data_4JLT
#
_model_server_result.job_id            LF_m9YRMkDvRf_d2qVXnRw 
_model_server_result.datetime_utc      '2024-10-11 01:20:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4jlt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":510}' 
#
_entry.id    4JLT 
#
_exptl.entry_id    4JLT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4JLT 
_cell.length_a            90.76 
_cell.length_b            90.76 
_cell.length_c            153.681 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4JLT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             417 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              436 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            FE 
_struct_conn.ptnr2_label_comp_id            HEM 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             HEM 
_struct_conn.ptnr2_auth_seq_id              501 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.576 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 254 n n 
C1 C2 GOL sing 255 n n 
C1 H11 GOL sing 256 n n 
C1 H12 GOL sing 257 n n 
O1 HO1 GOL sing 258 n n 
C2 O2 GOL sing 259 n n 
C2 C3 GOL sing 260 n n 
C2 H2 GOL sing 261 n n 
O2 HO2 GOL sing 262 n n 
C3 O3 GOL sing 263 n n 
C3 H31 GOL sing 264 n n 
C3 H32 GOL sing 265 n n 
O3 HO3 GOL sing 266 n n 
#
_atom_sites.entry_id                     4JLT 
_atom_sites.fract_transf_matrix[1][1]    0.011018 
_atom_sites.fract_transf_matrix[1][2]    0.006361 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012723 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006507 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 501 500 HEM HEM . 
C 3 CM5 A 1 502 601 CM5 CM5 . 
D 3 CM5 A 1 503 602 CM5 CM5 . 
E 3 CM5 A 1 504 603 CM5 CM5 . 
F 4 8PR A 1 505 604 8PR 8PR . 
G 5 SO4 A 1 506 605 SO4 SO4 . 
H 5 SO4 A 1 507 606 SO4 SO4 . 
I 5 SO4 A 1 508 607 SO4 SO4 . 
J 5 SO4 A 1 509 608 SO4 SO4 . 
K 6 GOL A 1 510 609 GOL GOL . 
L 7 PO4 A 1 511 610 PO4 PO4 . 
M 7 PO4 A 1 512 611 PO4 PO4 . 
N 8 HOH A 1 601 1 HOH HOH . 
N 8 HOH A 2 602 2 HOH HOH . 
N 8 HOH A 3 603 3 HOH HOH . 
N 8 HOH A 4 604 4 HOH HOH . 
N 8 HOH A 5 605 5 HOH HOH . 
N 8 HOH A 6 606 6 HOH HOH . 
N 8 HOH A 7 607 7 HOH HOH . 
N 8 HOH A 8 608 8 HOH HOH . 
N 8 HOH A 9 609 9 HOH HOH . 
N 8 HOH A 10 610 10 HOH HOH . 
N 8 HOH A 11 611 11 HOH HOH . 
N 8 HOH A 12 612 12 HOH HOH . 
N 8 HOH A 13 613 13 HOH HOH . 
N 8 HOH A 14 614 14 HOH HOH . 
N 8 HOH A 15 615 15 HOH HOH . 
N 8 HOH A 16 616 16 HOH HOH . 
N 8 HOH A 17 617 17 HOH HOH . 
N 8 HOH A 18 618 18 HOH HOH . 
N 8 HOH A 19 619 19 HOH HOH . 
N 8 HOH A 20 620 496 HOH HOH . 
N 8 HOH A 21 621 497 HOH HOH . 
N 8 HOH A 22 622 498 HOH HOH . 
N 8 HOH A 23 623 499 HOH HOH . 
N 8 HOH A 24 624 501 HOH HOH . 
N 8 HOH A 25 625 502 HOH HOH . 
N 8 HOH A 26 626 503 HOH HOH . 
N 8 HOH A 27 627 504 HOH HOH . 
N 8 HOH A 28 628 505 HOH HOH . 
N 8 HOH A 29 629 506 HOH HOH . 
N 8 HOH A 30 630 507 HOH HOH . 
N 8 HOH A 31 631 508 HOH HOH . 
