data_4JOF
#
_model_server_result.job_id            kVXzCbV4MrHNuaHebWK56A 
_model_server_result.datetime_utc      '2025-09-01 08:13:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4jof 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":402}' 
#
_entry.id    4JOF 
#
_exptl.entry_id    4JOF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4JOF 
_cell.length_a            36.236 
_cell.length_b            47.575 
_cell.length_c            97.291 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4JOF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,G,I 1 1 
B,D,E,F,H,J 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4JOF 
_atom_sites.fract_transf_matrix[1][1]    0.027597 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021019 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010278 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 GOL B 1 401 1 GOL GOL . 
F 3 GOL B 1 402 2 GOL GOL . 
G 4 HOH A 1 401 233 HOH HOH . 
G 4 HOH A 2 402 3 HOH HOH . 
G 4 HOH A 3 403 6 HOH HOH . 
G 4 HOH A 4 404 7 HOH HOH . 
G 4 HOH A 5 405 11 HOH HOH . 
G 4 HOH A 6 406 12 HOH HOH . 
G 4 HOH A 7 407 18 HOH HOH . 
G 4 HOH A 8 408 19 HOH HOH . 
G 4 HOH A 9 409 21 HOH HOH . 
G 4 HOH A 10 410 22 HOH HOH . 
G 4 HOH A 11 411 23 HOH HOH . 
G 4 HOH A 12 412 25 HOH HOH . 
G 4 HOH A 13 413 28 HOH HOH . 
G 4 HOH A 14 414 30 HOH HOH . 
G 4 HOH A 15 415 33 HOH HOH . 
G 4 HOH A 16 416 34 HOH HOH . 
G 4 HOH A 17 417 35 HOH HOH . 
G 4 HOH A 18 418 36 HOH HOH . 
G 4 HOH A 19 419 39 HOH HOH . 
G 4 HOH A 20 420 40 HOH HOH . 
G 4 HOH A 21 421 41 HOH HOH . 
G 4 HOH A 22 422 42 HOH HOH . 
G 4 HOH A 23 423 45 HOH HOH . 
G 4 HOH A 24 424 47 HOH HOH . 
G 4 HOH A 25 425 48 HOH HOH . 
G 4 HOH A 26 426 49 HOH HOH . 
G 4 HOH A 27 427 50 HOH HOH . 
G 4 HOH A 28 428 51 HOH HOH . 
G 4 HOH A 29 429 55 HOH HOH . 
G 4 HOH A 30 430 57 HOH HOH . 
G 4 HOH A 31 431 58 HOH HOH . 
G 4 HOH A 32 432 59 HOH HOH . 
G 4 HOH A 33 433 60 HOH HOH . 
G 4 HOH A 34 434 61 HOH HOH . 
G 4 HOH A 35 435 65 HOH HOH . 
G 4 HOH A 36 436 66 HOH HOH . 
G 4 HOH A 37 437 67 HOH HOH . 
G 4 HOH A 38 438 68 HOH HOH . 
G 4 HOH A 39 439 72 HOH HOH . 
G 4 HOH A 40 440 73 HOH HOH . 
G 4 HOH A 41 441 75 HOH HOH . 
G 4 HOH A 42 442 82 HOH HOH . 
G 4 HOH A 43 443 83 HOH HOH . 
G 4 HOH A 44 444 84 HOH HOH . 
G 4 HOH A 45 445 85 HOH HOH . 
G 4 HOH A 46 446 87 HOH HOH . 
G 4 HOH A 47 447 88 HOH HOH . 
G 4 HOH A 48 448 89 HOH HOH . 
G 4 HOH A 49 449 91 HOH HOH . 
G 4 HOH A 50 450 94 HOH HOH . 
G 4 HOH A 51 451 97 HOH HOH . 
G 4 HOH A 52 452 99 HOH HOH . 
G 4 HOH A 53 453 101 HOH HOH . 
G 4 HOH A 54 454 103 HOH HOH . 
G 4 HOH A 55 455 104 HOH HOH . 
G 4 HOH A 56 456 106 HOH HOH . 
G 4 HOH A 57 457 110 HOH HOH . 
G 4 HOH A 58 458 115 HOH HOH . 
G 4 HOH A 59 459 117 HOH HOH . 
G 4 HOH A 60 460 118 HOH HOH . 
G 4 HOH A 61 461 119 HOH HOH . 
G 4 HOH A 62 462 120 HOH HOH . 
G 4 HOH A 63 463 121 HOH HOH . 
G 4 HOH A 64 464 123 HOH HOH . 
G 4 HOH A 65 465 130 HOH HOH . 
G 4 HOH A 66 466 134 HOH HOH . 
G 4 HOH A 67 467 136 HOH HOH . 
G 4 HOH A 68 468 138 HOH HOH . 
G 4 HOH A 69 469 139 HOH HOH . 
G 4 HOH A 70 470 141 HOH HOH . 
G 4 HOH A 71 471 147 HOH HOH . 
G 4 HOH A 72 472 151 HOH HOH . 
G 4 HOH A 73 473 153 HOH HOH . 
