23 423 43 HOH HOH . H 4 HOH B 24 424 44 HOH HOH . H 4 HOH B 25 425 45 HOH HOH . H 4 HOH B 26 426 46 HOH HOH . H 4 HOH B 27 427 47 HOH HOH . H 4 HOH B 28 428 48 HOH HOH . H 4 HOH B 29 429 50 HOH HOH . H 4 HOH B 30 430 52 HOH HOH . H 4 HOH B 31 431 58 HOH HOH . H 4 HOH B 32 432 60 HOH HOH . H 4 HOH B 33 433 62 HOH HOH . H 4 HOH B 34 434 63 HOH HOH . H 4 HOH B 35 435 64 HOH HOH . H 4 HOH B 36 436 70 HOH HOH . H 4 HOH B 37 437 72 HOH HOH . H 4 HOH B 38 438 79 HOH HOH . H 4 HOH B 39 439 81 HOH HOH . H 4 HOH B 40 440 82 HOH HOH . H 4 HOH B 41 441 84 HOH HOH . H 4 HOH B 42 442 85 HOH HOH . H 4 HOH B 43 443 86 HOH HOH . H 4 HOH B 44 444 87 HOH HOH . H 4 HOH B 45 445 88 HOH HOH . H 4 HOH B 46 446 91 HOH HOH . H 4 HOH B 47 447 96 HOH HOH . H 4 HOH B 48 448 97 HOH HOH . H 4 HOH B 49 449 98 HOH HOH . H 4 HOH B 50 450 101 HOH HOH . H 4 HOH B 51 451 102 HOH HOH . H 4 HOH B 52 452 103 HOH HOH . H 4 HOH B 53 453 104 HOH HOH . H 4 HOH B 54 454 105 HOH HOH . H 4 HOH B 55 455 106 HOH HOH . H 4 HOH B 56 456 107 HOH HOH . H 4 HOH B 57 457 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FAE 18V . . . E 2 -36.303 -7.939 -26.141 1 47.64 ? FAE 18V 301 B 1 HETATM 2 C CAK 18V . . . E 2 -36.246 -7.571 -24.839 1 41.52 ? CAK 18V 301 B 1 HETATM 3 C CAL 18V . . . E 2 -35.419 -8.625 -24.113 1 42.37 ? CAL 18V 301 B 1 HETATM 4 O OAS 18V . . . E 2 -36.143 -9.854 -24.197 1 40.3 ? OAS 18V 301 B 1 HETATM 5 C CBA 18V . . . E 2 -35.724 -10.764 -23.289 1 40.59 ? CBA 18V 301 B 1 HETATM 6 C CAI 18V . . . E 2 -34.38 -11.115 -23.12 1 40.16 ? CAI 18V 301 B 1 HETATM 7 C CAZ 18V . . . E 2 -36.728 -11.346 -22.524 1 40.8 ? CAZ 18V 301 B 1 HETATM 8 O OAR 18V . . . E 2 -38.005 -10.91 -22.79 1 41.45 ? OAR 18V 301 B 1 HETATM 9 C CAB 18V . . . E 2 -39.052 -11.4 -21.918 1 40.38 ? CAB 18V 301 B 1 HETATM 10 C CAG 18V . . . E 2 -36.387 -12.301 -21.562 1 40.37 ? CAG 18V 301 B 1 HETATM 11 C CAF 18V . . . E 2 -35.047 -12.657 -21.389 1 38.7 ? CAF 18V 301 B 1 HETATM 12 C CAX 18V . . . E 2 -34.033 -12.057 -22.15 1 41.03 ? CAX 18V 301 B 1 HETATM 13 C CBD 18V . . . E 2 -32.745 -12.416 -21.996 1 38.82 ? CBD 18V 301 B 1 HETATM 14 N NAQ 18V . . . E 2 -31.759 -12.034 -22.796 1 41.18 ? NAQ 18V 301 B 1 HETATM 15 S SAU 18V . . . E 2 -32.121 -13.421 -20.851 1 39.69 ? SAU 18V 301 B 1 HETATM 16 C CBC 18V . . . E 2 -30.584 -13.342 -21.384 1 38.86 ? CBC 18V 301 B 1 HETATM 17 C CAM 18V . . . E 2 -29.377 -14.077 -20.766 1 35.98 ? CAM 18V 301 B 1 HETATM 18 C CAJ 18V . . . E 2 -29.519 -15.592 -20.976 1 35.27 ? CAJ 18V 301 B 1 HETATM 19 C CAA 18V . . . E 2 -29.465 -15.954 -22.47 1 34.84 ? CAA 18V 301 B 1 HETATM 20 C CBB 18V . . . E 2 -30.558 -12.542 -22.452 1 40.15 ? CBB 18V 301 B 1 HETATM 21 C CAN 18V . . . E 2 -29.293 -12.228 -23.248 1 38.99 ? CAN 18V 301 B 1 HETATM 22 S SAT 18V . . . E 2 -28.527 -10.621 -22.833 1 41.22 ? SAT 18V 301 B 1 HETATM 23 C C2 18V . . . E 2 -26.872 -11.069 -22.459 1 35.54 ? C2 18V 301 B 1 HETATM 24 N N3 18V . . . E 2 -26.495 -12.359 -22.423 1 35.14 ? N3 18V 301 B 1 HETATM 25 N N1 18V . . . E 2 -25.988 -10.083 -22.211 1 34.27 ? N1 18V 301 B 1 HETATM 26 C C6 18V . . . E 2 -24.705 -10.365 -21.935 1 33.36 ? C6 18V 301 B 1 HETATM 27 N NAC 18V . . . E 2 -23.838 -9.381 -21.727 1 30.53 ? NAC 18V 301 B 1 HETATM 28 C C5 18V . . . E 2 -24.284 -11.691 -21.904 1 32.82 ? C5 18V 301 B 1 HETATM 29 C C4 18V . . . E 2 -25.218 -12.69 -22.16 1 35.15 ? C4 18V 301 B 1 HETATM 30 N NAD 18V . . . E 2 -24.853 -13.975 -22.122 1 34.43 ? NAD 18V 301 B 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 30 #