N 8 HOH A 32 632 509 HOH HOH . 
N 8 HOH A 33 633 510 HOH HOH . 
N 8 HOH A 34 634 511 HOH HOH . 
N 8 HOH A 35 635 512 HOH HOH . 
N 8 HOH A 36 636 513 HOH HOH . 
N 8 HOH A 37 637 514 HOH HOH . 
N 8 HOH A 38 638 515 HOH HOH . 
N 8 HOH A 39 639 516 HOH HOH . 
N 8 HOH A 40 640 517 HOH HOH . 
N 8 HOH A 41 641 518 HOH HOH . 
N 8 HOH A 42 642 519 HOH HOH . 
N 8 HOH A 43 643 520 HOH HOH . 
N 8 HOH A 44 644 521 HOH HOH . 
N 8 HOH A 45 645 522 HOH HOH . 
N 8 HOH A 46 646 523 HOH HOH . 
N 8 HOH A 47 647 524 HOH HOH . 
N 8 HOH A 48 648 525 HOH HOH . 
N 8 HOH A 49 649 526 HOH HOH . 
N 8 HOH A 50 650 527 HOH HOH . 
N 8 HOH A 51 651 528 HOH HOH . 
N 8 HOH A 52 652 529 HOH HOH . 
N 8 HOH A 53 653 530 HOH HOH . 
N 8 HOH A 54 654 531 HOH HOH . 
N 8 HOH A 55 655 532 HOH HOH . 
N 8 HOH A 56 656 533 HOH HOH . 
N 8 HOH A 57 657 534 HOH HOH . 
N 8 HOH A 58 658 535 HOH HOH . 
N 8 HOH A 59 659 536 HOH HOH . 
N 8 HOH A 60 660 537 HOH HOH . 
N 8 HOH A 61 661 538 HOH HOH . 
N 8 HOH A 62 662 539 HOH HOH . 
N 8 HOH A 63 663 540 HOH HOH . 
N 8 HOH A 64 664 541 HOH HOH . 
N 8 HOH A 65 665 542 HOH HOH . 
N 8 HOH A 66 666 543 HOH HOH . 
N 8 HOH A 67 667 544 HOH HOH . 
N 8 HOH A 68 668 545 HOH HOH . 
N 8 HOH A 69 669 546 HOH HOH . 
N 8 HOH A 70 670 547 HOH HOH . 
N 8 HOH A 71 671 548 HOH HOH . 
N 8 HOH A 72 672 549 HOH HOH . 
N 8 HOH A 73 673 550 HOH HOH . 
N 8 HOH A 74 674 551 HOH HOH . 
N 8 HOH A 75 675 552 HOH HOH . 
N 8 HOH A 76 676 553 HOH HOH . 
N 8 HOH A 77 677 554 HOH HOH . 
N 8 HOH A 78 678 555 HOH HOH . 
N 8 HOH A 79 679 556 HOH HOH . 
N 8 HOH A 80 680 557 HOH HOH . 
N 8 HOH A 81 681 558 HOH HOH . 
N 8 HOH A 82 682 559 HOH HOH . 
N 8 HOH A 83 683 560 HOH HOH . 
N 8 HOH A 84 684 561 HOH HOH . 
N 8 HOH A 85 685 562 HOH HOH . 
N 8 HOH A 86 686 563 HOH HOH . 
N 8 HOH A 87 687 564 HOH HOH . 
N 8 HOH A 88 688 565 HOH HOH . 
N 8 HOH A 89 689 566 HOH HOH . 
N 8 HOH A 90 690 567 HOH HOH . 
N 8 HOH A 91 691 568 HOH HOH . 
N 8 HOH A 92 692 569 HOH HOH . 
N 8 HOH A 93 693 570 HOH HOH . 
N 8 HOH A 94 694 571 HOH HOH . 
N 8 HOH A 95 695 572 HOH HOH . 
N 8 HOH A 96 696 573 HOH HOH . 
N 8 HOH A 97 697 574 HOH HOH . 
N 8 HOH A 98 698 575 HOH HOH . 