G 4 HOH A 74 474 154 HOH HOH . 
G 4 HOH A 75 475 155 HOH HOH . 
G 4 HOH A 76 476 156 HOH HOH . 
G 4 HOH A 77 477 158 HOH HOH . 
G 4 HOH A 78 478 159 HOH HOH . 
G 4 HOH A 79 479 161 HOH HOH . 
G 4 HOH A 80 480 162 HOH HOH . 
G 4 HOH A 81 481 163 HOH HOH . 
G 4 HOH A 82 482 164 HOH HOH . 
G 4 HOH A 83 483 166 HOH HOH . 
G 4 HOH A 84 484 167 HOH HOH . 
G 4 HOH A 85 485 168 HOH HOH . 
G 4 HOH A 86 486 169 HOH HOH . 
G 4 HOH A 87 487 173 HOH HOH . 
G 4 HOH A 88 488 174 HOH HOH . 
G 4 HOH A 89 489 179 HOH HOH . 
G 4 HOH A 90 490 182 HOH HOH . 
G 4 HOH A 91 491 183 HOH HOH . 
G 4 HOH A 92 492 185 HOH HOH . 
G 4 HOH A 93 493 187 HOH HOH . 
G 4 HOH A 94 494 188 HOH HOH . 
G 4 HOH A 95 495 189 HOH HOH . 
G 4 HOH A 96 496 190 HOH HOH . 
G 4 HOH A 97 497 193 HOH HOH . 
G 4 HOH A 98 498 195 HOH HOH . 
G 4 HOH A 99 499 198 HOH HOH . 
G 4 HOH A 100 500 199 HOH HOH . 
G 4 HOH A 101 501 202 HOH HOH . 
G 4 HOH A 102 502 210 HOH HOH . 
G 4 HOH A 103 503 214 HOH HOH . 
G 4 HOH A 104 504 217 HOH HOH . 
G 4 HOH A 105 505 219 HOH HOH . 
G 4 HOH A 106 506 222 HOH HOH . 
G 4 HOH A 107 507 224 HOH HOH . 
G 4 HOH A 108 508 225 HOH HOH . 
G 4 HOH A 109 509 227 HOH HOH . 
G 4 HOH A 110 510 228 HOH HOH . 
G 4 HOH A 111 511 229 HOH HOH . 
H 4 HOH B 1 501 8 HOH HOH . 
H 4 HOH B 2 502 9 HOH HOH . 
H 4 HOH B 3 503 10 HOH HOH . 
H 4 HOH B 4 504 13 HOH HOH . 
H 4 HOH B 5 505 14 HOH HOH . 
H 4 HOH B 6 506 15 HOH HOH . 
H 4 HOH B 7 507 16 HOH HOH . 
H 4 HOH B 8 508 17 HOH HOH . 
H 4 HOH B 9 509 24 HOH HOH . 
H 4 HOH B 10 510 26 HOH HOH . 
H 4 HOH B 11 511 27 HOH HOH . 
H 4 HOH B 12 512 29 HOH HOH . 
H 4 HOH B 13 513 31 HOH HOH . 
H 4 HOH B 14 514 32 HOH HOH . 
H 4 HOH B 15 515 37 HOH HOH . 
H 4 HOH B 16 516 38 HOH HOH . 
H 4 HOH B 17 517 43 HOH HOH . 
H 4 HOH B 18 518 44 HOH HOH . 
H 4 HOH B 19 519 46 HOH HOH . 
H 4 HOH B 20 520 53 HOH HOH . 
H 4 HOH B 21 521 54 HOH HOH . 
H 4 HOH B 22 522 56 HOH HOH . 
H 4 HOH B 23 523 62 HOH HOH . 
H 4 HOH B 24 524 64 HOH HOH . 
H 4 HOH B 25 525 69 HOH HOH . 
H 4 HOH B 26 526 70 HOH HOH . 
H 4 HOH B 27 527 71 HOH HOH . 
H 4 HOH B 28 528 74 HOH HOH . 
H 4 HOH B 29 529 76 HOH HOH . 
H 4 HOH B 30 530 77 HOH HOH . 
H 4 HOH B 31 531 78 HOH HOH . 
H 4 HOH B 32 532 79 HOH HOH . 
H 4 HOH B 33 533 80 HOH HOH . 
H 4 HOH B 34 534 81 HOH HOH . 
H 4 HOH B 35 535 86 HOH HOH . 
H 4 HOH B 36 536 90 HOH HOH . 
H 4 HOH B 37 537 92 HOH HOH . 
H 4 HOH B 38 538 95 HOH HOH . 
H 4 HOH B 39 539 96 HOH HOH . 
H 4 HOH B 40 540 102 HOH HOH . 
H 4 HOH B 41 541 105 HOH HOH . 
H 4 HOH B 42 542 108 HOH HOH . 
H 4 HOH B 43 543 109 HOH HOH . 
H 4 HOH B 44 544 112 HOH HOH . 
H 4 HOH B 45 545 113 HOH HOH . 
H 4 HOH B 46 546 114 HOH HOH . 
H 4 HOH B 47 547 124 HOH HOH . 