N 8 HOH A 99 699 576 HOH HOH . 
N 8 HOH A 100 700 577 HOH HOH . 
N 8 HOH A 101 701 578 HOH HOH . 
N 8 HOH A 102 702 579 HOH HOH . 
N 8 HOH A 103 703 580 HOH HOH . 
N 8 HOH A 104 704 581 HOH HOH . 
N 8 HOH A 105 705 582 HOH HOH . 
N 8 HOH A 106 706 583 HOH HOH . 
N 8 HOH A 107 707 584 HOH HOH . 
N 8 HOH A 108 708 585 HOH HOH . 
N 8 HOH A 109 709 586 HOH HOH . 
N 8 HOH A 110 710 587 HOH HOH . 
N 8 HOH A 111 711 588 HOH HOH . 
N 8 HOH A 112 712 589 HOH HOH . 
N 8 HOH A 113 713 590 HOH HOH . 
N 8 HOH A 114 714 591 HOH HOH . 
N 8 HOH A 115 715 592 HOH HOH . 
N 8 HOH A 116 716 593 HOH HOH . 
N 8 HOH A 117 717 594 HOH HOH . 
N 8 HOH A 118 718 595 HOH HOH . 
N 8 HOH A 119 719 596 HOH HOH . 
N 8 HOH A 120 720 597 HOH HOH . 
N 8 HOH A 121 721 598 HOH HOH . 
N 8 HOH A 122 722 599 HOH HOH . 
N 8 HOH A 123 723 600 HOH HOH . 
N 8 HOH A 124 724 612 HOH HOH . 
N 8 HOH A 125 725 613 HOH HOH . 
N 8 HOH A 126 726 614 HOH HOH . 
N 8 HOH A 127 727 615 HOH HOH . 
N 8 HOH A 128 728 616 HOH HOH . 
N 8 HOH A 129 729 617 HOH HOH . 
N 8 HOH A 130 730 618 HOH HOH . 
N 8 HOH A 131 731 619 HOH HOH . 
N 8 HOH A 132 732 620 HOH HOH . 
N 8 HOH A 133 733 621 HOH HOH . 
N 8 HOH A 134 734 622 HOH HOH . 
N 8 HOH A 135 735 623 HOH HOH . 
N 8 HOH A 136 736 624 HOH HOH . 
N 8 HOH A 137 737 625 HOH HOH . 
N 8 HOH A 138 738 626 HOH HOH . 
N 8 HOH A 139 739 627 HOH HOH . 
N 8 HOH A 140 740 628 HOH HOH . 
N 8 HOH A 141 741 629 HOH HOH . 
N 8 HOH A 142 742 630 HOH HOH . 
N 8 HOH A 143 743 631 HOH HOH . 
N 8 HOH A 144 744 632 HOH HOH . 
N 8 HOH A 145 745 633 HOH HOH . 
N 8 HOH A 146 746 634 HOH HOH . 
N 8 HOH A 147 747 635 HOH HOH . 
N 8 HOH A 148 748 636 HOH HOH . 
N 8 HOH A 149 749 637 HOH HOH . 
N 8 HOH A 150 750 638 HOH HOH . 
N 8 HOH A 151 751 639 HOH HOH . 
N 8 HOH A 152 752 640 HOH HOH . 
N 8 HOH A 153 753 641 HOH HOH . 
N 8 HOH A 154 754 642 HOH HOH . 
N 8 HOH A 155 755 643 HOH HOH . 
N 8 HOH A 156 756 644 HOH HOH . 
N 8 HOH A 157 757 645 HOH HOH . 
N 8 HOH A 158 758 646 HOH HOH . 
N 8 HOH A 159 759 647 HOH HOH . 
N 8 HOH A 160 760 648 HOH HOH . 
N 8 HOH A 161 761 649 HOH HOH . 
N 8 HOH A 162 762 650 HOH HOH . 
N 8 HOH A 163 763 651 HOH HOH . 
N 8 HOH A 164 764 652 HOH HOH . 
N 8 HOH A 165 765 653 HOH HOH . 