H 4 HOH B 48 548 125 HOH HOH . 
H 4 HOH B 49 549 126 HOH HOH . 
H 4 HOH B 50 550 127 HOH HOH . 
H 4 HOH B 51 551 129 HOH HOH . 
H 4 HOH B 52 552 131 HOH HOH . 
H 4 HOH B 53 553 132 HOH HOH . 
H 4 HOH B 54 554 135 HOH HOH . 
H 4 HOH B 55 555 137 HOH HOH . 
H 4 HOH B 56 556 140 HOH HOH . 
H 4 HOH B 57 557 142 HOH HOH . 
H 4 HOH B 58 558 143 HOH HOH . 
H 4 HOH B 59 559 144 HOH HOH . 
H 4 HOH B 60 560 145 HOH HOH . 
H 4 HOH B 61 561 148 HOH HOH . 
H 4 HOH B 62 562 149 HOH HOH . 
H 4 HOH B 63 563 150 HOH HOH . 
H 4 HOH B 64 564 152 HOH HOH . 
H 4 HOH B 65 565 160 HOH HOH . 
H 4 HOH B 66 566 170 HOH HOH . 
H 4 HOH B 67 567 171 HOH HOH . 
H 4 HOH B 68 568 172 HOH HOH . 
H 4 HOH B 69 569 175 HOH HOH . 
H 4 HOH B 70 570 176 HOH HOH . 
H 4 HOH B 71 571 177 HOH HOH . 
H 4 HOH B 72 572 178 HOH HOH . 
H 4 HOH B 73 573 180 HOH HOH . 
H 4 HOH B 74 574 181 HOH HOH . 
H 4 HOH B 75 575 184 HOH HOH . 
H 4 HOH B 76 576 186 HOH HOH . 
H 4 HOH B 77 577 191 HOH HOH . 
H 4 HOH B 78 578 192 HOH HOH . 
H 4 HOH B 79 579 194 HOH HOH . 
H 4 HOH B 80 580 196 HOH HOH . 
H 4 HOH B 81 581 197 HOH HOH . 
H 4 HOH B 82 582 200 HOH HOH . 
H 4 HOH B 83 583 203 HOH HOH . 
H 4 HOH B 84 584 205 HOH HOH . 
H 4 HOH B 85 585 207 HOH HOH . 
H 4 HOH B 86 586 208 HOH HOH . 
H 4 HOH B 87 587 209 HOH HOH . 
H 4 HOH B 88 588 211 HOH HOH . 
H 4 HOH B 89 589 212 HOH HOH . 
H 4 HOH B 90 590 213 HOH HOH . 
H 4 HOH B 91 591 215 HOH HOH . 
H 4 HOH B 92 592 216 HOH HOH . 
H 4 HOH B 93 593 218 HOH HOH . 
H 4 HOH B 94 594 220 HOH HOH . 
H 4 HOH B 95 595 221 HOH HOH . 
H 4 HOH B 96 596 223 HOH HOH . 
H 4 HOH B 97 597 232 HOH HOH . 
I 4 HOH C 1 101 234 HOH HOH . 
I 4 HOH C 2 102 4 HOH HOH . 
I 4 HOH C 3 103 5 HOH HOH . 
I 4 HOH C 4 104 63 HOH HOH . 
I 4 HOH C 5 105 98 HOH HOH . 
I 4 HOH C 6 106 122 HOH HOH . 
I 4 HOH C 7 107 128 HOH HOH . 
I 4 HOH C 8 108 133 HOH HOH . 
I 4 HOH C 9 109 146 HOH HOH . 
I 4 HOH C 10 110 165 HOH HOH . 
I 4 HOH C 11 111 201 HOH HOH . 
J 4 HOH D 1 101 20 HOH HOH . 
J 4 HOH D 2 102 52 HOH HOH . 
J 4 HOH D 3 103 93 HOH HOH . 
J 4 HOH D 4 104 100 HOH HOH . 
J 4 HOH D 5 105 107 HOH HOH . 
J 4 HOH D 6 106 111 HOH HOH . 
J 4 HOH D 7 107 116 HOH HOH . 
J 4 HOH D 8 108 157 HOH HOH . 
J 4 HOH D 9 109 206 HOH HOH . 
J 4 HOH D 10 110 230 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 3 -2.86 14.744 32.166 1 13.75 ? C1 GOL 402 B 1 
HETATM 2 O O1 GOL . . . F 3 -3.723 15.862 32.112 1 16.12 ? O1 GOL 402 B 1 
HETATM 3 C C2 GOL . . . F 3 -3.529 13.541 32.821 1 18.09 ? C2 GOL 402 B 1 
HETATM 4 O O2 GOL . . . F 3 -4.77 13.249 32.196 1 13.17 ? O2 GOL 402 B 1 
HETATM 5 C C3 GOL . . . F 3 -2.557 12.387 32.599 1 23.58 ? C3 GOL 402 B 1 
HETATM 6 O O3 GOL . . . F 3 -2.799 11.335 33.499 1 31.33 ? O3 GOL 402 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           333 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#