N 8 HOH A 166 766 654 HOH HOH . 
N 8 HOH A 167 767 655 HOH HOH . 
N 8 HOH A 168 768 656 HOH HOH . 
N 8 HOH A 169 769 657 HOH HOH . 
N 8 HOH A 170 770 658 HOH HOH . 
N 8 HOH A 171 771 659 HOH HOH . 
N 8 HOH A 172 772 660 HOH HOH . 
N 8 HOH A 173 773 661 HOH HOH . 
N 8 HOH A 174 774 662 HOH HOH . 
N 8 HOH A 175 775 663 HOH HOH . 
N 8 HOH A 176 776 664 HOH HOH . 
N 8 HOH A 177 777 665 HOH HOH . 
N 8 HOH A 178 778 666 HOH HOH . 
N 8 HOH A 179 779 667 HOH HOH . 
N 8 HOH A 180 780 668 HOH HOH . 
N 8 HOH A 181 781 669 HOH HOH . 
N 8 HOH A 182 782 670 HOH HOH . 
N 8 HOH A 183 783 671 HOH HOH . 
N 8 HOH A 184 784 672 HOH HOH . 
N 8 HOH A 185 785 673 HOH HOH . 
N 8 HOH A 186 786 674 HOH HOH . 
N 8 HOH A 187 787 675 HOH HOH . 
N 8 HOH A 188 788 676 HOH HOH . 
N 8 HOH A 189 789 677 HOH HOH . 
N 8 HOH A 190 790 678 HOH HOH . 
N 8 HOH A 191 791 679 HOH HOH . 
N 8 HOH A 192 792 680 HOH HOH . 
N 8 HOH A 193 793 681 HOH HOH . 
N 8 HOH A 194 794 682 HOH HOH . 
N 8 HOH A 195 795 683 HOH HOH . 
N 8 HOH A 196 796 684 HOH HOH . 
N 8 HOH A 197 797 685 HOH HOH . 
N 8 HOH A 198 798 686 HOH HOH . 
N 8 HOH A 199 799 687 HOH HOH . 
N 8 HOH A 200 800 688 HOH HOH . 
N 8 HOH A 201 801 689 HOH HOH . 
N 8 HOH A 202 802 690 HOH HOH . 
N 8 HOH A 203 803 691 HOH HOH . 
N 8 HOH A 204 804 692 HOH HOH . 
N 8 HOH A 205 805 693 HOH HOH . 
N 8 HOH A 206 806 694 HOH HOH . 
N 8 HOH A 207 807 695 HOH HOH . 
N 8 HOH A 208 808 696 HOH HOH . 
N 8 HOH A 209 809 697 HOH HOH . 
N 8 HOH A 210 810 698 HOH HOH . 
N 8 HOH A 211 811 699 HOH HOH . 
N 8 HOH A 212 812 700 HOH HOH . 
N 8 HOH A 213 813 701 HOH HOH . 
N 8 HOH A 214 814 702 HOH HOH . 
N 8 HOH A 215 815 703 HOH HOH . 
N 8 HOH A 216 816 704 HOH HOH . 
N 8 HOH A 217 817 705 HOH HOH . 
N 8 HOH A 218 818 706 HOH HOH . 
N 8 HOH A 219 819 708 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . K 6 -41.939 16.165 8.805 1 59.54 ? C1 GOL 510 A 1 
HETATM 2 O O1 GOL . . . K 6 -42.995 15.267 8.847 1 59.63 ? O1 GOL 510 A 1 
HETATM 3 C C2 GOL . . . K 6 -41.71 16.708 10.188 1 58.67 ? C2 GOL 510 A 1 
HETATM 4 O O2 GOL . . . K 6 -42.919 17.187 10.713 1 59.05 ? O2 GOL 510 A 1 
HETATM 5 C C3 GOL . . . K 6 -40.623 17.769 10.207 1 57.73 ? C3 GOL 510 A 1 
HETATM 6 O O3 GOL . . . K 6 -39.386 17.234 10.579 1 50.29 ? O3 GOL 510 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           6 
#